Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0304271 Helianthus annuus HOM05D000329 ORTHO05D000833 9.6e-107 390.2 200 100.0
HanXRQChr17g0533711 Helianthus annuus HOM05D000329 ORTHO05D000833 9.7e-91 337.0 190 91.6
ECA246G1250 Erigeron canadensis HOM05D000329 ORTHO05D000833 2.0e-59 233.0 190 67.4
Lsat_1_v5_gn_3_7360 Lactuca sativa HOM05D000329 ORTHO05D000833 1.7e-58 229.9 190 65.3
Dinv38948 Davidia involucrata HOM05D000329 ORTHO05D000833 7.0e-49 198.0 190 55.8
CSS0031193 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D000833 1.7e-42 176.8 187 51.9
Lj2A191G51 Lonicera japonica HOM05D000329 ORTHO05D000833 8.3e-42 174.5 187 50.8
Actinidia02012 Actinidia chinensis HOM05D000329 ORTHO05D000833 2.0e-40 169.9 189 49.2
Thecc.03G277900 Theobroma cacao HOM05D000329 ORTHO05D000833 1.1e-38 164.1 184 48.4
Rhsim02G0228800 Rhododendron simsii HOM05D000329 ORTHO05D000833 7.3e-38 161.4 190 48.4
GSVIVG01019761001 Vitis vinifera HOM05D000329 ORTHO05D000833 1.2e-37 160.6 186 47.8
Potri.003G126600 Populus trichocarpa HOM05D000329 ORTHO05D000833 3.0e-36 156.0 192 47.9
vmacro11324 Vaccinium macrocarpon HOM05D000329 ORTHO05D000833 4.0e-36 155.6 187 46.5
QL12p033243 Quercus lobata HOM05D000329 ORTHO05D000833 6.8e-36 154.8 188 46.8
Cc08_g14660 Coffea canephora HOM05D000329 ORTHO05D000833 4.4e-35 152.1 187 43.9
Duzib068G0085 Durio zibethinus HOM05D000329 ORTHO05D000833 5.8e-35 151.8 179 46.9
CAN.G774.26 Capsicum annuum HOM05D000329 ORTHO05D000833 9.8e-35 151.0 188 43.6
Gohir.D08G200900 Gossypium hirsutum HOM05D000329 ORTHO05D000833 1.3e-34 150.6 179 46.4
Prupe.5G099000 Prunus persica HOM05D000329 ORTHO05D000833 2.2e-34 149.8 184 45.1
Sabra03G0089600 Salix brachista HOM05D000329 ORTHO05D000833 4.9e-34 148.7 189 44.4
TAR636G0974 Trochodendron aralioides HOM05D000329 ORTHO05D000833 4.9e-34 148.7 190 44.7
Oeu009171.4 Olea europaea HOM05D000329 ORTHO05D000833 6.4e-34 148.3 184 45.7
MD06G1081900 Malus domestica HOM05D000329 ORTHO05D000833 8.3e-34 147.9 187 46.5
Solyc08g081000.3 Solanum lycopersicum HOM05D000329 ORTHO05D000833 1.1e-33 147.5 188 42.6
FvH4_5g02310 Fragaria vesca HOM05D000329 ORTHO05D000833 1.4e-33 147.1 187 43.3
FAN18G0976 Fragaria x ananassa HOM05D000329 ORTHO05D000833 1.4e-33 147.1 187 43.3
FAN13G2110 Fragaria x ananassa HOM05D000329 ORTHO05D000833 1.8e-33 146.7 187 43.9
arahy.Tifrunner.gnm1.ann1.AJP7R9 Arachis hypogaea HOM05D000329 ORTHO05D000833 2.4e-33 146.4 190 44.2
Nitab4.5_0003441g0110 Nicotiana tabacum HOM05D000329 ORTHO05D000833 4.1e-33 145.6 187 41.7
FAN04G0379 Fragaria x ananassa HOM05D000329 ORTHO05D000833 7.0e-33 144.8 187 42.8
RcHm_v2.0_Chr7g0197841 Rosa chinensis HOM05D000329 ORTHO05D000833 7.0e-33 144.8 187 43.3
arahy.Tifrunner.gnm1.ann1.6V6FMV Arachis hypogaea HOM05D000329 ORTHO05D000833 1.6e-32 143.7 190 43.7
Sopen08g029320 Solanum pennellii HOM05D000329 ORTHO05D000833 1.6e-32 143.7 188 42.0
Peaxi162Scf00119g00838 Petunia axillaris HOM05D000329 ORTHO05D000833 2.7e-32 142.9 193 40.4
COL.COLO4_34455 Corchorus olitorius HOM05D000329 ORTHO05D000833 3.5e-32 142.5 177 44.6
Gohir.A08G182350 Gossypium hirsutum HOM05D000329 ORTHO05D000833 3.5e-32 142.5 179 44.7
Cpa.g.sc74.30 Carica papaya HOM05D000003 ORTHO05D000006 1.0e-31 141.0 188 42.0
FAN08G1575 Fragaria x ananassa HOM05D000329 ORTHO05D000833 1.0e-31 141.0 187 41.7
CiPaw.12G093800 Carya illinoinensis HOM05D000329 ORTHO05D000833 1.7e-31 140.2 184 43.5
TWI81G0989 Tripterygium wilfordii HOM05D000329 ORTHO05D000833 1.7e-31 140.2 196 45.9
Sed0005725 Sechium edule HOM05D000329 ORTHO05D000833 3.9e-31 139.0 187 41.2
Gorai.004G211700 Gossypium raimondii HOM05D000329 ORTHO05D000833 5.0e-31 138.7 205 40.5
Haze_08848 Corylus avellana HOM05D000329 ORTHO05D000833 6.6e-31 138.3 184 42.9
MD14G1103700 Malus domestica HOM05D000329 ORTHO05D000833 2.5e-30 136.3 187 43.9
LjContig00312_ERROPOS870357g0009147 Lotus japonicus HOM05D000329 ORTHO05D000833 9.5e-30 134.4 187 42.2
MSTRG.13841 Avicennia marina HOM05D000329 ORTHO05D000833 8.0e-29 131.3 190 41.6
Ciclev10018462m.g Citrus clementina HOM05D000329 ORTHO05D000833 8.0e-29 131.3 187 39.6
Cfa012174 Carpinus fangiana HOM05D000329 ORTHO05D000833 3.1e-28 129.4 184 41.8
Migut.E01096 Erythranthe guttata HOM05D000329 ORTHO05D000833 3.1e-28 129.4 184 40.8
Nn1g01495 Nelumbo nucifera HOM05D000329 ORTHO05D000833 3.1e-28 129.4 187 38.5
TPR.G6625 Trifolium pratense HOM05D000329 ORTHO05D000833 6.8e-28 128.3 187 40.1
VMungo1215G1167 Vigna mungo HOM05D000329 ORTHO05D000833 1.5e-27 127.1 187 38.5
AUR62010670 Chenopodium quinoa HOM05D000329 ORTHO05D000833 2.0e-27 126.7 184 39.7
Glyma.11G023700 Glycine max HOM05D000329 ORTHO05D000833 3.4e-27 125.9 187 40.1
Actinidia14555 Actinidia chinensis HOM05D000329 ORTHO05D000833 5.8e-27 125.2 189 43.4
Ca_24553_v3 Cicer arietinum L. HOM05D000329 ORTHO05D000833 5.8e-27 125.2 187 40.6
AUR62017213 Chenopodium quinoa HOM05D000329 ORTHO05D000833 7.5e-27 124.8 187 37.4
DCAR_006743 Daucus carota HOM05D000329 ORTHO05D000833 9.8e-27 124.4 191 37.7
Glyma.01G219800 Glycine max HOM05D000329 ORTHO05D000833 9.8e-27 124.4 187 39.6
Sc01g0009540 Simmondsia chinensis HOM05D000329 ORTHO05D000833 1.3e-26 124.0 191 40.3
ClCG01G002770 Citrullus lanatus HOM05D000329 ORTHO05D000833 2.9e-26 122.9 184 38.6
MELO3C005670.2 Cucumis melo HOM05D000329 ORTHO05D000833 2.9e-26 122.9 184 38.0
Phvul.002G157500 Phaseolus vulgaris HOM05D000329 ORTHO05D000833 3.7e-26 122.5 187 38.0
THA.LOC104818027 Tarenaya hassleriana HOM05D000329 ORTHO05D000833 4.9e-26 122.1 189 35.4
Eucgr.D01851 Eucalyptus grandis HOM05D000329 ORTHO05D000833 1.4e-25 120.6 187 38.0
Medtr5g010300 Medicago truncatula HOM05D000329 ORTHO05D000833 1.4e-25 120.6 187 39.0
SGA_v2.0_scaffold144G35947 Striga asiatica HOM05D000329 ORTHO05D000833 1.4e-25 120.6 187 39.6
EL10Ac5g13077 Beta vulgaris HOM05D000329 ORTHO05D000833 2.4e-25 119.8 179 39.1
Lalb_Chr09g0321021 Lupinus albus HOM05D000329 ORTHO05D000833 3.2e-25 119.4 187 38.5
CsaV3_5G002860 Cucumis sativus L. HOM05D000329 ORTHO05D000833 1.2e-24 117.5 184 38.0
ATR0680G104 Amborella trichopoda HOM05D000329 ORTHO05D000833 2.0e-24 116.7 194 36.6
Psat2g182320 Pisum sativum HOM05D000329 ORTHO05D000833 2.0e-24 116.7 187 36.9
Manes.01G061050 Manihot esculenta HOM05D000329 ORTHO05D000833 2.7e-24 116.3 190 37.9
Hund14803 Selenicereus undatus HOM05D000329 ORTHO05D000833 2.7e-24 116.3 187 35.3
Carub.0002s0137 Capsella rubella HOM05D000329 ORTHO05D000833 4.6e-24 115.5 186 36.6
Aa31LG2G810 Aethionema arabicum HOM05D000329 ORTHO05D000833 3.9e-23 112.5 175 36.0
C09p16350 Brassica napus HOM05D000329 ORTHO05D000833 1.9e-22 110.2 186 34.4
BolC9t54546H Brassica oleracea HOM05D000329 ORTHO05D000833 1.9e-22 110.2 186 34.4
AL2G11730 Arabidopsis lyrata HOM05D000329 ORTHO05D000833 2.5e-22 109.8 186 34.4
A09p13680 Brassica napus HOM05D000329 ORTHO05D000833 3.3e-22 109.4 186 34.4
BraA09t37021Z Brassica rapa HOM05D000329 ORTHO05D000833 3.3e-22 109.4 186 34.4
PGR031G0355 Punica granatum HOM05D000329 ORTHO05D000833 3.3e-22 109.4 184 37.0
AT1G63490 Arabidopsis thaliana HOM05D000329 ORTHO05D000833 4.3e-22 109.0 186 33.3
Thhalv10023217m.g Eutrema salsugineum HOM05D000329 ORTHO05D000833 9.5e-22 107.8 186 33.3
CDE06G0648 Ceratophyllum demersum HOM05D000329 ORTHO05D000833 3.1e-20 102.8 190 33.7
PSO302G0151 Papaver somniferum HOM05D000329 ORTHO05D000833 8.9e-20 101.3 191 35.1
Aqoxy5G04007 Aquilegia oxysepala HOM05D000329 ORTHO05D000833 2.6e-19 99.8 191 32.5
PSO210G7657 Papaver somniferum HOM05D000329 ORTHO05D000833 2.6e-19 99.8 191 35.1
Atru.chr9.2249 Acer truncatum HOM05D000329 ORTHO05D000833 7.5e-19 98.2 147 38.8
CARHR047880 Cardamine hirsuta HOM05D000329 ORTHO05D000833 9.9e-19 97.8 180 33.9
Ah.12g057000 Amaranthus hybridus HOM05D000329 ORTHO05D000833 3.5e-16 89.4 187 31.0
SEGI_23393 Sequoiadendron giganteum HOM05D000329 ORTHO05D000833 5.6e-14 82.0 195 28.7
TAR636G3626 Trochodendron aralioides HOM05D000329 ORTHO05D000833 9.5e-14 81.3 129 41.1
Zm00001eb229050 Zea mays HOM05D000329 ORTHO05D000833 5.2e-12 75.5 188 29.8
Sp2g01130 Schrenkiella parvula HOM05D000329 ORTHO05D000833 1.3e-07 60.8 58 46.6
MBI17_g28345_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D000833 1.1e-06 57.8 114 30.7


User provided reference genes

Program Settings