Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 7.8e-50 200.3 110 100.0
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 4.6e-42 174.5 105 92.4
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 2.4e-22 109.0 110 61.8
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 2.4e-22 109.0 106 62.3
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 5.2e-22 107.8 109 59.6
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 1.5e-21 106.3 109 58.7
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.0e-21 105.9 120 56.7
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.0e-21 105.9 120 56.7
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 2.6e-21 105.5 110 60.0
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 2.6e-21 105.5 110 61.8
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 2.6e-21 105.5 107 59.8
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 7.6e-21 104.0 111 55.9
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.3e-20 103.2 108 60.2
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 4.9e-20 101.3 107 57.9
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 4.9e-20 101.3 110 56.4
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 4.9e-20 101.3 110 53.6
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.1e-19 100.1 106 57.5
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 1.1e-19 100.1 105 59.0
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 1.1e-19 100.1 112 56.2
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 1.1e-19 100.1 110 55.5
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 1.4e-19 99.8 105 55.2
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 1.4e-19 99.8 61 83.6
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 2.4e-19 99.0 106 56.6
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 3.2e-19 98.6 106 55.7
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 4.1e-19 98.2 110 54.5
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 5.4e-19 97.8 112 59.8
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 5.4e-19 97.8 109 53.2
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 5.4e-19 97.8 110 56.4
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 7.1e-19 97.4 109 57.8
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 9.2e-19 97.1 114 52.6
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 1.2e-18 96.7 103 59.2
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 1.6e-18 96.3 96 57.3
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 2.1e-18 95.9 84 67.9
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 2.7e-18 95.5 114 52.6
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 2.7e-18 95.5 114 52.6
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 2.7e-18 95.5 106 55.7
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 2.7e-18 95.5 112 53.6
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 2.7e-18 95.5 112 53.6
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 3.5e-18 95.1 107 56.1
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 3.5e-18 95.1 106 55.7
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 4.6e-18 94.7 109 56.0
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 4.6e-18 94.7 106 52.8
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 6.0e-18 94.4 86 64.0
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 7.8e-18 94.0 116 53.4
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 1.7e-17 92.8 112 50.0
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 1.7e-17 92.8 111 56.8
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.7e-17 92.8 111 50.5
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 2.3e-17 92.4 112 51.8
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 3.0e-17 92.0 110 49.1
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 3.0e-17 92.0 106 52.8
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 3.0e-17 92.0 84 61.9
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 3.9e-17 91.7 110 50.9
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 3.9e-17 91.7 106 52.8
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 5.1e-17 91.3 109 52.3
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 5.1e-17 91.3 99 59.6
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 5.1e-17 91.3 119 52.1
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 6.6e-17 90.9 107 52.3
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 6.6e-17 90.9 110 55.5
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 6.6e-17 90.9 115 51.3
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 8.7e-17 90.5 108 50.0
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 8.7e-17 90.5 108 53.7
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 8.7e-17 90.5 106 50.9
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 1.1e-16 90.1 109 51.4
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.1e-16 90.1 109 51.4
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.1e-16 90.1 118 52.5
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 1.1e-16 90.1 118 52.5
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 1.5e-16 89.7 88 58.0
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 1.5e-16 89.7 111 52.3
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 1.5e-16 89.7 110 51.8
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 1.9e-16 89.4 62 79.0
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 1.9e-16 89.4 111 52.3
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 1.9e-16 89.4 110 49.1
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 2.5e-16 89.0 112 50.0
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 2.5e-16 89.0 124 54.0
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 2.5e-16 89.0 64 76.6
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 4.3e-16 88.2 112 51.8
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 4.3e-16 88.2 110 49.1
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 4.3e-16 88.2 120 54.2
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.3e-16 88.2 67 65.7
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 4.3e-16 88.2 108 52.8
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 7.3e-16 87.4 108 52.8
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 9.6e-16 87.0 132 46.2
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 9.6e-16 87.0 107 51.4
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 1.6e-15 86.3 113 52.2
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 2.8e-15 85.5 108 52.8
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 2.8e-15 85.5 110 55.5
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 3.6e-15 85.1 108 52.8
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 3.6e-15 85.1 108 50.0
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 6.2e-15 84.3 112 48.2
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 6.2e-15 84.3 107 51.4
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 1.1e-14 83.6 79 59.5
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 1.1e-14 83.6 74 63.5
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 1.4e-14 83.2 75 61.3
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 1.4e-14 83.2 107 48.6
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 1.8e-14 82.8 76 60.5
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 2.4e-14 82.4 119 50.4
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 5.2e-14 81.3 79 59.5
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 6.9e-14 80.9 83 59.0
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 6.9e-14 80.9 111 52.3
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 9.0e-14 80.5 99 51.5
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 9.0e-14 80.5 90 53.3
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 2.0e-13 79.3 115 47.0
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 2.6e-13 79.0 64 65.6
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 2.6e-13 79.0 131 45.0
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.6e-13 79.0 101 49.5
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 3.4e-13 78.6 117 46.2
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 3.4e-13 78.6 87 54.0
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 4.4e-13 78.2 97 50.5
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 5.8e-13 77.8 92 50.0
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 5.8e-13 77.8 120 46.7
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 5.8e-13 77.8 96 50.0
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 7.6e-13 77.4 117 46.2
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 7.6e-13 77.4 117 46.2
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 9.9e-13 77.0 108 46.3
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 9.9e-13 77.0 115 46.1
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 2.2e-12 75.9 118 48.3
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 2.9e-12 75.5 75 57.3
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 3.8e-12 75.1 64 62.5
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 3.8e-12 75.1 109 46.8
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 4.9e-12 74.7 66 62.1
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 4.9e-12 74.7 66 62.1
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 6.4e-12 74.3 65 53.8
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.4e-11 73.2 104 48.1
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 7.1e-11 70.9 93 50.5
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 1.2e-10 70.1 109 44.0
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 1.6e-10 69.7 65 58.5
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 1.6e-10 69.7 65 58.5
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.1e-10 69.3 95 49.5
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 4.6e-10 68.2 94 48.9
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 1.0e-09 67.0 91 45.1
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 3.0e-09 65.5 108 41.7
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 3.9e-09 65.1 82 51.2
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 5.1e-09 64.7 98 49.0
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 1.5e-08 63.2 118 35.6
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 2.5e-08 62.4 100 44.0
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 9.6e-08 60.5 108 36.1
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 1.6e-07 59.7 53 60.4
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 3.6e-07 58.5 91 38.5
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 3.6e-07 58.5 106 41.5
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 6.2e-07 57.8 108 35.2
Aa31LG9G10030 Aethionema arabicum HOM05D003850 ORTHO05D004515 8.1e-07 57.4 46 65.2
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 8.1e-07 57.4 110 47.3
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 1.1e-06 57.0 57 61.4
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.4e-06 56.6 108 35.2
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 1.8e-06 56.2 86 39.5
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 2.4e-06 55.8 84 45.2
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 2.4e-06 55.8 84 46.4
PSO339G0182 Papaver somniferum HOM05D009217 ORTHO05D009626 3.1e-06 55.5 102 40.2
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 4.0e-06 55.1 106 39.6
CBR_g38329 Chara braunii HOM05D003850 ORTHO05D004515 5.3e-06 54.7 90 38.9
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 5.3e-06 54.7 61 52.5


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