Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G120100 Gossypium raimondii HOM05D000904 ORTHO05D006931 6.5e-224 780.4 392 100.0
Gohir.D02G105700 Gossypium hirsutum HOM05D000904 ORTHO05D006931 7.2e-207 723.8 374 96.5
Gohir.A03G081600 Gossypium hirsutum HOM05D000904 ORTHO05D006931 1.8e-189 666.0 374 91.4
Duzib160G0493 Durio zibethinus HOM05D000904 ORTHO05D006931 1.5e-103 380.6 443 55.8
COL.COLO4_22855 Corchorus olitorius HOM05D000904 ORTHO05D006931 1.9e-37 161.0 168 54.2
TWI59G0191 Tripterygium wilfordii HOM05D000904 ORTHO05D006931 2.9e-30 137.1 348 33.9
Atru.chr3.2070 Acer truncatum HOM05D000904 ORTHO05D006931 3.8e-30 136.7 305 35.7
Haze_09988 Corylus avellana HOM05D000904 ORTHO05D006931 3.2e-29 133.7 225 40.0
Potri.004G228600 Populus trichocarpa HOM05D000904 ORTHO05D006931 3.2e-29 133.7 322 35.1
Cfa004448 Carpinus fangiana HOM05D000904 ORTHO05D006931 7.1e-29 132.5 225 40.0
GSVIVG01023150001 Vitis vinifera HOM05D000904 ORTHO05D006931 7.1e-29 132.5 181 42.0
Manes.10G111800 Manihot esculenta HOM05D000904 ORTHO05D006931 1.6e-28 131.3 417 32.4
Lj5A282T78 Lonicera japonica HOM05D000904 ORTHO05D006931 2.7e-28 130.6 398 32.4
CSS0030434 Camellia sinensis var. sinensis HOM05D000904 ORTHO05D006931 2.3e-27 127.5 217 38.7
Medtr2g005450 Medicago truncatula HOM05D000904 ORTHO05D006931 2.5e-26 124.0 327 33.6
Solyc01g103090.4 Solanum lycopersicum HOM05D000904 ORTHO05D006931 5.6e-26 122.9 325 33.2
Cc02_g23540 Coffea canephora HOM05D000904 ORTHO05D006931 7.3e-26 122.5 269 32.7
Dinv29628 Davidia involucrata HOM05D000904 ORTHO05D006931 1.6e-25 121.3 197 38.6
Atru.chr6.324 Acer truncatum HOM05D000904 ORTHO05D006931 3.6e-25 120.2 264 36.4
Actinidia26193 Actinidia chinensis HOM05D000904 ORTHO05D006931 3.6e-25 120.2 170 42.4
FvH4_5g28020 Fragaria vesca HOM05D000904 ORTHO05D006931 3.6e-25 120.2 420 29.8
AT1G10320 Arabidopsis thaliana HOM05D000904 ORTHO05D006931 6.2e-25 119.4 329 32.8
QL02p103277 Quercus lobata HOM05D000904 ORTHO05D006931 3.1e-24 117.1 228 36.8
CDE05G0469 Ceratophyllum demersum HOM05D000904 ORTHO05D006931 9.0e-24 115.5 88 58.0
FAN18G0255 Fragaria x ananassa HOM05D000904 ORTHO05D006931 9.0e-24 115.5 405 30.9
Psat1g223160 Pisum sativum HOM05D000904 ORTHO05D006931 9.0e-24 115.5 330 32.7
ClCG10G007430 Citrullus lanatus HOM05D000904 ORTHO05D006931 1.2e-23 115.2 119 50.4
Ca_00027_v3 Cicer arietinum L. HOM05D000904 ORTHO05D006931 2.6e-23 114.0 228 37.3
PGSC0003DMG400020705 Solanum tuberosum HOM05D000904 ORTHO05D006931 2.6e-23 114.0 359 30.9
Eucgr.G00080 Eucalyptus grandis HOM05D000904 ORTHO05D006931 3.4e-23 113.6 208 39.4
Migut.B00725 Erythranthe guttata HOM05D000904 ORTHO05D006931 7.6e-23 112.5 291 33.7
CARHR010450 Cardamine hirsuta HOM05D000904 ORTHO05D006931 9.9e-23 112.1 316 34.5
Cpa.g.sc173.41 Carica papaya HOM05D000904 ORTHO05D006931 9.9e-23 112.1 119 52.1
CAN.G855.47 Capsicum annuum HOM05D000904 ORTHO05D006931 2.2e-22 110.9 314 29.6
arahy.Tifrunner.gnm1.ann1.V0D4VX Arachis hypogaea HOM05D000904 ORTHO05D006931 2.9e-22 110.5 256 37.5
BcaNung05228 Brassica carinata HOM05D000904 ORTHO05D006931 2.9e-22 110.5 231 39.4
Nitab4.5_0004668g0060 Nicotiana tabacum HOM05D000904 ORTHO05D006931 2.9e-22 110.5 420 31.2
Lj5g0025119 Lotus japonicus HOM05D000904 ORTHO05D006931 3.8e-22 110.2 379 30.6
Ciclev10024033m.g Citrus clementina HOM05D000904 ORTHO05D006931 4.9e-22 109.8 137 48.9
Peaxi162Scf00011g01832 Petunia axillaris HOM05D000904 ORTHO05D006931 4.9e-22 109.8 435 29.7
AL1G21050 Arabidopsis lyrata HOM05D000904 ORTHO05D006931 6.4e-22 109.4 322 31.4
MD15G1442300 Malus domestica HOM05D000904 ORTHO05D006931 6.4e-22 109.4 365 30.7
RcHm_v2.0_Chr7g0221391 Rosa chinensis HOM05D000904 ORTHO05D006931 6.4e-22 109.4 82 58.5
DCAR_001720 Daucus carota HOM05D000904 ORTHO05D006931 8.4e-22 109.0 335 31.6
Lalb_Chr20g0123821 Lupinus albus HOM05D000904 ORTHO05D006931 8.4e-22 109.0 162 40.7
RcHm_v2.0_Chr6g0272531 Rosa chinensis HOM05D000904 ORTHO05D006931 8.4e-22 109.0 309 31.1
TAR628G1213 Trochodendron aralioides HOM05D000904 ORTHO05D006931 1.1e-21 108.6 404 30.0
Ciclev10003415m.g Citrus clementina HOM05D000904 ORTHO05D006931 1.4e-21 108.2 328 34.5
MD05G1263000 Malus domestica HOM05D000904 ORTHO05D006931 2.4e-21 107.5 76 60.5
PSO063G1559 Papaver somniferum HOM05D000904 ORTHO05D006931 2.4e-21 107.5 241 34.9
Prupe.1G585000 Prunus persica HOM05D000904 ORTHO05D006931 2.4e-21 107.5 258 32.6
Nn5g27250 Nelumbo nucifera HOM05D000904 ORTHO05D006931 3.2e-21 107.1 388 29.6
Sopen01g045500 Solanum pennellii HOM05D000904 ORTHO05D006931 3.2e-21 107.1 421 29.0
VMungo0540G1910 Vigna mungo HOM05D000904 ORTHO05D006931 3.2e-21 107.1 324 33.3
SGA_v2.0_scaffold131G34405 Striga asiatica HOM05D000904 ORTHO05D006931 4.2e-21 106.7 369 30.6
arahy.Tifrunner.gnm1.ann1.AE80VE Arachis hypogaea HOM05D000904 ORTHO05D006931 5.4e-21 106.3 293 34.5
BolC8t48998H Brassica oleracea HOM05D000904 ORTHO05D005281 9.3e-21 105.5 324 34.0
CiPaw.05G001900 Carya illinoinensis HOM05D000904 ORTHO05D006931 9.3e-21 105.5 237 36.7
THA.LOC104810192 Tarenaya hassleriana HOM05D000904 ORTHO05D006931 9.3e-21 105.5 395 30.6
BcaNung05166 Brassica carinata HOM05D000904 ORTHO05D006931 1.6e-20 104.8 324 34.0
C08p13580 Brassica napus HOM05D000904 ORTHO05D006931 1.6e-20 104.8 324 34.0
Thhalv10009354m.g Eutrema salsugineum HOM05D000904 ORTHO05D006931 2.1e-20 104.4 251 35.9
Glyma.15G244700 Glycine max HOM05D000904 ORTHO05D006931 3.5e-20 103.6 88 60.2
arahy.Tifrunner.gnm1.ann1.7BJ6UQ Arachis hypogaea HOM05D000904 ORTHO05D006931 4.6e-20 103.2 254 34.6
vmacro19831 Vaccinium macrocarpon HOM05D000904 ORTHO05D006931 7.8e-20 102.4 341 30.5
Ciclev10010745m.g Citrus clementina HOM05D000904 ORTHO05D006931 1.3e-19 101.7 136 47.8
ECA240G4408 Erigeron canadensis HOM05D000904 ORTHO05D006931 1.3e-19 101.7 279 33.0
Hund00892 Selenicereus undatus HOM05D000904 ORTHO05D006931 1.3e-19 101.7 384 28.9
Nitab4.5_0008306g0010 Nicotiana tabacum HOM05D000904 ORTHO05D006931 2.3e-19 100.9 410 28.8
Aa31LG1G4600 Aethionema arabicum HOM05D000904 ORTHO05D006931 3.0e-19 100.5 173 37.0
A08p34030 Brassica napus HOM05D000904 ORTHO05D006931 3.9e-19 100.1 322 30.4
BraA08t35316Z Brassica rapa HOM05D000904 ORTHO05D005281 3.9e-19 100.1 322 30.4
Phvul.006G221300 Phaseolus vulgaris HOM05D000904 ORTHO05D006931 8.7e-19 99.0 238 36.1
HPP92_011424 Vanilla planifolia HOM05D000904 ORTHO05D006931 1.1e-18 98.6 130 42.3
Carub.0001s0973 Capsella rubella HOM05D000904 ORTHO05D006931 5.6e-18 96.3 366 29.2
Glyma.08G162800 Glycine max HOM05D000904 ORTHO05D006931 5.6e-18 96.3 251 35.5
Lsat_1_v5_gn_9_121820 Lactuca sativa HOM05D000904 ORTHO05D006931 5.6e-18 96.3 189 33.9
unitig_578.g15961 Utricularia gibba HOM05D000904 ORTHO05D006931 5.6e-18 96.3 108 46.3
HanXRQChr12g0381671 Helianthus annuus HOM05D000904 ORTHO05D006931 9.6e-18 95.5 258 32.2
Sp1g08920 Schrenkiella parvula HOM05D000904 ORTHO05D006931 9.6e-18 95.5 347 32.9
Oeu043612.1 Olea europaea HOM05D000904 ORTHO05D006931 1.3e-17 95.1 391 28.4
Sc06g0007800 Simmondsia chinensis HOM05D000904 ORTHO05D006931 1.6e-17 94.7 309 28.2
Ciclev10029935m.g Citrus clementina HOM05D000904 ORTHO05D006931 1.1e-16 92.0 58 72.4
TPR.G2096 Trifolium pratense HOM05D000904 ORTHO05D006931 1.4e-16 91.7 384 29.7
MELO3C016469.2 Cucumis melo HOM05D000904 ORTHO05D006931 2.4e-16 90.9 353 29.5
AUR62033228 Chenopodium quinoa HOM05D000904 ORTHO05D006931 3.1e-16 90.5 392 30.6
PSO421G0485 Papaver somniferum HOM05D000904 ORTHO05D006931 3.1e-16 90.5 303 29.0
HPP92_011434 Vanilla planifolia HOM05D000904 ORTHO05D006931 4.0e-16 90.1 273 30.4
MBI19_g32709_MAGBIO Magnolia biondii HOM05D000904 ORTHO05D006931 5.3e-16 89.7 416 30.3
Sed0005680 Sechium edule HOM05D000904 ORTHO05D006931 5.3e-16 89.7 420 27.9
CANSAT01G3012 Cannabis sativa HOM05D000904 ORTHO05D006931 1.2e-15 88.6 310 30.3
Aqoxy6G00043 Aquilegia oxysepala HOM05D000904 ORTHO05D006931 2.6e-15 87.4 386 29.3
A06p06970 Brassica napus HOM05D000904 ORTHO05D006931 3.4e-15 87.0 247 32.8
Pp3c3_25240 Physcomitrium patens HOM05D000904 ORTHO05D006931 7.6e-15 85.9 78 50.0
Os02g0557500 Oryza sativa ssp. japonica HOM05D000904 ORTHO05D006931 1.3e-14 85.1 324 27.5
AUR62021311 Chenopodium quinoa HOM05D000904 ORTHO05D006931 2.2e-14 84.3 347 30.5
Ciclev10013954m.g Citrus clementina HOM05D000904 ORTHO05D006931 2.9e-14 84.0 91 48.4
CsaV3_3G006640 Cucumis sativus L. HOM05D000904 ORTHO05D006931 1.4e-13 81.6 357 27.7
ATR1089G094 Amborella trichopoda HOM05D000904 ORTHO05D006931 1.9e-13 81.3 412 27.9
PGR042G3242 Punica granatum HOM05D000904 ORTHO05D006931 4.2e-13 80.1 189 36.0
AUR62043443 Chenopodium quinoa HOM05D000904 ORTHO05D006931 5.4e-13 79.7 378 29.9
AagrBONN_evm.TU.Sc2ySwM_228.1260 Anthoceros agrestis HOM05D000904 ORTHO05D006931 2.7e-12 77.4 44 65.9
BcaC05g24900 Brassica carinata HOM05D000904 ORTHO05D006931 3.9e-11 73.6 262 29.8
Zm00001eb243910 Zea mays HOM05D000904 ORTHO05D006931 3.9e-11 73.6 350 27.7
Mapoly0079s0042 Marchantia polymorpha HOM05D000904 ORTHO05D006931 1.9e-10 71.2 382 24.9
SEGI_25881 Sequoiadendron giganteum HOM05D000904 ORTHO05D006931 1.3e-09 68.6 398 25.6
Duzib147G0375 Durio zibethinus HOM05D002531 ORTHO05D003018 2.9e-06 57.4 37 70.3


User provided reference genes

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