Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021669001 Vitis vinifera HOM05D000216 ORTHO05D000634 1.1e-66 256.5 128 100.0
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 2.0e-12 76.3 101 45.5
GSVIVG01032753001 Vitis vinifera HOM05D000216 ORTHO05D000634 7.0e-10 67.8 44 77.3
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 3.2e-07 58.9 116 36.2
Oeu050097.1 Olea europaea HOM05D000216 ORTHO05D000634 7.2e-07 57.8 34 82.4
SEGI_16756 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 7.2e-07 57.8 93 37.6
GSVIVG01017094001 Vitis vinifera HOM05D000216 ORTHO05D000634 7.2e-07 57.8 33 84.8
SEGI_28289 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 9.4e-07 57.4 34 73.5
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.2e-06 57.0 35 77.1
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
Ah.03g148650 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
AL2G20940 Arabidopsis lyrata HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.1e-06 56.2 33 81.8
BcaB03g16406 Brassica carinata HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
BcaC05g28801 Brassica carinata HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
BolC7t41735H Brassica oleracea HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
BolSC44t60847H Brassica oleracea HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
BraSC140t45588Z Brassica rapa HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
CAN.G100.42 Capsicum annuum HOM05D000216 ORTHO05D000634 2.1e-06 56.2 46 63.0
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
Psat4g147920 Pisum sativum HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
SHI35296 Sapria himalayana HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 81.8
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.1e-06 56.2 33 81.8
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 78.8
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 2.1e-06 56.2 33 78.8
Eucgr.K01622 Eucalyptus grandis HOM05D000216 ORTHO05D000634 2.7e-06 55.8 33 78.8
Hma1.2p1_0094F.1_g047104 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 2.7e-06 55.8 33 78.8
Lj2A1237T129 Lonicera japonica HOM05D000216 ORTHO05D000634 2.7e-06 55.8 33 81.8
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 2.7e-06 55.8 33 81.8
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 2.7e-06 55.8 33 81.8
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 2.7e-06 55.8 33 81.8
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 2.7e-06 55.8 33 78.8
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 2.7e-06 55.8 33 78.8
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 2.7e-06 55.8 33 78.8
SEGI_37297 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 2.7e-06 55.8 34 70.6
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 2.7e-06 55.8 33 75.8
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 3.6e-06 55.5 33 75.8
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 3.6e-06 55.5 33 75.8
Gohir.D07G215200 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.6e-06 55.5 33 81.8
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 3.6e-06 55.5 33 75.8
HanXRQChr00c0988g0578121 Helianthus annuus HOM05D000216 ORTHO05D000634 3.6e-06 55.5 33 75.8
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 3.6e-06 55.5 33 75.8
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 3.6e-06 55.5 33 75.8
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 3.6e-06 55.5 33 75.8
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 3.6e-06 55.5 33 75.8
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 3.6e-06 55.5 33 78.8
Lalb_Chr09g0335371 Lupinus albus HOM05D000216 ORTHO05D000634 6.1e-06 54.7 33 78.8
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
COL.COLO4_00652 Corchorus olitorius HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
COL.COLO4_02132 Corchorus olitorius HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
HanXRQChr07g0188331 Helianthus annuus HOM05D000216 ORTHO05D000634 8.0e-06 54.3 32 75.0
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8
PGSC0003DMG400020296 Solanum tuberosum HOM05D000216 ORTHO05D000634 8.0e-06 54.3 33 78.8


User provided reference genes

Program Settings