Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017379001 Vitis vinifera HOM05D006093 ORTHO05D007652 3.4e-172 608.2 306 100.0
Nn8g39568 Nelumbo nucifera HOM05D006093 ORTHO05D007652 1.4e-125 453.4 257 84.4
QL05p032033 Quercus lobata HOM05D006093 ORTHO05D007652 8.6e-123 444.1 267 80.1
TWI12G0620 Tripterygium wilfordii HOM05D006093 ORTHO05D007652 3.3e-122 442.2 249 84.3
Manes.04G110800 Manihot esculenta HOM05D006093 ORTHO05D007652 4.3e-122 441.8 249 84.7
Gorai.011G089400 Gossypium raimondii HOM05D006093 ORTHO05D007652 5.6e-122 441.4 257 81.7
Rhsim12G0190000 Rhododendron simsii HOM05D006093 ORTHO05D007652 5.4e-117 424.9 286 73.4
CSS0022367 Camellia sinensis var. sinensis HOM05D006093 ORTHO05D007652 7.0e-117 424.5 304 71.7
CiPaw.01G249800 Carya illinoinensis HOM05D006093 ORTHO05D007652 7.0e-117 424.5 245 82.9
TAR626G1009 Trochodendron aralioides HOM05D006093 ORTHO05D007652 9.2e-117 424.1 245 84.1
Phvul.005G179300 Phaseolus vulgaris HOM05D006093 ORTHO05D007652 4.6e-116 421.8 249 82.3
Ca_01048_v3 Cicer arietinum L. HOM05D006093 ORTHO05D007652 1.0e-115 420.6 249 79.9
CAN.G407.11 Capsicum annuum HOM05D006093 ORTHO05D007652 1.7e-115 419.9 249 79.5
Potri.003G031100 Populus trichocarpa HOM05D006093 ORTHO05D007652 3.0e-115 419.1 268 78.0
COL.COLO4_11898 Corchorus olitorius HOM05D006093 ORTHO05D007652 5.0e-115 418.3 245 82.0
Hma1.2p1_0017F.1_g011320 Hydrangea macrophylla HOM05D006093 ORTHO05D007652 6.6e-115 417.9 278 75.5
Duzib235G0399 Durio zibethinus HOM05D006093 ORTHO05D007652 1.5e-114 416.8 245 82.4
Atru.chr1.2881 Acer truncatum HOM05D006093 ORTHO05D007652 9.5e-114 414.1 245 81.2
Gohir.D10G082500 Gossypium hirsutum HOM05D006093 ORTHO05D007652 1.2e-113 413.7 245 81.2
Ciclev10025737m.g Citrus clementina HOM05D006093 ORTHO05D007652 2.8e-113 412.5 245 80.8
Thecc.06G031100 Theobroma cacao HOM05D006093 ORTHO05D007652 1.4e-112 410.2 245 80.0
SalBow2G3638 Salvia bowleyana HOM05D006093 ORTHO05D007652 3.1e-112 409.1 249 78.7
Eucgr.F03905 Eucalyptus grandis HOM05D006093 ORTHO05D007652 1.2e-111 407.1 245 79.2
Cpa.g.sc167.9 Carica papaya HOM05D006093 ORTHO05D007652 1.5e-111 406.8 245 79.2
MSTRG.11153 Avicennia marina HOM05D006093 ORTHO05D007652 2.6e-111 406.0 245 80.8
DCAR_025523 Daucus carota HOM05D006093 ORTHO05D007652 2.6e-111 406.0 245 79.2
BcaC08g43998 Brassica carinata HOM05D006093 ORTHO05D007652 3.4e-111 405.6 245 79.2
Thhalv10011553m.g Eutrema salsugineum HOM05D006093 ORTHO05D007652 5.8e-111 404.8 248 79.0
Manes.11G058700 Manihot esculenta HOM05D006093 ORTHO05D007652 5.8e-111 404.8 245 80.0
MD17G1215000 Malus domestica HOM05D006093 ORTHO05D007652 9.8e-111 404.1 245 80.4
RcHm_v2.0_Chr2g0134861 Rosa chinensis HOM05D006093 ORTHO05D007652 9.8e-111 404.1 278 72.7
Sabra03G0017500 Salix brachista HOM05D006093 ORTHO05D007652 9.8e-111 404.1 353 62.3
Lj5A75T43 Lonicera japonica HOM05D006093 ORTHO05D007652 1.3e-110 403.7 270 73.7
BolC6t36581H Brassica oleracea HOM05D006093 ORTHO05D007652 2.2e-110 402.9 245 78.4
Lalb_Chr24g0395421 Lupinus albus HOM05D006093 ORTHO05D007652 2.2e-110 402.9 245 79.2
Sp1g39050 Schrenkiella parvula HOM05D006093 ORTHO05D007652 2.2e-110 402.9 245 78.8
FvH4_6g29401 Fragaria vesca HOM05D006093 ORTHO05D007652 3.7e-110 402.1 245 79.2
FAN14G2225 Fragaria x ananassa HOM05D006093 ORTHO05D007652 3.7e-110 402.1 245 79.2
Lj3g0003829 Lotus japonicus HOM05D006093 ORTHO05D007652 3.7e-110 402.1 245 79.2
PGSC0003DMG400014146 Solanum tuberosum HOM05D006093 ORTHO05D007652 3.7e-110 402.1 245 78.4
A05p18970 Brassica napus HOM05D006093 ORTHO05D007652 4.9e-110 401.7 245 78.8
BraA05t20794Z Brassica rapa HOM05D006093 ORTHO05D007652 4.9e-110 401.7 245 78.8
Glyma.13G366800 Glycine max HOM05D006093 ORTHO05D007652 4.9e-110 401.7 245 79.6
Peaxi162Scf00553g00627 Petunia axillaris HOM05D006093 ORTHO05D007652 4.9e-110 401.7 249 77.5
Migut.I00747 Erythranthe guttata HOM05D006093 ORTHO05D007652 1.1e-109 400.6 245 78.8
AT1G52500 Arabidopsis thaliana HOM05D006093 ORTHO05D007652 1.4e-109 400.2 245 78.0
MBI15_g24195_MAGBIO Magnolia biondii HOM05D006093 ORTHO05D007652 1.9e-109 399.8 247 78.5
VMungo1080G1109 Vigna mungo HOM05D006093 ORTHO05D007652 1.9e-109 399.8 245 79.6
BcaB02g10988 Brassica carinata HOM05D006093 ORTHO05D007652 2.4e-109 399.4 245 77.6
Carub.0001s4146 Capsella rubella HOM05D006093 ORTHO05D007652 2.4e-109 399.4 245 78.0
FAN09G4542 Fragaria x ananassa HOM05D006093 ORTHO05D007652 4.1e-109 398.7 245 78.4
ATR0800G026 Amborella trichopoda HOM05D006093 ORTHO05D007652 5.4e-109 398.3 245 78.4
Solyc03g117510.4 Solanum lycopersicum HOM05D006093 ORTHO05D007652 5.4e-109 398.3 245 78.0
vmacro16879 Vaccinium macrocarpon HOM05D006093 ORTHO05D007652 5.4e-109 398.3 261 76.2
Nitab4.5_0010806g0010 Nicotiana tabacum HOM05D006093 ORTHO05D007652 9.2e-109 397.5 245 76.3
THA.LOC104818014 Tarenaya hassleriana HOM05D006093 ORTHO05D007652 9.2e-109 397.5 245 76.3
TPR.G37262 Trifolium pratense HOM05D006093 ORTHO05D007652 9.2e-109 397.5 243 78.6
PSO170G6797 Papaver somniferum HOM05D006093 ORTHO05D007652 1.6e-108 396.7 247 78.1
Sopen03g036410 Solanum pennellii HOM05D006093 ORTHO05D007652 2.1e-108 396.4 245 78.0
CsaV3_4G001910 Cucumis sativus L. HOM05D006093 ORTHO05D007652 4.6e-108 395.2 245 78.0
Sed0013008 Sechium edule HOM05D006093 ORTHO05D007652 7.8e-108 394.4 245 77.6
Hund00502 Selenicereus undatus HOM05D006093 ORTHO05D007652 1.0e-107 394.0 248 75.8
HanXRQChr02g0033451 Helianthus annuus HOM05D006093 ORTHO05D007652 1.3e-107 393.7 245 76.3
Medtr2g104100 Medicago truncatula HOM05D006093 ORTHO05D007652 1.3e-107 393.7 245 77.6
CANSAT56G0666 Cannabis sativa HOM05D006093 ORTHO05D007652 5.1e-107 391.7 246 77.6
Cc04_g04560 Coffea canephora HOM05D006093 ORTHO05D007652 5.1e-107 391.7 245 76.3
Ah.01g020480 Amaranthus hybridus HOM05D006093 ORTHO05D007652 2.5e-106 389.4 266 74.1
Prupe.3G090700 Prunus persica HOM05D006093 ORTHO05D007652 5.6e-106 388.3 307 69.4
arahy.Tifrunner.gnm1.ann1.5T1ZSX Arachis hypogaea HOM05D006093 ORTHO05D007652 1.2e-105 387.1 245 76.3
arahy.Tifrunner.gnm1.ann1.RDN84X Arachis hypogaea HOM05D006093 ORTHO05D007652 1.2e-105 387.1 245 76.3
HPP92_003851 Vanilla planifolia HOM05D006093 ORTHO05D007652 2.1e-105 386.3 245 71.4
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 4.7e-105 385.2 245 74.3
Gohir.A10G068900 Gossypium hirsutum HOM05D006093 ORTHO05D007652 6.2e-105 384.8 245 77.6
Os06g0643600 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 6.2e-105 384.8 251 71.3
AUR62016319 Chenopodium quinoa HOM05D006093 ORTHO05D007652 8.1e-105 384.4 245 78.0
Aa31LG10G2500 Aethionema arabicum HOM05D006093 ORTHO05D007652 1.4e-104 383.6 268 70.5
PGR102G2220 Punica granatum HOM05D006093 ORTHO05D007652 4.0e-104 382.1 249 76.3
unitig_62.g23594 Utricularia gibba HOM05D006093 ORTHO05D007652 1.2e-103 380.6 245 73.9
AUR62011503 Chenopodium quinoa HOM05D006093 ORTHO05D007652 2.6e-103 379.4 245 76.3
Nitab4.5_0003072g0060 Nicotiana tabacum HOM05D006093 ORTHO05D007652 4.4e-103 378.6 249 73.9
EL10Ac9g21886 Beta vulgaris HOM05D006093 ORTHO05D007652 2.2e-102 376.3 245 75.9
Lsat_1_v5_gn_1_34180 Lactuca sativa HOM05D006093 ORTHO05D007652 1.4e-101 373.6 249 73.1
Zm00001eb275260 Zea mays HOM05D006093 ORTHO05D007652 1.9e-101 373.2 250 68.8
FAN05G1370 Fragaria x ananassa HOM05D006093 ORTHO05D007652 2.4e-101 372.9 246 74.4
CARHR042600 Cardamine hirsuta HOM05D006093 ORTHO05D007652 1.6e-100 370.2 222 79.7
CDE05G1298 Ceratophyllum demersum HOM05D006093 ORTHO05D007652 1.6e-100 370.2 246 72.4
AL1G60740 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 2.7e-100 369.4 222 79.3
ECA247G0880 Erigeron canadensis HOM05D006093 ORTHO05D007652 7.8e-100 367.9 249 69.9
HanXRQChr02g0033461 Helianthus annuus HOM05D006093 ORTHO05D007652 1.0e-99 367.5 269 66.9
ClCG07G012240 Citrullus lanatus HOM05D006093 ORTHO05D007652 1.7e-99 366.7 225 78.2
SGA_v2.0_scaffold5G02719 Striga asiatica HOM05D006093 ORTHO05D007652 1.5e-98 363.6 233 77.3
Psat5g303120 Pisum sativum HOM05D006093 ORTHO05D007652 3.3e-98 362.5 251 73.3
MELO3C017842.2 Cucumis melo HOM05D006093 ORTHO05D007652 7.3e-98 361.3 249 71.1
HanXRQChr02g0033471 Helianthus annuus HOM05D006093 ORTHO05D007652 6.2e-97 358.2 270 65.9
Os08g0304900 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 1.4e-96 357.1 245 67.3
Haze_16582 Corylus avellana HOM05D006093 ORTHO05D007652 5.1e-91 338.6 198 83.3
SMO367G0330 Selaginella moellendorffii HOM05D006093 ORTHO05D007652 2.9e-86 322.8 249 64.7
SHI11225 Sapria himalayana HOM05D006093 ORTHO05D007652 4.6e-84 315.5 249 63.1
Pp3c8_24280 Physcomitrium patens HOM05D006093 ORTHO05D007652 3.3e-82 309.3 250 59.6
Pp3c23_21520 Physcomitrium patens HOM05D006093 ORTHO05D007652 9.6e-82 307.8 249 59.8
Mapoly0015s0062 Marchantia polymorpha HOM05D006093 ORTHO05D007652 1.3e-75 287.3 249 53.4
Dinv30625 Davidia involucrata HOM05D006093 ORTHO05D007652 1.8e-75 287.0 206 68.9
Actinidia08791 Actinidia chinensis HOM05D006093 ORTHO05D007652 2.1e-73 280.0 168 81.0
Sc10g0008130 Simmondsia chinensis HOM05D006093 ORTHO05D007652 1.7e-70 270.4 168 76.8
Cfa001944 Carpinus fangiana HOM05D006093 ORTHO05D007652 6.7e-67 258.5 152 81.6
Pp3c24_20180 Physcomitrium patens HOM05D006093 ORTHO05D007652 6.7e-67 258.5 250 50.8
Psat6g066000 Pisum sativum HOM05D006093 ORTHO05D007652 4.0e-64 249.2 144 84.0
Cre10.g428433 Chlamydomonas reinhardtii HOM05D006093 ORTHO05D007652 1.2e-60 237.7 261 47.9
CBR_g884 Chara braunii HOM05D006093 ORTHO05D007652 2.1e-60 236.9 191 54.5
GSVIVG01026354001 Vitis vinifera HOM05D006093 ORTHO05D007652 4.8e-57 225.7 113 99.1
MCO15G481 Micromonas commoda HOM05D006093 ORTHO05D007652 6.3e-57 225.3 274 43.4
Eucgr.L03570 Eucalyptus grandis HOM05D006093 ORTHO05D007652 3.9e-51 206.1 114 84.2
PSO017G4202 Papaver somniferum HOM05D006093 ORTHO05D007652 6.5e-46 188.7 126 73.0
Cfa026683 Carpinus fangiana HOM05D006093 ORTHO05D007652 2.8e-41 173.3 303 32.3
SEGI_24777 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 1.2e-36 157.9 103 71.8
AL7G45760 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 1.8e-35 154.1 101 76.2
Actinidia08958 Actinidia chinensis HOM05D006093 ORTHO05D007652 2.2e-33 147.1 77 88.3
Oeu058023.3 Olea europaea HOM05D006093 ORTHO05D005440 2.2e-33 147.1 101 73.3
Dinv01702 Davidia involucrata HOM05D006093 ORTHO05D007652 1.2e-31 141.4 91 70.3
Gohir.D10G074901 Gossypium hirsutum HOM05D006093 ORTHO05D007652 2.2e-30 137.1 115 60.9
Dinv21460 Davidia involucrata HOM05D006093 ORTHO05D007652 6.5e-30 135.6 77 80.5
Cfa001945 Carpinus fangiana HOM05D006093 ORTHO05D007652 1.6e-28 131.0 250 38.0
Medtr3g118550 Medicago truncatula HOM05D006093 ORTHO05D007652 1.7e-17 94.4 126 48.4
Thecc.09G173900 Theobroma cacao HOM05D006093 ORTHO05D007652 6.3e-17 92.4 79 59.5
Sabra14G0094900 Salix brachista HOM05D006093 ORTHO05D007652 3.5e-15 86.7 54 75.9
SEGI_39009 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 1.2e-10 71.6 89 39.3
PRCOL_00006677 Prasinoderma coloniale HOM05D016293 ORTHO05D018978 1.2e-07 61.6 234 30.8
Pp3c21_8660 Physcomitrium patens HOM05D016293 ORTHO05D018978 3.5e-07 60.1 95 35.8
BolC4t26141H Brassica oleracea HOM05D035675 ORTHO05D007652 7.8e-07 58.9 60 55.0
Ca_29136_v3 Cicer arietinum L. HOM05D016293 ORTHO05D018978 7.8e-07 58.9 261 22.6


User provided reference genes

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