Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3799 Erigeron canadensis HOM05D005687 ORTHO05D007098 1.8e-50 202.2 99 100.0
Lsat_1_v5_gn_1_12201 Lactuca sativa HOM05D005687 ORTHO05D007098 8.6e-32 140.2 107 72.0
Ca_19701_v3 Cicer arietinum L. HOM05D005687 ORTHO05D007098 1.0e-29 133.3 99 64.6
Gohir.A05G273000 Gossypium hirsutum HOM05D005687 ORTHO05D007098 3.0e-29 131.7 104 65.4
Gorai.009G288500 Gossypium raimondii HOM05D005687 ORTHO05D007098 3.0e-29 131.7 104 65.4
HanXRQChr02g0044211 Helianthus annuus HOM05D005687 ORTHO05D007098 6.8e-29 130.6 100 72.0
Nn5g27549 Nelumbo nucifera HOM05D005687 ORTHO05D007098 1.5e-28 129.4 112 60.7
Glyma.12G001400 Glycine max HOM05D005687 ORTHO05D007098 2.6e-28 128.6 98 66.3
QL02p026060 Quercus lobata HOM05D005687 ORTHO05D007098 2.6e-28 128.6 101 65.3
ClCG08G000280 Citrullus lanatus HOM05D005687 ORTHO05D007098 3.4e-28 128.3 114 57.9
Potri.013G107800 Populus trichocarpa HOM05D005687 ORTHO05D007098 3.4e-28 128.3 106 64.2
Thecc.08G189500 Theobroma cacao HOM05D005687 ORTHO05D007098 4.4e-28 127.9 112 60.7
Phvul.011G001500 Phaseolus vulgaris HOM05D005687 ORTHO05D007098 9.8e-28 126.7 99 67.7
Psat7g144520 Pisum sativum HOM05D005687 ORTHO05D007098 1.3e-27 126.3 99 63.6
RcHm_v2.0_Chr7g0228031 Rosa chinensis HOM05D005687 ORTHO05D007098 1.7e-27 125.9 110 59.1
MELO3C022220.2 Cucumis melo HOM05D005687 ORTHO05D007098 2.2e-27 125.6 114 57.9
Dinv41744 Davidia involucrata HOM05D005687 ORTHO05D007098 2.2e-27 125.6 110 61.8
Medtr4g033210 Medicago truncatula HOM05D005687 ORTHO05D007098 2.2e-27 125.6 99 62.6
PSO170G1542 Papaver somniferum HOM05D005687 ORTHO05D007098 2.2e-27 125.6 114 56.1
PSO017G1535 Papaver somniferum HOM05D005687 ORTHO05D007098 3.7e-27 124.8 114 56.1
Solyc11g022390.2 Solanum lycopersicum HOM05D005687 ORTHO05D007098 3.7e-27 124.8 107 60.7
TWI59G0019 Tripterygium wilfordii HOM05D005687 ORTHO05D007098 3.7e-27 124.8 115 58.3
THA.LOC104800128 Tarenaya hassleriana HOM05D005687 ORTHO05D007098 4.9e-27 124.4 116 58.6
Manes.18G104200 Manihot esculenta HOM05D005687 ORTHO05D007098 6.4e-27 124.0 110 60.0
Sopen11g011260 Solanum pennellii HOM05D005687 ORTHO05D007098 6.4e-27 124.0 107 59.8
PGSC0003DMG401009270 Solanum tuberosum HOM05D005687 ORTHO05D007098 6.4e-27 124.0 107 59.8
FAN04G0407 Fragaria x ananassa HOM05D005687 ORTHO05D007098 8.3e-27 123.6 105 64.8
Peaxi162Scf00391g00732 Petunia axillaris HOM05D005687 ORTHO05D007098 8.3e-27 123.6 107 61.7
vmacro00992 Vaccinium macrocarpon HOM05D005687 ORTHO05D007098 8.3e-27 123.6 113 58.4
SalBow6G3036 Salvia bowleyana HOM05D005687 ORTHO05D007098 1.1e-26 123.2 106 62.3
Actinidia01555 Actinidia chinensis HOM05D005687 ORTHO05D007098 1.4e-26 122.9 110 58.2
AT1G72090 Arabidopsis thaliana HOM05D005687 ORTHO05D007098 1.4e-26 122.9 115 59.1
TAR376G0067 Trochodendron aralioides HOM05D005687 ORTHO05D007098 1.4e-26 122.9 109 62.4
CANSAT35G0683 Cannabis sativa HOM05D005687 ORTHO05D007098 1.8e-26 122.5 107 61.7
CAN.G155.2 Capsicum annuum HOM05D005687 ORTHO05D007098 2.4e-26 122.1 107 59.8
Migut.C01307 Erythranthe guttata HOM05D005687 ORTHO05D007098 2.4e-26 122.1 102 63.7
VMungo1127G0635 Vigna mungo HOM05D005687 ORTHO05D007098 2.4e-26 122.1 99 62.6
Lj3g0026050 Lotus japonicus HOM05D005687 ORTHO05D007098 3.2e-26 121.7 99 62.6
Nitab4.5_0001534g0050 Nicotiana tabacum HOM05D005687 ORTHO05D007098 4.1e-26 121.3 108 58.3
AL2G31710 Arabidopsis lyrata HOM05D005687 ORTHO05D007098 5.4e-26 120.9 115 56.5
Cc10_g10120 Coffea canephora HOM05D005687 ORTHO05D007098 5.4e-26 120.9 104 61.5
MD15G1407900 Malus domestica HOM05D005687 ORTHO05D007098 5.4e-26 120.9 114 60.5
CARHR064900 Cardamine hirsuta HOM05D005687 ORTHO05D007098 7.0e-26 120.6 113 56.6
Thhalv10018307m.g Eutrema salsugineum HOM05D005687 ORTHO05D007098 7.0e-26 120.6 115 56.5
Ciclev10000582m.g Citrus clementina HOM05D005687 ORTHO05D007098 9.2e-26 120.2 110 58.2
FvH4_5g32030 Fragaria vesca HOM05D005687 ORTHO05D007098 9.2e-26 120.2 120 56.7
MD08G1219300 Malus domestica HOM05D005687 ORTHO05D007098 9.2e-26 120.2 116 59.5
Prupe.1G553700 Prunus persica HOM05D005687 ORTHO05D007098 9.2e-26 120.2 117 58.1
TPR.G34137 Trifolium pratense HOM05D005687 ORTHO05D007098 9.2e-26 120.2 99 61.6
Carub.0002s1887 Capsella rubella HOM05D005687 ORTHO05D007098 1.2e-25 119.8 116 56.0
DCAR_017367 Daucus carota HOM05D005687 ORTHO05D007098 1.2e-25 119.8 100 62.0
FAN18G2804 Fragaria x ananassa HOM05D005687 ORTHO05D007098 1.2e-25 119.8 120 56.7
CsaV3_5G040460 Cucumis sativus L. HOM05D005687 ORTHO05D007098 2.0e-25 119.0 115 56.5
FAN08G1133 Fragaria x ananassa HOM05D005687 ORTHO05D007098 2.0e-25 119.0 111 58.6
CSS0048983 Camellia sinensis var. sinensis HOM05D005687 ORTHO05D007098 2.7e-25 118.6 109 61.5
PGR042G3796 Punica granatum HOM05D005687 ORTHO05D007098 2.7e-25 118.6 108 58.3
ATR1134G072 Amborella trichopoda HOM05D005687 ORTHO05D007098 3.5e-25 118.2 100 60.0
AUR62022645 Chenopodium quinoa HOM05D005687 ORTHO05D007098 3.5e-25 118.2 98 60.2
Eucgr.F03000 Eucalyptus grandis HOM05D005687 ORTHO05D007098 3.5e-25 118.2 116 56.0
MSTRG.1558 Avicennia marina HOM05D005687 ORTHO05D007098 4.6e-25 117.9 106 58.5
Sp5g27150 Schrenkiella parvula HOM05D005687 ORTHO05D007098 4.6e-25 117.9 115 54.8
Zm00001eb422680 Zea mays HOM05D005687 ORTHO05D007098 7.8e-25 117.1 104 59.6
CSS0035020 Camellia sinensis var. sinensis HOM05D005687 ORTHO05D007098 1.3e-24 116.3 113 59.3
BcaC08g46660 Brassica carinata HOM05D005687 ORTHO05D007098 1.7e-24 115.9 116 52.6
Cpa.g.sc66.10 Carica papaya HOM05D005687 ORTHO05D007098 1.7e-24 115.9 124 54.0
Aa31LG4G8560 Aethionema arabicum HOM05D005687 ORTHO05D007098 3.0e-24 115.2 112 52.7
Sc01g0001920 Simmondsia chinensis HOM05D005687 ORTHO05D007098 5.0e-24 114.4 102 57.8
EL10Ac1g00122 Beta vulgaris HOM05D005687 ORTHO05D007098 6.6e-24 114.0 99 59.6
CDE06G1536 Ceratophyllum demersum HOM05D005687 ORTHO05D007098 6.6e-24 114.0 102 58.8
Lalb_Chr19g0140501 Lupinus albus HOM05D005687 ORTHO05D007098 8.6e-24 113.6 98 57.1
BcaB03g14944 Brassica carinata HOM05D005687 ORTHO05D007098 2.5e-23 112.1 115 52.2
Os04g0434300 Oryza sativa ssp. japonica HOM05D005687 ORTHO05D007098 5.6e-23 110.9 102 58.8
Atru.chr13.2348 Acer truncatum HOM05D005687 ORTHO05D007098 7.3e-23 110.5 137 48.9
HPP92_016134 Vanilla planifolia HOM05D005687 ORTHO05D007098 9.5e-23 110.2 103 58.3
unitig_32.g11184 Utricularia gibba HOM05D001035 ORTHO05D007098 1.6e-22 109.4 108 58.3
arahy.Tifrunner.gnm1.ann1.BDG91C Arachis hypogaea HOM05D005687 ORTHO05D007098 2.8e-22 108.6 102 54.9
A07p38240 Brassica napus HOM05D005687 ORTHO05D007098 4.7e-22 107.8 122 49.2
C06p46310 Brassica napus HOM05D005687 ORTHO05D007098 4.7e-22 107.8 126 48.4
Aqoxy5G02668 Aquilegia oxysepala HOM05D005687 ORTHO05D007098 6.2e-22 107.5 126 49.2
BolC6t39676H Brassica oleracea HOM05D005687 ORTHO05D007098 6.2e-22 107.5 126 48.4
BraA07t31389Z Brassica rapa HOM05D005687 ORTHO05D007098 6.2e-22 107.5 126 48.4
AUR62004616 Chenopodium quinoa HOM05D005687 ORTHO05D007098 2.6e-20 102.1 129 45.7
SGA_v2.0_scaffold118G32517 Striga asiatica HOM05D005687 ORTHO05D007098 3.4e-20 101.7 125 48.0
Pp3c6_10380 Physcomitrium patens HOM05D005687 ORTHO05D007098 4.4e-20 101.3 127 45.7
Mapoly0002s0019 Marchantia polymorpha HOM05D005687 ORTHO05D007098 2.9e-19 98.6 105 48.6
Haze_21291 Corylus avellana HOM05D005687 ORTHO05D007098 2.4e-18 95.5 99 57.6
Gohir.D05G275400 Gossypium hirsutum HOM05D005687 ORTHO05D007098 7.0e-18 94.0 54 81.5
Cfa012938 Carpinus fangiana HOM05D005687 ORTHO05D007098 9.2e-18 93.6 99 56.6
Sabra13G0093200 Salix brachista HOM05D005687 ORTHO05D007098 9.2e-18 93.6 103 55.3
Zm00001eb082600 Zea mays HOM05D005687 ORTHO05D045168 3.5e-17 91.7 57 73.7
Hund16781 Selenicereus undatus HOM05D005687 ORTHO05D007098 2.5e-15 85.5 99 50.5
Hma1.2p1_0004F.1_g003990 Hydrangea macrophylla HOM05D005687 ORTHO05D007098 3.3e-15 85.1 45 84.4
Nitab4.5_0003826g0010 Nicotiana tabacum HOM05D005687 ORTHO05D007098 1.2e-14 83.2 108 47.2
SMO116G0266 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 3.1e-13 78.6 44 79.5
Cre03.g149300 Chlamydomonas reinhardtii HOM05D005687 ORTHO05D007098 2.0e-12 75.9 102 44.1
arahy.Tifrunner.gnm1.ann1.H6WZRG Arachis hypogaea HOM05D005687 ORTHO05D007098 1.7e-11 72.8 102 44.1
MCO07G120 Micromonas commoda HOM05D005687 ORTHO05D007098 1.1e-10 70.1 51 56.9
GSVIVG01034467001 Vitis vinifera HOM05D005687 ORTHO05D027697 1.1e-10 70.1 76 53.9
SEGI_07740 Sequoiadendron giganteum HOM05D005687 ORTHO05D027697 5.4e-10 67.8 71 53.5
PRCOL_00002733 Prasinoderma coloniale HOM05D005687 ORTHO05D007098 1.6e-06 56.2 51 49.0


User provided reference genes

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