Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G5003 Erigeron canadensis HOM05D003786 ORTHO05D004375 4.1e-98 361.3 170 100.0
ECA233G5822 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.2e-70 270.0 132 93.9
HanXRQChr01g0022711 Helianthus annuus HOM05D003786 ORTHO05D004375 1.1e-50 203.8 127 75.6
HanXRQChr12g0373371 Helianthus annuus HOM05D003786 ORTHO05D004375 2.0e-49 199.5 129 75.2
CSS0045889 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 5.0e-48 194.9 129 69.8
Lsat_1_v5_gn_2_25701 Lactuca sativa HOM05D003786 ORTHO05D004375 3.3e-47 192.2 140 68.6
Dinv01513 Davidia involucrata HOM05D003786 ORTHO05D004375 9.5e-47 190.7 129 67.4
Lsat_1_v5_gn_6_69540 Lactuca sativa HOM05D003786 ORTHO05D004375 9.5e-47 190.7 141 67.4
vmacro03165 Vaccinium macrocarpon HOM05D003786 ORTHO05D004375 9.5e-47 190.7 127 67.7
MBI03_g28482_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 2.1e-46 189.5 129 66.7
Lj2P1038T21 Lonicera japonica HOM05D003786 ORTHO05D004375 8.0e-46 187.6 127 68.5
CSS0041475 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 1.0e-45 187.2 129 67.4
Ciclev10029956m.g Citrus clementina HOM05D003786 ORTHO05D004375 1.0e-45 187.2 126 68.3
TAR369G0701 Trochodendron aralioides HOM05D003786 ORTHO05D004375 1.0e-45 187.2 129 66.7
Rhsim13G0091500 Rhododendron simsii HOM05D003786 ORTHO05D004375 3.1e-45 185.7 142 59.2
Rhsim13G0091800 Rhododendron simsii HOM05D003786 ORTHO05D004375 6.8e-45 184.5 134 61.9
Cc00_g24070 Coffea canephora HOM05D003786 ORTHO05D004375 8.9e-45 184.1 129 66.7
Cpa.g.sc318.5 Carica papaya HOM05D003786 ORTHO05D004375 1.2e-44 183.7 127 64.6
MBI04_g27239_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 3.4e-44 182.2 129 64.3
DCAR_006378 Daucus carota HOM05D003786 ORTHO05D004375 9.8e-44 180.6 127 66.1
COL.COLO4_25255 Corchorus olitorius HOM05D003786 ORTHO05D004375 1.3e-43 180.3 142 62.0
ECA238G1499 Erigeron canadensis HOM05D003786 ORTHO05D004375 1.3e-43 180.3 128 67.2
Nitab4.5_0005175g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.2e-43 179.5 125 68.0
PGSC0003DMG401003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 3.7e-43 178.7 127 66.9
PGSC0003DMG402003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 3.7e-43 178.7 127 66.9
DCAR_006383 Daucus carota HOM05D003786 ORTHO05D004375 6.4e-43 177.9 127 64.6
Manes.11G140700 Manihot esculenta HOM05D003786 ORTHO05D004375 1.1e-42 177.2 127 65.4
Atru.chr3.3714 Acer truncatum HOM05D003786 ORTHO05D004375 1.4e-42 176.8 130 61.5
Actinidia09138 Actinidia chinensis HOM05D003786 ORTHO05D004375 5.4e-42 174.9 129 64.3
Nitab4.5_0000106g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 5.4e-42 174.9 125 66.4
CSS0017411 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 1.2e-41 173.7 129 65.1
CAN.G1001.22 Capsicum annuum HOM05D003786 ORTHO05D004375 1.6e-41 173.3 125 66.4
Sopen06g031770 Solanum pennellii HOM05D003786 ORTHO05D004375 1.6e-41 173.3 125 65.6
CsaV3_6G021540 Cucumis sativus L. HOM05D003786 ORTHO05D004375 2.0e-41 172.9 127 63.0
Potri.009G131500 Populus trichocarpa HOM05D003786 ORTHO05D004375 3.5e-41 172.2 127 65.4
Solyc06g075350.3 Solanum lycopersicum HOM05D003786 ORTHO05D004375 3.5e-41 172.2 125 64.8
PGSC0003DMG400007497 Solanum tuberosum HOM05D003786 ORTHO05D004375 3.5e-41 172.2 125 65.6
ClCG02G020870 Citrullus lanatus HOM05D003786 ORTHO05D004375 6.0e-41 171.4 127 63.0
Thecc.09G261300 Theobroma cacao HOM05D003786 ORTHO05D004375 6.0e-41 171.4 129 63.6
Prupe.6G093000 Prunus persica HOM05D003786 ORTHO05D004375 7.8e-41 171.0 146 56.2
TAR623G0784 Trochodendron aralioides HOM05D003786 ORTHO05D004375 7.8e-41 171.0 129 60.5
Peaxi162Scf00072g00045 Petunia axillaris HOM05D003786 ORTHO05D004375 1.0e-40 170.6 125 65.6
SalBow3G3536 Salvia bowleyana HOM05D003786 ORTHO05D004375 1.0e-40 170.6 132 60.6
arahy.Tifrunner.gnm1.ann1.2E7PU8 Arachis hypogaea HOM05D003786 ORTHO05D004375 1.7e-40 169.9 127 64.6
Duzib168G0697 Durio zibethinus HOM05D003786 ORTHO05D004375 2.3e-40 169.5 127 63.8
CAN.G1001.9 Capsicum annuum HOM05D003786 ORTHO05D004375 3.9e-40 168.7 129 64.3
Peaxi162Scf00272g00092 Petunia axillaris HOM05D003786 ORTHO05D004375 3.9e-40 168.7 125 64.8
Sabra09G0101900 Salix brachista HOM05D003786 ORTHO05D004375 5.0e-40 168.3 128 65.6
BcaB01g04647 Brassica carinata HOM05D003786 ORTHO05D004375 6.6e-40 167.9 127 62.2
QL01p036748 Quercus lobata HOM05D003786 ORTHO05D004375 8.6e-40 167.5 130 58.5
BolC3t13758H Brassica oleracea HOM05D003786 ORTHO05D004375 1.1e-39 167.2 127 62.2
CiPaw.14G077400 Carya illinoinensis HOM05D003786 ORTHO05D004375 1.1e-39 167.2 126 62.7
Gohir.A13G003000 Gossypium hirsutum HOM05D003786 ORTHO05D004375 1.1e-39 167.2 125 64.0
Manes.04G025700 Manihot esculenta HOM05D003786 ORTHO05D004375 1.1e-39 167.2 134 59.0
Eucgr.J01130 Eucalyptus grandis HOM05D003786 ORTHO05D004375 1.5e-39 166.8 126 58.7
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 1.5e-39 166.8 129 58.1
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.5e-39 166.8 129 58.1
Lj1g0003252 Lotus japonicus HOM05D003786 ORTHO05D004375 1.5e-39 166.8 126 64.3
TPR.G28524 Trifolium pratense HOM05D003786 ORTHO05D004375 1.5e-39 166.8 133 60.9
C03p12960 Brassica napus HOM05D003786 ORTHO05D004375 1.9e-39 166.4 127 61.4
Gorai.013G002800 Gossypium raimondii HOM05D003786 ORTHO05D004375 1.9e-39 166.4 127 62.2
Sabra09G0099700 Salix brachista HOM05D003786 ORTHO05D004375 1.9e-39 166.4 128 64.8
Sabra09G0100500 Salix brachista HOM05D003786 ORTHO05D004375 1.9e-39 166.4 128 65.6
THA.LOC104799484 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 1.9e-39 166.4 129 64.3
MD11G1123700 Malus domestica HOM05D003786 ORTHO05D004375 2.5e-39 166.0 139 58.3
Nitab4.5_0021870g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.5e-39 166.0 125 64.8
Sp6g21860 Schrenkiella parvula HOM05D003786 ORTHO05D004375 2.5e-39 166.0 127 61.4
Gohir.D13G002900 Gossypium hirsutum HOM05D003786 ORTHO05D004375 4.3e-39 165.2 127 62.2
Haze_20932 Corylus avellana HOM05D003786 ORTHO05D004375 7.3e-39 164.5 126 60.3
Migut.D02178 Erythranthe guttata HOM05D003786 ORTHO05D004375 7.3e-39 164.5 135 57.0
Haze_23937 Corylus avellana HOM05D003786 ORTHO05D004375 9.5e-39 164.1 126 61.1
Psat3g070480 Pisum sativum HOM05D003786 ORTHO05D004375 9.5e-39 164.1 124 63.7
A03p11270 Brassica napus HOM05D003786 ORTHO05D004375 1.2e-38 163.7 126 61.1
BraA03t10439Z Brassica rapa HOM05D003786 ORTHO05D004375 1.2e-38 163.7 126 61.1
Carub.0008s2097 Capsella rubella HOM05D003786 ORTHO05D004375 1.2e-38 163.7 134 57.5
Nn2g10664 Nelumbo nucifera HOM05D003786 ORTHO05D004375 1.2e-38 163.7 127 59.1
THA.LOC104810009 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 1.2e-38 163.7 127 61.4
TWI31G1207 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 1.2e-38 163.7 126 61.1
A10p17360 Brassica napus HOM05D003786 ORTHO05D004375 1.6e-38 163.3 155 53.5
TPR.G4813 Trifolium pratense HOM05D003786 ORTHO05D004375 1.6e-38 163.3 124 62.9
AT5G60230 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 2.1e-38 162.9 132 59.8
arahy.Tifrunner.gnm1.ann1.XC8HKJ Arachis hypogaea HOM05D003786 ORTHO05D004375 2.1e-38 162.9 134 61.2
Ca_08491_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 2.1e-38 162.9 125 61.6
Ca_30036_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 2.1e-38 162.9 125 61.6
Glyma.04G189200 Glycine max HOM05D003786 ORTHO05D004375 2.1e-38 162.9 126 63.5
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 2.8e-38 162.5 126 57.9
CANSAT54G0858 Cannabis sativa HOM05D003786 ORTHO05D004375 3.6e-38 162.2 147 53.7
Thhalv10015366m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 3.6e-38 162.2 127 60.6
Glyma.10G072100 Glycine max HOM05D003786 ORTHO05D004375 6.2e-38 161.4 126 61.9
Medtr7g092500 Medicago truncatula HOM05D003786 ORTHO05D004375 6.2e-38 161.4 124 63.7
TWI75G0263 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 6.2e-38 161.4 129 58.1
AT3G45590 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 8.1e-38 161.0 129 62.0
PGR102G2306 Punica granatum HOM05D003786 ORTHO05D004375 1.1e-37 160.6 129 57.4
RcHm_v2.0_Chr3g0449171 Rosa chinensis HOM05D003786 ORTHO05D004375 1.1e-37 160.6 127 59.1
Sed0001350 Sechium edule HOM05D003786 ORTHO05D004375 1.1e-37 160.6 126 60.3
AL8G36840 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 1.4e-37 160.2 126 61.1
Phvul.001G137825 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 4.0e-37 158.7 126 64.3
SHI14981 Sapria himalayana HOM05D003786 ORTHO05D004375 4.0e-37 158.7 130 56.9
MSTRG.858 Avicennia marina HOM05D003786 ORTHO05D004375 5.2e-37 158.3 127 60.6
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 5.2e-37 158.3 126 58.7
FvH4_6g01503 Fragaria vesca HOM05D003786 ORTHO05D004375 6.8e-37 157.9 126 58.7
Migut.I00230 Erythranthe guttata HOM05D003786 ORTHO05D004375 8.9e-37 157.5 135 54.8
C09p52700 Brassica napus HOM05D003786 ORTHO05D004375 1.2e-36 157.1 127 59.1
BolC9t58138H Brassica oleracea HOM05D003786 ORTHO05D004375 1.2e-36 157.1 127 59.1
Psat6g109040 Pisum sativum HOM05D003786 ORTHO05D004375 1.2e-36 157.1 145 57.2
VMungo1127G2311 Vigna mungo HOM05D003786 ORTHO05D004375 1.2e-36 157.1 127 62.2
Phvul.001G138100 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 1.5e-36 156.8 122 64.8
Sc06g0010590 Simmondsia chinensis HOM05D003786 ORTHO05D004375 2.0e-36 156.4 133 54.9
Carub.0005s1880 Capsella rubella HOM05D003786 ORTHO05D004375 2.6e-36 156.0 132 56.8
unitig_736.g22421 Utricularia gibba HOM05D003786 ORTHO05D004375 2.6e-36 156.0 129 56.6
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 4.4e-36 155.2 126 57.1
FAN05G4299 Fragaria x ananassa HOM05D003786 ORTHO05D004375 4.4e-36 155.2 126 57.1
Aa31LG5G20880 Aethionema arabicum HOM05D003786 ORTHO05D004375 5.8e-36 154.8 127 57.5
SGA_v2.0_scaffold97G29166 Striga asiatica HOM05D003786 ORTHO05D004375 5.8e-36 154.8 126 60.3
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 7.5e-36 154.5 126 57.1
BraA10t43819Z Brassica rapa HOM05D003786 ORTHO05D004375 9.8e-36 154.1 128 58.6
FAN02G2859 Fragaria x ananassa HOM05D003786 ORTHO05D004375 9.8e-36 154.1 126 57.9
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 9.8e-36 154.1 126 56.3
ATR0763G039 Amborella trichopoda HOM05D003786 ORTHO05D004375 1.3e-35 153.7 127 58.3
RcHm_v2.0_Chr5g0061031 Rosa chinensis HOM05D003786 ORTHO05D004375 1.7e-35 153.3 126 56.3
Ah.08g211230 Amaranthus hybridus HOM05D003786 ORTHO05D004375 2.2e-35 152.9 129 56.6
Ah.12g063340 Amaranthus hybridus HOM05D003786 ORTHO05D004375 2.2e-35 152.9 129 56.6
Aqoxy2G03481_Aqoxy2G03482 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 4.9e-35 151.8 126 58.7
AUR62042700 Chenopodium quinoa HOM05D003786 ORTHO05D004375 4.9e-35 151.8 125 56.0
AUR62044767 Chenopodium quinoa HOM05D003786 ORTHO05D004375 4.9e-35 151.8 125 56.0
Oeu022264.1 Olea europaea HOM05D003786 ORTHO05D004375 1.1e-34 150.6 103 67.0
AUR62019620 Chenopodium quinoa HOM05D003786 ORTHO05D004375 1.4e-34 150.2 125 55.2
Gorai.013G255400 Gossypium raimondii HOM05D003786 ORTHO05D004375 1.4e-34 150.2 116 61.2
Nitab4.5_0001421g0060 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.4e-34 150.2 108 63.9
AL5G24200 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 1.9e-34 149.8 127 58.3
SGA_v2.0_scaffold32G12943 Striga asiatica HOM05D003786 ORTHO05D004375 1.9e-34 149.8 133 54.9
Os11g0602400 Oryza sativa ssp. japonica HOM05D003786 ORTHO05D004375 7.1e-34 147.9 140 50.0
EL10Ac6g14823 Beta vulgaris HOM05D003786 ORTHO05D004375 9.2e-34 147.5 125 53.6
SEGI_12201 Sequoiadendron giganteum HOM05D003786 ORTHO05D004375 9.2e-34 147.5 128 55.5
AUR62040193 Chenopodium quinoa HOM05D003786 ORTHO05D004375 1.2e-33 147.1 125 53.6
Gohir.D13G224600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 1.6e-33 146.7 116 59.5
Lalb_Chr25g0287531 Lupinus albus HOM05D003786 ORTHO05D004375 4.6e-33 145.2 124 58.9
Aa31LG4G14750 Aethionema arabicum HOM05D003786 ORTHO05D004375 7.8e-33 144.4 156 46.8
Migut.I00250 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.7e-32 143.3 123 54.5
Actinidia03750 Actinidia chinensis HOM05D003786 ORTHO05D004375 1.1e-31 140.6 130 53.8
PSO541G4585 Papaver somniferum HOM05D003786 ORTHO05D004375 1.1e-31 140.6 126 57.1
HPP92_017618 Vanilla planifolia HOM05D003786 ORTHO05D004375 1.9e-31 139.8 128 52.3
Aqoxy6G02754 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 3.3e-31 139.0 130 55.4
AUR62039602 Chenopodium quinoa HOM05D003786 ORTHO05D004375 9.5e-31 137.5 108 59.3
CARHR150050 Cardamine hirsuta HOM05D003786 ORTHO05D004375 2.8e-30 136.0 119 54.6
Potri.014G083401 Populus trichocarpa HOM05D003786 ORTHO05D004375 6.2e-30 134.8 93 64.5
MELO3C025739.2 Cucumis melo HOM05D003786 ORTHO05D004375 8.1e-30 134.4 95 63.2
Nitab4.5_0000888g0190 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.1e-29 134.0 90 66.7
Pp3c27_2720 Physcomitrium patens HOM05D003786 ORTHO05D004375 1.8e-29 133.3 136 44.9
CDE05G0279 Ceratophyllum demersum HOM05D003786 ORTHO05D004375 4.0e-29 132.1 125 52.8
Zm00001eb228610 Zea mays HOM05D003786 ORTHO05D004375 5.2e-29 131.7 140 45.7
Migut.I00240 Erythranthe guttata HOM05D003786 ORTHO05D004375 6.8e-29 131.3 93 61.3
Glyma.19G143800 Glycine max HOM05D003786 ORTHO05D004375 1.5e-28 130.2 118 56.8
GSVIVG01025123001 Vitis vinifera HOM05D003786 ORTHO05D004375 2.0e-28 129.8 127 52.0
Mapoly0072s0108 Marchantia polymorpha HOM05D003786 ORTHO05D004375 4.4e-28 128.6 125 46.4
Migut.I00232 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.7e-27 126.7 93 60.2
Thhalv10002801m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 3.8e-27 125.6 125 52.0
Lsat_1_v5_gn_2_25281 Lactuca sativa HOM05D003786 ORTHO05D004375 3.8e-27 125.6 75 76.0
TAR376G1065 Trochodendron aralioides HOM05D000267 ORTHO05D004375 3.0e-24 115.9 148 43.9
BcaB08g36317 Brassica carinata HOM05D003786 ORTHO05D004375 2.5e-23 112.8 127 48.0
PSO675G4257 Papaver somniferum HOM05D003786 ORTHO05D004375 2.5e-23 112.8 112 50.0
Oeu012677.3 Olea europaea HOM05D003786 ORTHO05D004375 2.1e-22 109.8 126 47.6
MD11G1124300 Malus domestica HOM05D003786 ORTHO05D004375 4.9e-19 98.6 65 67.7
CBR_g44920 Chara braunii HOM05D003786 ORTHO05D004375 4.2e-18 95.5 126 38.9
Migut.I00236 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.2e-17 94.0 135 40.7
Medtr0262s0030 Medicago truncatula HOM05D003786 ORTHO05D004375 2.7e-17 92.8 66 66.7
BolC3t13761H Brassica oleracea HOM05D003786 ORTHO05D004375 1.9e-15 86.7 53 69.8
Nitab4.5_0005175g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 5.6e-15 85.1 54 64.8
SGA_v2.0_scaffold146G36226 Striga asiatica HOM05D003786 ORTHO05D004375 1.6e-14 83.6 58 63.8
Cre02.g096900 Chlamydomonas reinhardtii HOM05D003786 ORTHO05D004375 1.8e-13 80.1 137 31.4
Migut.I00245 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.2e-12 77.4 119 39.5
Medtr5g031400 Medicago truncatula HOM05D003786 ORTHO05D004375 1.9e-10 70.1 124 36.3
MCO01G070 Micromonas commoda HOM05D003786 ORTHO05D004375 2.7e-09 66.2 136 30.9
RcHm_v2.0_Chr5g0025331 Rosa chinensis HOM05D003786 ORTHO05D004375 2.5e-07 59.7 61 44.3
HanXRQChr03g0093641 Helianthus annuus HOM05D000921 ORTHO05D002852 4.8e-06 55.5 39 69.2
VMungo0563G0001 Vigna mungo HOM05D003786 ORTHO05D004375 6.2e-06 55.1 92 39.1


User provided reference genes

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