Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30625 Davidia involucrata HOM05D006093 ORTHO05D007652 1.4e-174 616.3 346 100.0
CSS0022367 Camellia sinensis var. sinensis HOM05D006093 ORTHO05D007652 2.9e-111 406.0 289 75.1
Hma1.2p1_0017F.1_g011320 Hydrangea macrophylla HOM05D006093 ORTHO05D007652 2.1e-109 399.8 262 79.0
vmacro16879 Vaccinium macrocarpon HOM05D006093 ORTHO05D007652 1.8e-105 386.7 324 67.3
Gohir.D10G082500 Gossypium hirsutum HOM05D006093 ORTHO05D007652 7.7e-104 381.3 250 77.2
Atru.chr1.2881 Acer truncatum HOM05D006093 ORTHO05D007652 1.7e-103 380.2 256 76.2
Manes.11G058700 Manihot esculenta HOM05D006093 ORTHO05D007652 2.2e-103 379.8 311 67.8
TAR626G1009 Trochodendron aralioides HOM05D006093 ORTHO05D007652 5.0e-103 378.6 261 73.6
Ciclev10025737m.g Citrus clementina HOM05D006093 ORTHO05D007652 1.9e-102 376.7 314 66.2
COL.COLO4_11898 Corchorus olitorius HOM05D006093 ORTHO05D007652 1.9e-102 376.7 250 76.4
Thecc.06G031100 Theobroma cacao HOM05D006093 ORTHO05D007652 5.5e-102 375.2 250 76.0
Lj3g0003829 Lotus japonicus HOM05D006093 ORTHO05D007652 7.2e-102 374.8 316 63.6
Duzib235G0399 Durio zibethinus HOM05D006093 ORTHO05D007652 1.2e-101 374.0 298 65.1
PSO170G6797 Papaver somniferum HOM05D006093 ORTHO05D007652 4.0e-100 369.0 316 62.7
CiPaw.01G249800 Carya illinoinensis HOM05D006093 ORTHO05D007652 5.2e-100 368.6 318 62.9
Lalb_Chr24g0395421 Lupinus albus HOM05D006093 ORTHO05D007652 6.8e-100 368.2 306 65.0
TPR.G37262 Trifolium pratense HOM05D006093 ORTHO05D007652 9.8e-99 364.4 288 65.6
EL10Ac9g21886 Beta vulgaris HOM05D006093 ORTHO05D007652 1.7e-98 363.6 311 68.2
Lj5A75T43 Lonicera japonica HOM05D006093 ORTHO05D007652 4.8e-98 362.1 338 63.0
Potri.003G031100 Populus trichocarpa HOM05D006093 ORTHO05D007652 4.8e-98 362.1 311 66.9
HanXRQChr02g0033451 Helianthus annuus HOM05D006093 ORTHO05D007652 6.3e-98 361.7 248 72.6
AT1G52500 Arabidopsis thaliana HOM05D006093 ORTHO05D007652 1.8e-97 360.1 262 71.4
FAN14G2225 Fragaria x ananassa HOM05D006093 ORTHO05D007652 1.8e-97 360.1 314 63.4
BolC6t36581H Brassica oleracea HOM05D006093 ORTHO05D007652 4.1e-97 359.0 262 70.2
Carub.0001s4146 Capsella rubella HOM05D006093 ORTHO05D007652 4.1e-97 359.0 262 71.4
Glyma.13G366800 Glycine max HOM05D006093 ORTHO05D007652 5.4e-97 358.6 313 61.7
Sp1g39050 Schrenkiella parvula HOM05D006093 ORTHO05D007652 5.4e-97 358.6 262 70.2
MBI15_g24195_MAGBIO Magnolia biondii HOM05D006093 ORTHO05D007652 7.0e-97 358.2 255 71.0
A05p18970 Brassica napus HOM05D006093 ORTHO05D007652 9.1e-97 357.8 262 70.6
BraA05t20794Z Brassica rapa HOM05D006093 ORTHO05D007652 9.1e-97 357.8 262 70.6
Gorai.011G089400 Gossypium raimondii HOM05D006093 ORTHO05D007652 9.1e-97 357.8 302 63.9
BcaC08g43998 Brassica carinata HOM05D006093 ORTHO05D007652 1.2e-96 357.5 262 70.2
Migut.I00747 Erythranthe guttata HOM05D006093 ORTHO05D007652 1.2e-96 357.5 332 58.7
Medtr2g104100 Medicago truncatula HOM05D006093 ORTHO05D007652 1.2e-96 357.5 252 71.8
FvH4_6g29401 Fragaria vesca HOM05D006093 ORTHO05D007652 1.6e-96 357.1 314 63.1
MSTRG.11153 Avicennia marina HOM05D006093 ORTHO05D007652 4.5e-96 355.5 248 72.6
Thhalv10011553m.g Eutrema salsugineum HOM05D006093 ORTHO05D007652 4.5e-96 355.5 247 73.3
arahy.Tifrunner.gnm1.ann1.5T1ZSX Arachis hypogaea HOM05D006093 ORTHO05D007652 5.9e-96 355.1 255 71.4
arahy.Tifrunner.gnm1.ann1.RDN84X Arachis hypogaea HOM05D006093 ORTHO05D007652 5.9e-96 355.1 255 71.4
FAN09G4542 Fragaria x ananassa HOM05D006093 ORTHO05D007652 1.3e-95 354.0 314 62.7
VMungo1080G1109 Vigna mungo HOM05D006093 ORTHO05D007652 1.3e-95 354.0 304 63.5
THA.LOC104818014 Tarenaya hassleriana HOM05D006093 ORTHO05D007652 2.9e-95 352.8 262 67.9
RcHm_v2.0_Chr2g0134861 Rosa chinensis HOM05D006093 ORTHO05D007652 5.0e-95 352.1 310 61.9
MD17G1215000 Malus domestica HOM05D006093 ORTHO05D007652 6.6e-95 351.7 243 73.3
Eucgr.F03905 Eucalyptus grandis HOM05D006093 ORTHO05D007652 1.1e-94 350.9 255 68.2
BcaB02g10988 Brassica carinata HOM05D006093 ORTHO05D007652 1.5e-94 350.5 247 72.1
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 1.5e-94 350.5 298 62.4
Nitab4.5_0010806g0010 Nicotiana tabacum HOM05D006093 ORTHO05D007652 2.5e-94 349.7 257 68.1
CANSAT56G0666 Cannabis sativa HOM05D006093 ORTHO05D007652 7.2e-94 348.2 309 60.8
Actinidia08791 Actinidia chinensis HOM05D006093 ORTHO05D007652 1.6e-93 347.1 276 68.5
PGSC0003DMG400014146 Solanum tuberosum HOM05D006093 ORTHO05D007652 1.6e-93 347.1 260 68.5
FAN05G1370 Fragaria x ananassa HOM05D006093 ORTHO05D007652 2.8e-93 346.3 322 60.9
ATR0800G026 Amborella trichopoda HOM05D006093 ORTHO05D007652 4.7e-93 345.5 313 60.1
Solyc03g117510.4 Solanum lycopersicum HOM05D006093 ORTHO05D007652 4.7e-93 345.5 260 68.1
QL05p032033 Quercus lobata HOM05D006093 ORTHO05D007652 8.0e-93 344.7 298 62.8
Haze_16582 Corylus avellana HOM05D006093 ORTHO05D007652 1.0e-92 344.4 245 72.7
Gohir.A10G068900 Gossypium hirsutum HOM05D006093 ORTHO05D007652 1.4e-92 344.0 256 71.5
AUR62016319 Chenopodium quinoa HOM05D006093 ORTHO05D007652 3.0e-92 342.8 316 59.5
Rhsim12G0190000 Rhododendron simsii HOM05D006093 ORTHO05D007652 3.0e-92 342.8 339 59.0
Cc04_g04560 Coffea canephora HOM05D006093 ORTHO05D007652 5.2e-92 342.0 239 72.0
Sopen03g036410 Solanum pennellii HOM05D006093 ORTHO05D007652 8.9e-92 341.3 260 67.7
AUR62011503 Chenopodium quinoa HOM05D006093 ORTHO05D007652 2.0e-91 340.1 244 70.9
Aa31LG10G2500 Aethionema arabicum HOM05D006093 ORTHO05D007652 5.7e-91 338.6 285 63.2
Sed0013008 Sechium edule HOM05D006093 ORTHO05D007652 5.7e-91 338.6 264 64.8
CsaV3_4G001910 Cucumis sativus L. HOM05D006093 ORTHO05D007652 1.3e-90 337.4 263 65.8
CDE05G1298 Ceratophyllum demersum HOM05D006093 ORTHO05D007652 1.7e-90 337.0 261 67.4
DCAR_025523 Daucus carota HOM05D006093 ORTHO05D007652 4.9e-90 335.5 252 70.2
Cpa.g.sc167.9 Carica papaya HOM05D006093 ORTHO05D007652 6.3e-90 335.1 221 74.7
TWI12G0620 Tripterygium wilfordii HOM05D006093 ORTHO05D007652 1.4e-89 334.0 286 62.9
Ca_01048_v3 Cicer arietinum L. HOM05D006093 ORTHO05D007652 5.9e-88 328.6 341 54.5
SalBow2G3638 Salvia bowleyana HOM05D006093 ORTHO05D007652 7.8e-88 328.2 332 55.7
Phvul.005G179300 Phaseolus vulgaris HOM05D006093 ORTHO05D007652 1.7e-87 327.0 313 59.4
unitig_62.g23594 Utricularia gibba HOM05D006093 ORTHO05D007652 7.3e-86 321.6 304 56.9
CAN.G407.11 Capsicum annuum HOM05D006093 ORTHO05D007652 1.0e-84 317.8 294 59.2
Peaxi162Scf00553g00627 Petunia axillaris HOM05D006093 ORTHO05D007652 1.8e-84 317.0 329 54.1
HPP92_003851 Vanilla planifolia HOM05D006093 ORTHO05D007652 4.0e-84 315.8 318 52.5
ECA247G0880 Erigeron canadensis HOM05D006093 ORTHO05D007652 1.5e-83 313.9 307 57.0
Os06g0643600 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 1.3e-82 310.8 240 65.4
Manes.04G110800 Manihot esculenta HOM05D006093 ORTHO05D007652 3.7e-82 309.3 254 65.4
Os08g0304900 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 3.7e-82 309.3 260 61.2
Zm00001eb275260 Zea mays HOM05D006093 ORTHO05D007652 1.1e-81 307.8 253 62.1
Sabra03G0017500 Salix brachista HOM05D006093 ORTHO05D007652 1.9e-81 307.0 397 50.1
Sc10g0008130 Simmondsia chinensis HOM05D006093 ORTHO05D007652 1.7e-79 300.4 216 70.4
ClCG07G012240 Citrullus lanatus HOM05D006093 ORTHO05D007652 1.1e-78 297.7 342 49.1
Hund00502 Selenicereus undatus HOM05D006093 ORTHO05D007652 3.3e-78 296.2 217 66.8
Nn8g39568 Nelumbo nucifera HOM05D006093 ORTHO05D007652 1.2e-77 294.3 221 71.0
Ah.01g020480 Amaranthus hybridus HOM05D006093 ORTHO05D007652 1.6e-77 293.9 284 58.5
HanXRQChr02g0033461 Helianthus annuus HOM05D006093 ORTHO05D007652 4.0e-76 289.3 245 63.3
HanXRQChr02g0033471 Helianthus annuus HOM05D006093 ORTHO05D007652 4.0e-76 289.3 314 53.8
Lsat_1_v5_gn_1_34180 Lactuca sativa HOM05D006093 ORTHO05D007652 8.9e-76 288.1 291 56.4
GSVIVG01017379001 Vitis vinifera HOM05D006093 ORTHO05D007652 3.4e-75 286.2 206 68.9
Psat5g303120 Pisum sativum HOM05D006093 ORTHO05D007652 9.8e-75 284.6 299 53.8
SGA_v2.0_scaffold5G02719 Striga asiatica HOM05D006093 ORTHO05D007652 3.7e-74 282.7 282 56.0
Cfa001944 Carpinus fangiana HOM05D006093 ORTHO05D007652 4.9e-74 282.3 201 72.1
MELO3C017842.2 Cucumis melo HOM05D006093 ORTHO05D007652 8.6e-71 271.6 274 54.0
PGR102G2220 Punica granatum HOM05D006093 ORTHO05D007652 2.1e-69 266.9 218 64.2
Nitab4.5_0003072g0060 Nicotiana tabacum HOM05D006093 ORTHO05D007652 1.7e-66 257.3 274 54.0
AL1G60740 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 2.3e-63 246.9 183 68.9
CARHR042600 Cardamine hirsuta HOM05D006093 ORTHO05D007652 3.0e-63 246.5 183 68.9
Pp3c23_21520 Physcomitrium patens HOM05D006093 ORTHO05D007652 1.1e-62 244.6 378 40.7
Prupe.3G090700 Prunus persica HOM05D006093 ORTHO05D007652 5.6e-62 242.3 175 70.9
PSO017G4202 Papaver somniferum HOM05D006093 ORTHO05D007652 1.9e-57 227.3 181 65.7
Pp3c8_24280 Physcomitrium patens HOM05D006093 ORTHO05D007652 3.2e-57 226.5 320 42.2
SHI11225 Sapria himalayana HOM05D006093 ORTHO05D007652 9.2e-57 224.9 269 48.3
Mapoly0015s0062 Marchantia polymorpha HOM05D006093 ORTHO05D007652 1.2e-56 224.6 231 48.1
SMO367G0330 Selaginella moellendorffii HOM05D006093 ORTHO05D007652 8.7e-55 218.4 212 53.3
CBR_g884 Chara braunii HOM05D006093 ORTHO05D007652 3.4e-51 206.5 224 44.2
Cre10.g428433 Chlamydomonas reinhardtii HOM05D006093 ORTHO05D007652 8.4e-50 201.8 259 43.2
Pp3c24_20180 Physcomitrium patens HOM05D006093 ORTHO05D007652 7.8e-48 195.3 317 38.5
Psat6g066000 Pisum sativum HOM05D006093 ORTHO05D007652 7.8e-48 195.3 156 67.3
Gohir.D10G074901 Gossypium hirsutum HOM05D006093 ORTHO05D007652 4.5e-43 179.5 108 82.4
MCO15G481 Micromonas commoda HOM05D006093 ORTHO05D007652 7.4e-38 162.2 221 39.8
Cfa001945 Carpinus fangiana HOM05D006093 ORTHO05D007652 3.4e-35 153.3 162 55.6
Cfa026683 Carpinus fangiana HOM05D006093 ORTHO05D007652 1.9e-33 147.5 288 31.6
GSVIVG01026354001 Vitis vinifera HOM05D006093 ORTHO05D007652 9.6e-30 135.2 74 85.1
Eucgr.L03570 Eucalyptus grandis HOM05D006093 ORTHO05D007652 8.2e-29 132.1 75 80.0
AL1G60750 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 3.2e-25 120.2 80 77.5
CARHR042620 Cardamine hirsuta HOM05D006093 ORTHO05D007652 4.6e-24 116.3 133 52.6
SEGI_39009 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 3.3e-22 110.2 76 68.4
AL7G45760 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 1.2e-19 101.7 69 73.9
SEGI_24777 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 8.5e-18 95.5 64 67.2
SGA_v2.0_scaffold72G24067 Striga asiatica HOM05D006093 ORTHO05D007652 2.3e-15 87.4 98 49.0
Dinv01702 Davidia involucrata HOM05D006093 ORTHO05D007652 2.9e-10 70.5 52 61.5
Actinidia08958 Actinidia chinensis HOM05D006093 ORTHO05D007652 5.0e-10 69.7 38 81.6
Medtr3g118550 Medicago truncatula HOM05D006093 ORTHO05D007652 2.5e-09 67.4 117 40.2
Dinv21460 Davidia involucrata HOM05D006093 ORTHO05D007652 4.2e-09 66.6 38 78.9
Oeu058023.3 Olea europaea HOM05D006093 ORTHO05D005440 7.2e-09 65.9 37 75.7


User provided reference genes

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