Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027986 Daucus carota HOM05D003377 ORTHO05D004080 1.1e-60 236.9 156 100.0
TAR633G2602 Trochodendron aralioides HOM05D003377 ORTHO05D004080 6.5e-18 94.7 212 35.8
Psat0s4172g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.5e-17 91.7 167 44.9
Aa31LG3G3000 Aethionema arabicum HOM05D003377 ORTHO05D004080 9.4e-17 90.9 157 41.4
Oeu027950.1 Olea europaea HOM05D003377 ORTHO05D004080 2.1e-16 89.7 163 41.7
CsaV3_UNG202600 Cucumis sativus L. HOM05D003377 ORTHO05D004080 6.1e-16 88.2 179 36.9
AUR62001832 Chenopodium quinoa HOM05D000255 ORTHO05D001008 1.4e-15 87.0 147 42.2
Aqoxy2G01466 Aquilegia oxysepala HOM05D003377 ORTHO05D004080 1.8e-15 86.7 220 34.1
Aqoxy7G02724 Aquilegia oxysepala HOM05D003377 ORTHO05D004080 2.3e-15 86.3 222 33.8
SHI08878 Sapria himalayana HOM05D003377 ORTHO05D004080 7.4e-14 81.3 208 32.7
Cpa.g.sc53.138 Carica papaya HOM05D003377 ORTHO05D004080 9.7e-14 80.9 213 33.8
CsaV3_UNG136030 Cucumis sativus L. HOM05D003377 ORTHO05D004080 1.7e-13 80.1 175 35.4
Cfa006631 Carpinus fangiana HOM05D003377 ORTHO05D004080 2.2e-13 79.7 201 33.8
TWI63G1477 Tripterygium wilfordii HOM05D003377 ORTHO05D004080 2.2e-13 79.7 203 34.0
MELO3C019829.2 Cucumis melo HOM05D003377 ORTHO05D004080 3.7e-13 79.0 209 32.1
PSO801G0341 Papaver somniferum HOM05D003377 ORTHO05D004080 3.7e-13 79.0 40 95.0
PSO832G0433 Papaver somniferum HOM05D003377 ORTHO05D004080 3.7e-13 79.0 40 95.0
MSTRG.390 Avicennia marina HOM05D003377 ORTHO05D004080 4.8e-13 78.6 213 35.2
HanXRQChr17g0546921 Helianthus annuus HOM05D003377 ORTHO05D004080 4.8e-13 78.6 221 35.7
Psat4g176120 Pisum sativum HOM05D003377 ORTHO05D004080 4.8e-13 78.6 199 38.7
SGA_v2.0_scaffold51G18712 Striga asiatica HOM05D003377 ORTHO05D004080 4.8e-13 78.6 228 33.3
CsaV3_UNG096720 Cucumis sativus L. HOM05D003377 ORTHO05D004080 1.1e-12 77.4 213 31.5
CDE08G1030 Ceratophyllum demersum HOM05D003377 ORTHO05D004080 1.4e-12 77.0 41 87.8
CsaV3_UNG185410 Cucumis sativus L. HOM05D003377 ORTHO05D004080 1.8e-12 76.6 210 31.4
Dinv31238 Davidia involucrata HOM05D003377 ORTHO05D004080 2.4e-12 76.3 46 82.6
CsaV3_UNG219500 Cucumis sativus L. HOM05D003377 ORTHO05D004080 5.3e-12 75.1 213 31.0
Nn2g13815 Nelumbo nucifera HOM05D003377 ORTHO05D004080 5.3e-12 75.1 214 31.3
Actinidia38871 Actinidia chinensis HOM05D003377 ORTHO05D004080 7.0e-12 74.7 218 33.9
EL10Ac5g10616 Beta vulgaris HOM05D003377 ORTHO05D004080 7.0e-12 74.7 213 34.7
CsaV3_4G037990 Cucumis sativus L. HOM05D003377 ORTHO05D004080 7.0e-12 74.7 209 31.1
CsaV3_UNG009110 Cucumis sativus L. HOM05D003377 ORTHO05D004080 7.0e-12 74.7 209 31.1
CsaV3_UNG042220 Cucumis sativus L. HOM05D003377 ORTHO05D004080 7.0e-12 74.7 209 31.1
CsaV3_UNG044270 Cucumis sativus L. HOM05D003377 ORTHO05D004080 7.0e-12 74.7 209 31.1
CsaV3_UNG134030 Cucumis sativus L. HOM05D003377 ORTHO05D004080 7.0e-12 74.7 209 31.1
CsaV3_UNG175360 Cucumis sativus L. HOM05D003377 ORTHO05D004080 7.0e-12 74.7 209 31.1
Lsat_1_v5_gn_8_20881 Lactuca sativa HOM05D003377 ORTHO05D004080 7.0e-12 74.7 218 33.5
PSO339G0916 Papaver somniferum HOM05D003377 ORTHO05D004080 7.0e-12 74.7 225 32.0
Sc09g0006040 Simmondsia chinensis HOM05D003377 ORTHO05D004080 7.0e-12 74.7 208 33.7
Peaxi162Scf00145g00117 Petunia axillaris HOM05D003377 ORTHO05D004080 9.1e-12 74.3 46 84.8
Ah.04g156330 Amaranthus hybridus HOM05D003377 ORTHO05D004080 1.2e-11 73.9 216 33.3
Cc02_g10870 Coffea canephora HOM05D003377 ORTHO05D004080 1.2e-11 73.9 43 83.7
CSS0024679 Camellia sinensis var. sinensis HOM05D003377 ORTHO05D004080 1.6e-11 73.6 36 100.0
Lj2C21T5 Lonicera japonica HOM05D003377 ORTHO05D004080 1.6e-11 73.6 220 33.6
vmacro10250 Vaccinium macrocarpon HOM05D003377 ORTHO05D004080 1.6e-11 73.6 43 86.0
CSS0003122 Camellia sinensis var. sinensis HOM05D003377 ORTHO05D004080 2.0e-11 73.2 36 97.2
Aqoxy7G02722 Aquilegia oxysepala HOM05D003377 ORTHO05D004080 2.6e-11 72.8 217 31.8
CANSAT56G4416 Cannabis sativa HOM05D003377 ORTHO05D004080 3.5e-11 72.4 223 30.9
Psat4g130920 Pisum sativum HOM05D003377 ORTHO05D004080 3.5e-11 72.4 179 38.0
vmacro04833 Vaccinium macrocarpon HOM05D003377 ORTHO05D004080 3.5e-11 72.4 211 32.2
Hund10377 Selenicereus undatus HOM05D003377 ORTHO05D004080 4.5e-11 72.0 38 89.5
Thecc.10G085000 Theobroma cacao HOM05D003377 ORTHO05D004080 4.5e-11 72.0 211 32.2
Aqoxy7G02723 Aquilegia oxysepala HOM05D003377 ORTHO05D004080 5.9e-11 71.6 37 91.9
Solyc11g008290.1 Solanum lycopersicum HOM05D003377 ORTHO05D004080 5.9e-11 71.6 221 31.2
Sopen11g004100 Solanum pennellii HOM05D003377 ORTHO05D004080 7.7e-11 71.2 222 30.6
CsaV3_UNG082620 Cucumis sativus L. HOM05D003377 ORTHO05D004080 1.0e-10 70.9 207 30.4
ECA233G1775 Erigeron canadensis HOM05D003377 ORTHO05D004080 1.0e-10 70.9 37 91.9
THA.LOC104816427 Tarenaya hassleriana HOM05D003377 ORTHO05D004080 1.0e-10 70.9 41 80.5
PGR142G1789 Punica granatum HOM05D003377 ORTHO05D004080 1.3e-10 70.5 44 75.0
PGSC0003DMG400031069 Solanum tuberosum HOM05D003377 ORTHO05D004080 1.3e-10 70.5 36 94.4
Psat4g177920 Pisum sativum HOM05D003377 ORTHO05D004080 1.7e-10 70.1 225 33.3
Rhsim09G0147300 Rhododendron simsii HOM05D003377 ORTHO05D004080 1.7e-10 70.1 223 32.7
Atru.chr12.849 Acer truncatum HOM05D003377 ORTHO05D004080 2.2e-10 69.7 38 84.2
Ciclev10032576m.g Citrus clementina HOM05D003377 ORTHO05D004080 2.2e-10 69.7 38 84.2
ATR1132G106 Amborella trichopoda HOM05D003377 ORTHO05D004080 2.9e-10 69.3 208 31.7
C05p57770 Brassica napus HOM05D003377 ORTHO05D004080 2.9e-10 69.3 216 32.4
BolC5t34434H Brassica oleracea HOM05D003377 ORTHO05D004080 2.9e-10 69.3 216 32.4
Manes.07G133144 Manihot esculenta HOM05D003377 ORTHO05D004080 2.9e-10 69.3 39 79.5
Psat0s4296g0080 Pisum sativum HOM05D003377 ORTHO05D004080 2.9e-10 69.3 225 33.8
Actinidia34803 Actinidia chinensis HOM05D003377 ORTHO05D004080 3.8e-10 68.9 36 88.9
Duzib106G0439 Durio zibethinus HOM05D003377 ORTHO05D004080 3.8e-10 68.9 38 81.6
A05p38760 Brassica napus HOM05D003377 ORTHO05D004080 5.0e-10 68.6 216 31.9
BraA05t22667Z Brassica rapa HOM05D003377 ORTHO05D004080 5.0e-10 68.6 216 31.9
QL08p054194 Quercus lobata HOM05D003377 ORTHO05D004080 5.0e-10 68.6 41 75.6
COL.COLO4_34224 Corchorus olitorius HOM05D003377 ORTHO05D004080 6.5e-10 68.2 216 31.5
Psat0s4296g0120 Pisum sativum HOM05D003377 ORTHO05D004080 6.5e-10 68.2 221 33.0
Potri.010G227500 Populus trichocarpa HOM05D003377 ORTHO05D004080 8.5e-10 67.8 38 81.6
Sabra10G0175500 Salix brachista HOM05D003377 ORTHO05D004080 8.5e-10 67.8 38 81.6
Thecc.10G084800 Theobroma cacao HOM05D003377 ORTHO05D004080 8.5e-10 67.8 211 30.8
AagrBONN_evm.TU.Sc2ySwM_344.2578 Anthoceros agrestis HOM05D003377 ORTHO05D004080 1.1e-09 67.4 41 78.0
Sed0023186 Sechium edule HOM05D003377 ORTHO05D004080 1.1e-09 67.4 206 29.6
HPP92_007057 Vanilla planifolia HOM05D003377 ORTHO05D004080 1.1e-09 67.4 221 31.2
Carub.0003s0958 Capsella rubella HOM05D003377 ORTHO05D004080 1.5e-09 67.0 38 78.9
Thhalv10021363m.g Eutrema salsugineum HOM05D003377 ORTHO05D004080 1.5e-09 67.0 38 78.9
MD01G1102800 Malus domestica HOM05D003377 ORTHO05D004080 1.9e-09 66.6 41 75.6
Nitab4.5_0001450g0130 Nicotiana tabacum HOM05D003377 ORTHO05D004080 1.9e-09 66.6 35 91.4
Sp3g08670 Schrenkiella parvula HOM05D003377 ORTHO05D004080 1.9e-09 66.6 216 30.6
Psat4g169920 Pisum sativum HOM05D003377 ORTHO05D004080 2.5e-09 66.2 225 31.6
RcHm_v2.0_Chr1g0362501 Rosa chinensis HOM05D003377 ORTHO05D004080 2.5e-09 66.2 46 69.6
Gohir.D05G294450 Gossypium hirsutum HOM05D003377 ORTHO05D004080 3.2e-09 65.9 37 81.1
Gorai.009G311000 Gossypium raimondii HOM05D003377 ORTHO05D004080 3.2e-09 65.9 37 81.1
Prupe.2G208400 Prunus persica HOM05D003377 ORTHO05D004080 3.2e-09 65.9 45 71.1
CARHR084880 Cardamine hirsuta HOM05D003377 ORTHO05D004080 4.2e-09 65.5 215 31.2
Gohir.A05G293201 Gossypium hirsutum HOM05D003377 ORTHO05D004080 4.2e-09 65.5 36 80.6
Gohir.D05G293901 Gossypium hirsutum HOM05D003377 ORTHO05D004080 4.2e-09 65.5 36 80.6
Gorai.009G310500 Gossypium raimondii HOM05D003377 ORTHO05D004080 4.2e-09 65.5 36 80.6
Lalb_Chr18g0048181 Lupinus albus HOM05D003377 ORTHO05D004080 4.2e-09 65.5 225 31.1
Psat4g168920 Pisum sativum HOM05D003377 ORTHO05D004080 4.2e-09 65.5 179 36.9
CiPaw.01G268200 Carya illinoinensis HOM05D003377 ORTHO05D004080 5.5e-09 65.1 38 78.9
Mapoly0003s0234 Marchantia polymorpha HOM05D003377 ORTHO05D004080 5.5e-09 65.1 44 68.2
Phvul.005G012700 Phaseolus vulgaris HOM05D003377 ORTHO05D004080 5.5e-09 65.1 42 66.7
unitig_899.g15040 Utricularia gibba HOM05D003377 ORTHO05D004080 5.5e-09 65.1 224 31.2
Migut.F01703 Erythranthe guttata HOM05D003377 ORTHO05D004080 7.2e-09 64.7 219 34.7
Psat4g176400 Pisum sativum HOM05D003377 ORTHO05D004080 7.2e-09 64.7 225 32.9
Pp3c1_20040 Physcomitrium patens HOM05D003377 ORTHO05D004080 9.4e-09 64.3 37 78.4
Psat4g172240 Pisum sativum HOM05D003377 ORTHO05D004080 1.2e-08 63.9 213 33.8
AL3G21730 Arabidopsis lyrata HOM05D003377 ORTHO05D004080 1.6e-08 63.5 209 31.6
AT3G10400 Arabidopsis thaliana HOM05D003377 ORTHO05D004080 1.6e-08 63.5 36 77.8
Psat4g174920 Pisum sativum HOM05D003377 ORTHO05D004080 1.6e-08 63.5 50 64.0
VMungo1080G1642 Vigna mungo HOM05D003377 ORTHO05D004080 2.1e-08 63.2 42 66.7
Psat0s6588g0040 Pisum sativum HOM05D003377 ORTHO05D004080 3.6e-08 62.4 224 32.6
SMO365G0025 Selaginella moellendorffii HOM05D003377 ORTHO05D004080 3.6e-08 62.4 37 78.4
Zm00001eb104270 Zea mays HOM05D003377 ORTHO05D004080 3.6e-08 62.4 38 73.7
CsaV3_UNG073590 Cucumis sativus L. HOM05D003377 ORTHO05D004080 4.7e-08 62.0 37 73.0
CsaV3_UNG081620 Cucumis sativus L. HOM05D003377 ORTHO05D004080 4.7e-08 62.0 37 73.0
Psat0s1397g0040 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat0s1397g0080 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat0s1397g0120 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat0s4205g0040 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat0s5564g0040 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat0s5661g0040 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat0s7999g0040 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat4g154440 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat4g154480 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat4g168880 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat4g170360 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat4g175000 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat4g180920 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat4g188360 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Psat5g144040 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-08 62.0 225 32.4
Os09g0549500 Oryza sativa ssp. japonica HOM05D003377 ORTHO05D004080 6.1e-08 61.6 36 77.8
Psat4g175200 Pisum sativum HOM05D003377 ORTHO05D004080 6.1e-08 61.6 214 32.2
Glyma.06G313200 Glycine max HOM05D003377 ORTHO05D004080 8.0e-08 61.2 217 28.6
FAN10G2046 Fragaria x ananassa HOM05D003377 ORTHO05D004080 1.0e-07 60.8 42 71.4
Ca_19554_v3 Cicer arietinum L. HOM05D003377 ORTHO05D004080 1.4e-07 60.5 45 64.4
CBR_g12926 Chara braunii HOM05D003377 ORTHO05D004080 1.8e-07 60.1 46 63.0
Eucgr.G02870 Eucalyptus grandis HOM05D003377 ORTHO05D004080 1.8e-07 60.1 35 74.3
Psat0s1397g0160 Pisum sativum HOM05D003377 ORTHO05D004080 1.8e-07 60.1 34 76.5
Psat0s1397g0200 Pisum sativum HOM05D003377 ORTHO05D004080 1.8e-07 60.1 45 64.4
Psat4g134240 Pisum sativum HOM05D003377 ORTHO05D004080 1.8e-07 60.1 45 64.4
arahy.Tifrunner.gnm1.ann1.M0CEE4 Arachis hypogaea HOM05D003377 ORTHO05D004080 2.3e-07 59.7 34 76.5
Lj3g0024929 Lotus japonicus HOM05D003377 ORTHO05D004080 2.3e-07 59.7 34 73.5
Psat0s8147g0040 Pisum sativum HOM05D003377 ORTHO05D004080 3.0e-07 59.3 225 32.0
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 3.0e-07 59.3 45 62.2
ClCG08G007750 Citrullus lanatus HOM05D003377 ORTHO05D004080 4.0e-07 58.9 193 28.5
CsaV3_2G020860 Cucumis sativus L. HOM05D003377 ORTHO05D004080 6.7e-07 58.2 195 29.2
FAN03G0143 Fragaria x ananassa HOM05D003377 ORTHO05D004080 8.8e-07 57.8 34 73.5
Psat0s10619g0040 Pisum sativum HOM05D003377 ORTHO05D004080 8.8e-07 57.8 45 62.2
Psat0s10712g0040 Pisum sativum HOM05D003377 ORTHO05D004080 8.8e-07 57.8 45 62.2
Psat0s6878g0040 Pisum sativum HOM05D003377 ORTHO05D004080 8.8e-07 57.8 88 54.5
Psat4g171760 Pisum sativum HOM05D003377 ORTHO05D004080 8.8e-07 57.8 34 73.5
Psat6g115720 Pisum sativum HOM05D003377 ORTHO05D004080 8.8e-07 57.8 88 47.7
CsaV3_UNG038200 Cucumis sativus L. HOM05D003377 ORTHO05D004080 1.2e-06 57.4 81 46.9
CsaV3_UNG077600 Cucumis sativus L. HOM05D003377 ORTHO05D004080 1.2e-06 57.4 81 46.9
CsaV3_UNG119960 Cucumis sativus L. HOM05D003377 ORTHO05D004080 1.2e-06 57.4 81 46.9
FAN01G1901 Fragaria x ananassa HOM05D003377 ORTHO05D004080 1.2e-06 57.4 42 69.0
Psat4g170320 Pisum sativum HOM05D003377 ORTHO05D004080 1.2e-06 57.4 45 62.2
Psat4g171560 Pisum sativum HOM05D003377 ORTHO05D004080 1.5e-06 57.0 256 27.7
Psat0s13123g0040 Pisum sativum HOM05D003377 ORTHO05D004080 2.0e-06 56.6 88 53.4
Psat4g179440 Pisum sativum HOM05D003377 ORTHO05D004080 2.0e-06 56.6 88 48.9
Psat4g179480 Pisum sativum HOM05D003377 ORTHO05D004080 2.0e-06 56.6 88 48.9
FvH4_7g18730 Fragaria vesca HOM05D003377 ORTHO05D004080 2.6e-06 56.2 49 57.1
Psat0s12289g0040 Pisum sativum HOM05D003377 ORTHO05D004080 4.4e-06 55.5 45 57.8
Psat0s5487g0040 Pisum sativum HOM05D003377 ORTHO05D004080 4.4e-06 55.5 181 34.3
CsaV3_2G021160 Cucumis sativus L. HOM05D003377 ORTHO05D004080 5.7e-06 55.1 194 28.4
Psat0s7804g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.7e-06 55.1 225 31.6
Psat4g175240 Pisum sativum HOM05D003377 ORTHO05D004080 7.5e-06 54.7 214 31.3
Peaxi162Scf00160g00719 Petunia axillaris HOM05D003377 ORTHO05D004080 9.7e-06 54.3 27 92.6
Psat0s6221g0040 Pisum sativum HOM05D003377 ORTHO05D004080 9.7e-06 54.3 223 31.8


User provided reference genes

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