Gene: SGA_v2.0_scaffold51G18712

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold51G18712
Transcript Identifier SGA_v2.0_scaffold51T18712
Gene Type Coding gene
Location scaffold51 : 653328-654122 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003377
#Genes/#Species 203/89
Phylogenetic origin

ID ORTHO05D004080
#Genes/#Species 192/89
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product RNA binding motif protein, putative

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome
GO:0051302	ISO	PLAZA Integrative Orthology	regulation of cell division	AT3G10400
GO:0032502	ISO	PLAZA Integrative Orthology	developmental process	AT3G10400

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0008270	IEA	InterPro	zinc ion binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005689	IEA	InterPro	U12-type spliceosomal complex
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G10400

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000504	RNA recognition motif domain
IPR044598	Zinc finger CCHC-type and RNA-binding motif-containing protein 1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR035979	RNA-binding domain superfamily
IPR036875	Zinc finger, CCHC-type superfamily
IPR034219	ZCRB1, RNA recognition motif
IPR001878	Zinc finger, CCHC-type

Mapman id	Description
16.2.4.2.3	RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).RNA chaperone (U11/U12-31K)