Gene: QL08p054194
General Information
Structural Information
- Species Quercus lobata
- Gene Identifier QL08p054194
- Transcript Identifier QL08p054194
- Gene Type Coding gene
- Location 8 : 54194729-54195547 : negative
Gene Family Information
- ID HOM05D003377
- #Genes/#Species 203/89
- Phylogenetic origin
- ID ORTHO05D004080
- #Genes/#Species 192/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid QL08p054194:mrna:CDS:3
- uniprot A0A7N2MDM7
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IEA | GOA Database | mRNA splicing, via spliceosome | |
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0008380 | IEA | GOA Database | RNA splicing | |
| GO:0051302 | ISO | PLAZA Integrative Orthology | regulation of cell division | AT3G10400 |
| GO:0032502 | ISO | PLAZA Integrative Orthology | developmental process | AT3G10400 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003723 | IEA | GOA Database | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005689 | IEA | GOA Database | U12-type spliceosomal complex | |
| GO:0005689 | IEA | InterPro | U12-type spliceosomal complex | |
| GO:0005681 | IEA | GOA Database | spliceosomal complex | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044598 | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 |
| IPR000504 | RNA recognition motif domain |
| IPR035979 | RNA-binding domain superfamily |
| IPR034219 | ZCRB1, RNA recognition motif |
| IPR001878 | Zinc finger, CCHC-type |
| IPR036875 | Zinc finger, CCHC-type superfamily |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Mapman id | Description |
|---|---|
| 16.2.4.2.3 | RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).RNA chaperone (U11/U12-31K) |