Gene: Psat0s1397g0200
General Information
Structural Information
- Species Pisum sativum
- Gene Identifier Psat0s1397g0200
- Transcript Identifier Psat0s1397g0200.1
- Gene Type Coding gene
- Location scaffold01397 : 93568-94380 : positive
Gene Family Information
- ID HOM05D003377
- #Genes/#Species 203/89
- Phylogenetic origin
- ID ORTHO05D004080
- #Genes/#Species 192/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Psat0s1397g0200.1
Descriptions
- Description RNA recognition motif. (a.k.a. RRM RBD or RNP domain)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | ISO | PLAZA Homology (enrichment) | zinc ion binding | HOM05D003377 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005689 | IEA | InterPro | U12-type spliceosomal complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044598 | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 |
| IPR035979 | RNA-binding domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR034219 | ZCRB1, RNA recognition motif |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR003954 | RNA recognition motif domain, eukaryote |
| Mapman id | Description |
|---|---|
| 16.2.4.2.3 | RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).RNA chaperone (U11/U12-31K) |