Gene: Zm00001eb104270
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb104270
- Transcript Identifier Zm00001eb104270_T001
- Gene Type Coding gene
- Location 2 : 203984127-203984930 : negative
Gene Family Information
- ID HOM05D003377
- #Genes/#Species 203/89
- Phylogenetic origin
- ID ORTHO05D004080
- #Genes/#Species 192/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Zm00001eb104270_T001
- pid Zm00001eb104270_P001
- uniprot A0A1D6IB14
- uniprot A0A3L6G621
- uniprot A0A3L6E3G3
- uniprot B6TN55
- uniprot B6U3T0
- entrez 100283922
- refseq NM_001156820.1
- refseq NP_001150292.1
- V4_identifier Zm00001d006294
Descriptions
- Description Zm00001e010299
- Description RNA binding protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IBA IEA | GOA Database | mRNA splicing, via spliceosome | |
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
| GO:0032502 | IEA | GOA Database | developmental process | |
| GO:0051302 | IEA | GOA Database | regulation of cell division | |
| GO:0008380 | IEA | GOA Database | RNA splicing | |
| GO:0006397 | IEA | GOA Database | mRNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | GOA Database | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005689 | IBA IEA | GOA Database | U12-type spliceosomal complex | |
| GO:0005689 | IEA | InterPro | U12-type spliceosomal complex | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005681 | IEA | GOA Database | spliceosomal complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003954 | RNA recognition motif domain, eukaryote |
| IPR044598 | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 |
| IPR000504 | RNA recognition motif domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR001878 | Zinc finger, CCHC-type |
| IPR036875 | Zinc finger, CCHC-type superfamily |
| IPR034219 | ZCRB1, RNA recognition motif |
| IPR035979 | RNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 16.2.4.2.3 | RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).RNA chaperone (U11/U12-31K) |