Gene: Gohir.D05G294450

General Information

Structural Information

Species Gossypium hirsutum
Gene Identifier Gohir.D05G294450
Transcript Identifier Gohir.D05G294450.1
Gene Type Coding gene
Location D05 : 31892441-31894071 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003377
#Genes/#Species 203/89
Phylogenetic origin

ID ORTHO05D004080
#Genes/#Species 192/89
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

id Gohir.D05G294450.v2.1
pacid 42453833

Descriptions

Short descriptions
Ortholog descriptions

Description PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome
GO:0051302	ISO	PLAZA Integrative Orthology	regulation of cell division	AT3G10400
GO:0032502	ISO	PLAZA Integrative Orthology	developmental process	AT3G10400

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0008270	ISO	PLAZA Homology (enrichment)	zinc ion binding	HOM05D003377

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005689	IEA	InterPro	U12-type spliceosomal complex
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G10400

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR044598	Zinc finger CCHC-type and RNA-binding motif-containing protein 1
IPR035979	RNA-binding domain superfamily
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily

Mapman id	Description
16.2.4.2.3	RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).RNA chaperone (U11/U12-31K)