Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc29.1 Carica papaya HOM05D000188 ORTHO05D003976 3.7e-164 581.6 327 100.0
THA.LOC104806689 Tarenaya hassleriana HOM05D000188 ORTHO05D003976 5.3e-147 524.6 325 84.3
TWI60G1508 Tripterygium wilfordii HOM05D000188 ORTHO05D003976 5.3e-147 524.6 328 84.8
TWI15G0852 Tripterygium wilfordii HOM05D000188 ORTHO05D003976 2.0e-146 522.7 325 83.7
Manes.17G021900 Manihot esculenta HOM05D000188 ORTHO05D003976 2.6e-146 522.3 325 85.2
CARHR174460 Cardamine hirsuta HOM05D000188 ORTHO05D003976 4.5e-146 521.5 325 77.5
Glyma.01G202600 Glycine max HOM05D000188 ORTHO05D003976 1.7e-145 519.6 329 79.6
Potri.003G086400 Populus trichocarpa HOM05D000188 ORTHO05D003976 2.9e-145 518.8 329 77.8
AL8G11270 Arabidopsis lyrata HOM05D000188 ORTHO05D003976 5.0e-145 518.1 325 80.3
arahy.Tifrunner.gnm1.ann1.FN6SHM Arachis hypogaea HOM05D000188 ORTHO05D003976 5.0e-145 518.1 329 81.2
arahy.Tifrunner.gnm1.ann1.L380RS Arachis hypogaea HOM05D000188 ORTHO05D003976 5.0e-145 518.1 329 81.2
Sp2g11810 Schrenkiella parvula HOM05D000188 ORTHO05D003976 6.5e-145 517.7 325 80.6
Thhalv10000743m.g Eutrema salsugineum HOM05D000188 ORTHO05D003976 8.5e-145 517.3 325 80.0
Aa31LG9G5970 Aethionema arabicum HOM05D000188 ORTHO05D003976 1.9e-144 516.2 325 83.7
Ca_24627_v3 Cicer arietinum L. HOM05D000188 ORTHO05D003976 3.2e-144 515.4 329 78.7
Potri.001G148100 Populus trichocarpa HOM05D000188 ORTHO05D003976 5.5e-144 514.6 325 77.8
ClCG10G001940 Citrullus lanatus HOM05D000188 ORTHO05D003976 7.2e-144 514.2 329 78.4
MELO3C013879.2 Cucumis melo HOM05D000188 ORTHO05D003976 7.2e-144 514.2 329 78.4
Phvul.002G003300 Phaseolus vulgaris HOM05D000188 ORTHO05D003976 9.4e-144 513.8 329 78.7
Psat2g175000 Pisum sativum HOM05D000188 ORTHO05D003976 9.4e-144 513.8 329 78.4
QL12p007494 Quercus lobata HOM05D000188 ORTHO05D003976 9.4e-144 513.8 335 83.9
Cfa012367 Carpinus fangiana HOM05D000188 ORTHO05D003976 1.2e-143 513.5 330 83.6
Haze_08316 Corylus avellana HOM05D000188 ORTHO05D003976 1.2e-143 513.5 330 81.5
VMungo1215G0424 Vigna mungo HOM05D000188 ORTHO05D003976 1.2e-143 513.5 329 79.0
TPR.G22716 Trifolium pratense HOM05D000188 ORTHO05D003976 1.6e-143 513.1 329 79.3
CsaV3_3G002080 Cucumis sativus L. HOM05D000188 ORTHO05D003976 2.1e-143 512.7 329 78.1
Glyma.11G040200 Glycine max HOM05D000188 ORTHO05D003976 2.7e-143 512.3 329 86.0
Lj2g0002868 Lotus japonicus HOM05D000188 ORTHO05D003976 2.7e-143 512.3 330 78.8
Sed0018558 Sechium edule HOM05D000188 ORTHO05D003976 2.7e-143 512.3 329 81.2
Sabra01G0117900 Salix brachista HOM05D000188 ORTHO05D003976 6.1e-143 511.1 325 76.6
CANSAT21G0831 Cannabis sativa HOM05D000188 ORTHO05D003976 1.4e-142 510.0 329 77.8
Lalb_Chr16g0379271 Lupinus albus HOM05D000188 ORTHO05D003976 1.4e-142 510.0 329 80.5
FvH4_5g20920 Fragaria vesca HOM05D000188 ORTHO05D003976 3.0e-142 508.8 329 83.9
FAN04G1896 Fragaria x ananassa HOM05D000188 ORTHO05D003976 3.0e-142 508.8 329 82.7
FAN13G2517 Fragaria x ananassa HOM05D000188 ORTHO05D003976 3.0e-142 508.8 329 83.3
TWI81G0847 Tripterygium wilfordii HOM05D000188 ORTHO05D003976 3.0e-142 508.8 328 79.6
AT5G47010 Arabidopsis thaliana HOM05D000188 ORTHO05D003976 4.0e-142 508.4 325 79.4
C02p48200 Brassica napus HOM05D000188 ORTHO05D003976 4.0e-142 508.4 325 75.7
BolC2t10853H Brassica oleracea HOM05D000188 ORTHO05D003976 4.0e-142 508.4 325 75.7
Prupe.5G049500 Prunus persica HOM05D000188 ORTHO05D003976 4.0e-142 508.4 329 77.8
RcHm_v2.0_Chr7g0207971 Rosa chinensis HOM05D000188 ORTHO05D003976 5.2e-142 508.1 329 82.7
Ciclev10033615m.g Citrus clementina HOM05D000188 ORTHO05D003976 6.7e-142 507.7 327 88.4
Carub.0008s0082 Capsella rubella HOM05D000188 ORTHO05D003976 1.2e-141 506.9 325 77.8
CiPaw.11G086500 Carya illinoinensis HOM05D000188 ORTHO05D003976 1.2e-141 506.9 333 89.2
MD06G1042600 Malus domestica HOM05D000188 ORTHO05D003976 1.2e-141 506.9 329 77.2
GSVIVG01013247001 Vitis vinifera HOM05D000188 ORTHO05D003976 2.0e-141 506.1 328 77.1
Sabra01G0116400 Salix brachista HOM05D000188 ORTHO05D003976 2.6e-141 505.8 325 80.9
FAN18G0956 Fragaria x ananassa HOM05D000188 ORTHO05D003976 4.4e-141 505.0 329 82.1
Dinv25173 Davidia involucrata HOM05D000188 ORTHO05D003976 5.7e-141 504.6 332 80.7
A02p30660 Brassica napus HOM05D000188 ORTHO05D003976 9.7e-141 503.8 325 79.1
CSS0041371 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D003976 1.7e-140 503.1 332 86.1
Lalb_Chr09g0323981 Lupinus albus HOM05D000188 ORTHO05D003976 2.8e-140 502.3 329 79.6
Eucgr.E00323 Eucalyptus grandis HOM05D000188 ORTHO05D003976 3.7e-140 501.9 327 85.6
Medtr5g013820 Medicago truncatula HOM05D000188 ORTHO05D003976 4.8e-140 501.5 329 77.8
BraA02t08082Z Brassica rapa HOM05D000188 ORTHO05D003976 6.3e-140 501.1 325 78.8
Lsat_1_v5_gn_6_68181 Lactuca sativa HOM05D000188 ORTHO05D003976 2.4e-139 499.2 338 76.3
PGR042G0017 Punica granatum HOM05D000188 ORTHO05D003976 2.4e-139 499.2 326 81.6
Lalb_Chr05g0214101 Lupinus albus HOM05D000188 ORTHO05D003976 3.1e-139 498.8 329 75.7
Oeu019051.3 Olea europaea HOM05D000188 ORTHO05D003976 9.1e-139 497.3 332 81.0
HanXRQChr03g0086991 Helianthus annuus HOM05D000188 ORTHO05D003976 1.2e-138 496.9 338 80.8
Solyc08g007110.4 Solanum lycopersicum HOM05D000188 ORTHO05D003976 1.2e-138 496.9 332 77.7
Sopen08g003060 Solanum pennellii HOM05D000188 ORTHO05D003976 1.2e-138 496.9 332 77.7
FAN08G2510 Fragaria x ananassa HOM05D000188 ORTHO05D003976 2.7e-138 495.7 356 78.1
Thecc.03G235600 Theobroma cacao HOM05D000188 ORTHO05D003976 4.5e-138 495.0 328 84.8
Migut.E00902 Erythranthe guttata HOM05D000188 ORTHO05D003976 5.9e-138 494.6 345 74.8
Cc08_g01700 Coffea canephora HOM05D000188 ORTHO05D003976 7.7e-138 494.2 333 81.1
Nn6g33690 Nelumbo nucifera HOM05D000188 ORTHO05D003976 1.3e-137 493.4 326 75.8
CSS0042114 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D003976 1.7e-137 493.0 333 85.9
COL.COLO4_17123 Corchorus olitorius HOM05D000188 ORTHO05D003976 1.7e-137 493.0 328 84.5
Migut.E00804 Erythranthe guttata HOM05D000188 ORTHO05D003976 2.2e-137 492.7 335 77.0
Gorai.003G179500 Gossypium raimondii HOM05D000188 ORTHO05D003976 2.9e-137 492.3 330 81.8
Gohir.D03G169400 Gossypium hirsutum HOM05D000188 ORTHO05D003976 3.8e-137 491.9 329 81.5
Duzib068G0921 Durio zibethinus HOM05D000188 ORTHO05D003976 5.0e-137 491.5 328 83.5
Sc01g0007820 Simmondsia chinensis HOM05D000188 ORTHO05D003976 5.0e-137 491.5 333 77.5
Lsat_1_v5_gn_6_89421 Lactuca sativa HOM05D000188 ORTHO05D003976 1.1e-136 490.3 338 78.4
Duzib205G1433 Durio zibethinus HOM05D000188 ORTHO05D003976 1.5e-136 490.0 328 78.7
PGSC0003DMG400001863 Solanum tuberosum HOM05D000188 ORTHO05D003976 1.5e-136 490.0 332 74.7
Gohir.D08G180800 Gossypium hirsutum HOM05D000188 ORTHO05D003976 1.9e-136 489.6 328 83.2
Gorai.004G189700 Gossypium raimondii HOM05D000188 ORTHO05D003976 1.9e-136 489.6 328 83.2
MD16G1268400 Malus domestica HOM05D000188 ORTHO05D003976 1.9e-136 489.6 342 74.3
Oeu053049.1 Olea europaea HOM05D000188 ORTHO05D003976 5.5e-136 488.0 346 71.7
Nitab4.5_0001444g0010 Nicotiana tabacum HOM05D000188 ORTHO05D003976 7.2e-136 487.6 332 76.5
Solyc08g077420.3 Solanum lycopersicum HOM05D000188 ORTHO05D003976 9.4e-136 487.3 332 78.9
Sopen08g026010 Solanum pennellii HOM05D000188 ORTHO05D003976 9.4e-136 487.3 332 76.5
Peaxi162Scf00102g00730 Petunia axillaris HOM05D000188 ORTHO05D003976 1.2e-135 486.9 338 73.4
SGA_v2.0_scaffold20G09241 Striga asiatica HOM05D000188 ORTHO05D003976 1.2e-135 486.9 334 72.5
TAR375G0650 Trochodendron aralioides HOM05D000188 ORTHO05D003976 1.6e-135 486.5 326 74.5
Nn1g00076 Nelumbo nucifera HOM05D000188 ORTHO05D003976 2.1e-135 486.1 326 74.5
Nn1g00669 Nelumbo nucifera HOM05D000188 ORTHO05D003976 2.1e-135 486.1 326 74.5
DCAR_005597 Daucus carota HOM05D000188 ORTHO05D003976 2.7e-135 485.7 332 74.1
Nitab4.5_0005487g0030 Nicotiana tabacum HOM05D000188 ORTHO05D003976 3.6e-135 485.3 332 81.3
Sabra03G0056200 Salix brachista HOM05D000188 ORTHO05D003976 4.7e-135 485.0 392 69.4
Gohir.A03G003000 Gossypium hirsutum HOM05D000188 ORTHO05D003976 6.1e-135 484.6 330 81.8
Gohir.A08G160500 Gossypium hirsutum HOM05D000188 ORTHO05D003976 6.1e-135 484.6 328 83.2
TAR629G0968 Trochodendron aralioides HOM05D000188 ORTHO05D003976 6.1e-135 484.6 326 74.8
Atru.chr6.1792 Acer truncatum HOM05D000188 ORTHO05D003976 1.4e-134 483.4 338 82.0
vmacro14146 Vaccinium macrocarpon HOM05D000188 ORTHO05D003976 2.3e-134 482.6 342 73.4
CAN.G572.54 Capsicum annuum HOM05D000188 ORTHO05D003976 6.8e-134 481.1 339 73.2
Nitab4.5_0004832g0040 Nicotiana tabacum HOM05D000188 ORTHO05D003976 2.0e-133 479.6 332 78.3
SGA_v2.0_scaffold6G03173 Striga asiatica HOM05D000188 ORTHO05D003976 2.0e-133 479.6 336 73.5
ECA233G4074 Erigeron canadensis HOM05D000188 ORTHO05D003976 2.6e-133 479.2 344 75.0
MBI04_g03344_MAGBIO Magnolia biondii HOM05D000188 ORTHO05D003976 4.4e-133 478.4 325 73.8
Gorai.006G215300 Gossypium raimondii HOM05D000188 ORTHO05D003976 5.7e-133 478.0 320 75.3
Gohir.A09G197800 Gossypium hirsutum HOM05D000188 ORTHO05D003976 9.8e-133 477.2 320 75.9
PSO782G3028 Papaver somniferum HOM05D000188 ORTHO05D003976 2.8e-132 475.7 332 78.9
PSO063G6653 Papaver somniferum HOM05D000188 ORTHO05D003976 3.7e-132 475.3 332 78.6
Lj8C288T9 Lonicera japonica HOM05D000188 ORTHO05D003976 6.3e-132 474.6 344 74.1
Aqoxy3G02561 Aquilegia oxysepala HOM05D000188 ORTHO05D003976 1.8e-131 473.0 326 82.2
Gohir.D09G192400 Gossypium hirsutum HOM05D000188 ORTHO05D003976 1.8e-131 473.0 320 75.3
CDE06G0953 Ceratophyllum demersum HOM05D000188 ORTHO05D003976 3.5e-130 468.8 330 70.6
Peaxi162Scf00084g00613 Petunia axillaris HOM05D000188 ORTHO05D003976 4.5e-130 468.4 336 72.6
EL10Ac5g12207 Beta vulgaris HOM05D000188 ORTHO05D003976 3.8e-129 465.3 349 74.2
CDE12G0177 Ceratophyllum demersum HOM05D000188 ORTHO05D003976 8.6e-129 464.2 330 70.6
HPP92_014871 Vanilla planifolia HOM05D000188 ORTHO05D003976 8.6e-129 464.2 331 71.3
AUR62007211 Chenopodium quinoa HOM05D000188 ORTHO05D003976 2.5e-128 462.6 350 69.1
Hund14450 Selenicereus undatus HOM05D000188 ORTHO05D003976 4.2e-128 461.8 328 78.0
Rhsim07G0121100 Rhododendron simsii HOM05D000188 ORTHO05D003976 5.5e-128 461.5 401 62.1
Ah.12g053730 Amaranthus hybridus HOM05D000188 ORTHO05D003976 2.1e-127 459.5 352 68.8
Ah.07g199630 Amaranthus hybridus HOM05D000188 ORTHO05D003976 6.8e-126 454.5 348 69.3
AUR62018790 Chenopodium quinoa HOM05D000188 ORTHO05D003976 9.8e-125 450.7 350 68.3
ATR1136G154 Amborella trichopoda HOM05D000188 ORTHO05D003976 2.4e-123 446.0 325 70.8
Zm00001eb105540 Zea mays HOM05D000188 ORTHO05D003976 6.6e-121 438.0 329 72.3
Zm00001eb322020 Zea mays HOM05D000188 ORTHO05D003976 5.6e-120 434.9 326 79.1
Dinv28904 Davidia involucrata HOM05D000188 ORTHO05D003976 1.6e-119 433.3 207 96.6
CiPaw.12G059100 Carya illinoinensis HOM05D000188 ORTHO05D003976 8.0e-119 431.0 207 96.1
CAN.G845.27 Capsicum annuum HOM05D000188 ORTHO05D003976 5.2e-118 428.3 208 95.7
AagrBONN_evm.TU.Sc2ySwM_117.2896 Anthoceros agrestis HOM05D000188 ORTHO05D003976 8.3e-116 421.0 328 65.5
Psat0s4928g0040 Pisum sativum HOM05D000188 ORTHO05D003976 8.3e-116 421.0 219 89.0
Mapoly0029s0126 Marchantia polymorpha HOM05D000188 ORTHO05D003976 2.4e-115 419.5 325 67.4
SEGI_12247 Sequoiadendron giganteum HOM05D000188 ORTHO05D003976 3.0e-113 412.5 328 64.9
SEGI_28600 Sequoiadendron giganteum HOM05D000188 ORTHO05D003976 3.0e-113 412.5 328 64.9
Actinidia25934 Actinidia chinensis HOM05D000188 ORTHO05D003976 8.6e-113 411.0 333 67.3
Nitab4.5_0008709g0020 Nicotiana tabacum HOM05D000188 ORTHO05D003976 1.5e-112 410.2 331 65.0
Pp3c23_9370 Physcomitrium patens HOM05D000188 ORTHO05D003976 9.5e-112 407.5 329 63.8
Pp3c20_16510 Physcomitrium patens HOM05D000188 ORTHO05D003976 1.5e-109 400.2 216 84.3
Oeu039350.3 Olea europaea HOM05D000188 ORTHO05D003976 2.6e-109 399.4 332 62.7
vmacro00364 Vaccinium macrocarpon HOM05D000188 ORTHO05D003976 3.5e-106 389.0 330 67.3
Os07g0495900 Oryza sativa ssp. japonica HOM05D000188 ORTHO05D003976 2.3e-105 386.3 187 94.7
CBR_g8052 Chara braunii HOM05D000188 ORTHO05D003976 5.8e-101 371.7 337 68.0
HPP92_014919 Vanilla planifolia HOM05D000188 ORTHO05D003976 1.3e-100 370.5 177 96.6
CBR_g39626 Chara braunii HOM05D000188 ORTHO05D003976 2.4e-99 366.3 343 69.4
Lj2C248G9 Lonicera japonica HOM05D000188 ORTHO05D003976 9.6e-96 354.4 342 60.5
unitig_22.g5496 Utricularia gibba HOM05D000188 ORTHO05D003976 5.8e-93 345.1 340 57.4
Actinidia10875 Actinidia chinensis HOM05D000188 ORTHO05D003976 1.7e-84 317.0 190 83.7
BcaC03g16918 Brassica carinata HOM05D000188 ORTHO05D003976 1.4e-78 297.4 155 91.0
MD04G1136100 Malus domestica HOM05D000188 ORTHO05D003976 3.1e-78 296.2 142 97.9
Hund11293 Selenicereus undatus HOM05D000188 ORTHO05D003976 3.4e-77 292.7 141 97.2
Cfa026616 Carpinus fangiana HOM05D000188 ORTHO05D003976 1.4e-67 260.8 190 62.1
CiPaw.01G196500 Carya illinoinensis HOM05D000188 ORTHO05D003976 4.6e-66 255.8 129 90.7
Haze_26602 Corylus avellana HOM05D000188 ORTHO05D003976 4.6e-58 229.2 163 61.3
Actinidia31476 Actinidia chinensis HOM05D000188 ORTHO05D003976 7.9e-58 228.4 209 63.6
DCAR_008305 Daucus carota HOM05D000188 ORTHO05D003976 9.7e-56 221.5 108 97.2
PRCOL_00001514 Prasinoderma coloniale HOM05D000188 ORTHO05D003976 1.1e-54 218.0 199 51.3
Cre02.g092500 Chlamydomonas reinhardtii HOM05D000188 ORTHO05D003976 6.5e-52 208.8 187 53.5
MCO10G305 Micromonas commoda HOM05D000188 ORTHO05D003976 1.4e-51 207.6 190 55.8
PGSC0003DMG400034293 Solanum tuberosum HOM05D000188 ORTHO05D003976 3.2e-51 206.5 192 62.0
DCAR_008304 Daucus carota HOM05D000188 ORTHO05D003976 7.9e-50 201.8 207 53.6
C09p29220 Brassica napus HOM05D000188 ORTHO05D003976 2.2e-44 183.7 161 62.1
COL.COLO4_17034 Corchorus olitorius HOM05D000188 ORTHO05D003976 5.5e-43 179.1 139 70.5
Rhsim11G0009100 Rhododendron simsii HOM05D000188 ORTHO05D003976 1.8e-33 147.5 80 90.0
Psat4g136640 Pisum sativum HOM05D000188 ORTHO05D003976 1.2e-24 118.2 61 93.4
Psat4g136680 Pisum sativum HOM05D000188 ORTHO05D003976 1.4e-22 111.3 61 88.5
BcaC03g16917 Brassica carinata HOM05D000188 ORTHO05D003976 5.9e-21 105.9 64 78.1
C09p29210 Brassica napus HOM05D000188 ORTHO05D041154 2.0e-08 64.3 146 34.9
BolC9t55781H Brassica oleracea HOM05D000188 ORTHO05D041154 4.9e-07 59.7 137 33.6


User provided reference genes

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