Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG10G006060 Citrullus lanatus HOM05D000216 ORTHO05D001131 3.7e-45 184.5 92 100.0
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 1.6e-19 99.4 48 97.9
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 1.6e-19 99.4 48 97.9
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 1.3e-18 96.3 48 95.8
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 1.7e-18 95.9 48 91.7
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 2.9e-18 95.1 48 89.6
Sc13g0006970 Simmondsia chinensis HOM05D000216 ORTHO05D001131 2.9e-18 95.1 48 89.6
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 2.9e-18 95.1 48 89.6
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 2.9e-18 95.1 48 89.6
arahy.Tifrunner.gnm1.ann1.J2QZCX Arachis hypogaea HOM05D000216 ORTHO05D001131 3.8e-18 94.7 50 86.0
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 3.8e-18 94.7 48 87.5
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 5.0e-18 94.4 48 89.6
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 5.0e-18 94.4 48 89.6
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 5.0e-18 94.4 48 89.6
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 6.5e-18 94.0 48 89.6
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 6.5e-18 94.0 48 89.6
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 6.5e-18 94.0 48 89.6
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 6.5e-18 94.0 48 89.6
Hma1.2p1_0094F.1_g047108 Hydrangea macrophylla HOM05D000216 ORTHO05D001131 6.5e-18 94.0 48 87.5
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 6.5e-18 94.0 48 89.6
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 8.5e-18 93.6 48 89.6
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 8.5e-18 93.6 47 89.4
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 8.5e-18 93.6 48 87.5
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.1e-17 93.2 48 87.5
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 1.1e-17 93.2 48 87.5
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.1e-17 93.2 48 85.4
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 1.1e-17 93.2 48 89.6
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 1.1e-17 93.2 48 89.6
Lj2A1238G119 Lonicera japonica HOM05D000216 ORTHO05D001131 1.5e-17 92.8 48 87.5
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 1.5e-17 92.8 48 87.5
Nn020s41502 Nelumbo nucifera HOM05D000216 ORTHO05D001131 1.9e-17 92.4 48 85.4
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 1.9e-17 92.4 48 85.4
SGA_v2.0_scaffold119G32686 Striga asiatica HOM05D000216 ORTHO05D001131 1.9e-17 92.4 48 87.5
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 7.2e-17 90.5 63 69.8
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 7.2e-17 90.5 48 85.4
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 9.5e-17 90.1 47 87.2
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 1.2e-16 89.7 48 85.4
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 1.2e-16 89.7 48 85.4
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 1.2e-16 89.7 48 85.4
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 1.2e-16 89.7 48 85.4
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 1.2e-16 89.7 48 85.4
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 1.2e-16 89.7 48 85.4
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 1.2e-16 89.7 48 85.4
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 1.2e-16 89.7 48 85.4
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 1.2e-16 89.7 48 85.4
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 1.2e-16 89.7 48 85.4
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 1.6e-16 89.4 48 83.3
Nitab4.5_0007104g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 1.6e-16 89.4 48 83.3
Gorai.008G086500 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.1e-16 89.0 48 85.4
HanXRQChr05g0139701 Helianthus annuus HOM05D000216 ORTHO05D001131 2.8e-16 88.6 47 87.2
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.8e-16 88.6 47 87.2
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 2.8e-16 88.6 47 87.2
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 2.8e-16 88.6 47 87.2
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 2.8e-16 88.6 47 85.1
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 2.8e-16 88.6 47 85.1
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 3.6e-16 88.2 48 83.3
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 4.7e-16 87.8 48 81.2
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-16 87.4 48 83.3
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 1.8e-15 85.9 48 81.2
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 5.2e-15 84.3 42 90.5
CAN.G358.145 Capsicum annuum HOM05D000216 ORTHO05D001131 6.8e-15 84.0 42 90.5
AUR62024083 Chenopodium quinoa HOM05D000216 ORTHO05D001131 6.8e-15 84.0 42 90.5
Ca_05611_v3 Cicer arietinum L. HOM05D000216 ORTHO05D001131 8.8e-15 83.6 42 88.1
Lj2A1239T199 Lonicera japonica HOM05D000216 ORTHO05D001131 1.5e-14 82.8 42 88.1
ClCG10G005980 Citrullus lanatus HOM05D000216 ORTHO05D013308 2.0e-14 82.4 41 95.1
CAN.G1082.2 Capsicum annuum HOM05D000216 ORTHO05D001131 2.6e-14 82.0 42 88.1
Psat7g026840 Pisum sativum HOM05D000216 ORTHO05D001131 5.7e-14 80.9 42 85.7
QL11p015550 Quercus lobata HOM05D000216 ORTHO05D001131 5.7e-14 80.9 42 88.1
Ah.10g027890 Amaranthus hybridus HOM05D000216 ORTHO05D001131 9.8e-14 80.1 42 85.7
Ah.10g028290 Amaranthus hybridus HOM05D000216 ORTHO05D001131 9.8e-14 80.1 42 85.7
Gohir.A07G155805 Gossypium hirsutum HOM05D000216 ORTHO05D001131 9.8e-14 80.1 43 83.7
Psat1g084320 Pisum sativum HOM05D000216 ORTHO05D001131 1.3e-13 79.7 42 85.7
HanXRQChr11g0326601 Helianthus annuus HOM05D000216 ORTHO05D001131 2.2e-13 79.0 42 85.7
HanXRQChr16g0503971 Helianthus annuus HOM05D000216 ORTHO05D001131 2.2e-13 79.0 42 85.7
Lsat_1_v5_gn_8_1800 Lactuca sativa HOM05D000216 ORTHO05D001131 2.2e-13 79.0 42 85.7
vmacro22402 Vaccinium macrocarpon HOM05D000216 ORTHO05D001131 2.2e-13 79.0 42 83.3
Gohir.D07G126525 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.8e-13 78.6 42 85.7
Gorai.001G136600 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.8e-13 78.6 42 85.7
ATR0329G029 Amborella trichopoda HOM05D000216 ORTHO05D001131 3.7e-13 78.2 42 81.0
Hund28279 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.3e-13 77.4 42 83.3
Hund28413 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.3e-13 77.4 42 83.3
Hund28556 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.3e-13 77.4 42 83.3
Hund29340 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.3e-13 77.4 42 83.3
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 8.3e-13 77.0 40 87.5
Gohir.D12G077902 Gossypium hirsutum HOM05D000216 ORTHO05D001131 8.3e-13 77.0 42 83.3
Lalb_Chr23g0274591 Lupinus albus HOM05D000216 ORTHO05D013308 8.3e-13 77.0 60 63.3
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.1e-12 76.6 48 70.8
ClCG10G008040 Citrullus lanatus HOM05D000216 ORTHO05D013308 2.4e-12 75.5 39 92.3
SalBow2G3505 Salvia bowleyana HOM05D000216 ORTHO05D001131 4.5e-11 71.2 36 88.9
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 3.8e-10 68.2 31 100.0
ATR0427G001 Amborella trichopoda HOM05D000216 ORTHO05D001131 3.3e-09 65.1 31 93.5
BolC1t03450H Brassica oleracea HOM05D000216 ORTHO05D001131 9.5e-09 63.5 32 87.5
SGA_v2.0_scaffold12G06131 Striga asiatica HOM05D000216 ORTHO05D001131 9.5e-09 63.5 37 78.4
C01p34840 Brassica napus HOM05D000216 ORTHO05D001131 1.2e-08 63.2 31 90.3
Gorai.005G167700 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.2e-08 63.2 42 73.8
SEGI_16956 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 2.8e-08 62.0 48 58.3
SEGI_22877 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 2.8e-08 62.0 48 58.3
SMO086G0059 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.1e-08 60.8 48 52.1
SMO113G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.1e-08 60.8 48 52.1
SMO161G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.1e-08 60.8 48 52.1
SMO168G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.1e-08 60.8 48 52.1
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 8.0e-08 60.5 50 64.0
C01p34920 Brassica napus HOM05D000216 ORTHO05D001131 5.2e-07 57.8 27 92.6
arahy.Tifrunner.gnm1.ann1.V1C6S4 Arachis hypogaea HOM05D000216 ORTHO05D001131 8.9e-07 57.0 27 92.6
Nitab4.5_0001468g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 8.9e-07 57.0 39 69.2
Hma1.2p1_1823F.1_g304330 Hydrangea macrophylla HOM05D000216 ORTHO05D013308 3.4e-06 55.1 39 66.7


User provided reference genes

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