Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024653 Carpinus fangiana HOM05D005600 ORTHO05D006682 0.0e+00 1543.1 791 100.0
PSO210G6637 Papaver somniferum HOM05D005600 ORTHO05D006682 1.5e-33 149.1 686 21.1
Mapoly0005s0051 Marchantia polymorpha HOM05D005600 ORTHO05D006682 2.5e-33 148.3 647 21.5
PSO832G1901 Papaver somniferum HOM05D005600 ORTHO05D006682 7.3e-33 146.7 688 21.5
Gorai.013G252000 Gossypium raimondii HOM05D005600 ORTHO05D006682 1.6e-32 145.6 634 22.6
Sopen10g001510 Solanum pennellii HOM05D005600 ORTHO05D006682 1.6e-32 145.6 658 22.6
Solyc10g005530.3 Solanum lycopersicum HOM05D005600 ORTHO05D006682 2.1e-32 145.2 658 22.6
Gohir.D13G221000 Gossypium hirsutum HOM05D005600 ORTHO05D006682 3.6e-32 144.4 634 22.4
SMO236G0107 Selaginella moellendorffii HOM05D005600 ORTHO05D006682 4.7e-32 144.1 678 22.1
AUR62021465 Chenopodium quinoa HOM05D005600 ORTHO05D006682 1.4e-31 142.5 683 22.7
Gohir.A13G217400 Gossypium hirsutum HOM05D005600 ORTHO05D006682 1.4e-31 142.5 650 21.8
MD03G1169700 Malus domestica HOM05D005600 ORTHO05D006682 2.4e-31 141.7 638 22.1
AUR62010954 Chenopodium quinoa HOM05D005600 ORTHO05D006682 5.2e-31 140.6 683 22.3
FAN16G1158 Fragaria x ananassa HOM05D005600 ORTHO05D006682 2.0e-30 138.7 675 22.7
ATR0618G105 Amborella trichopoda HOM05D005600 ORTHO05D006682 4.4e-30 137.5 637 22.0
CAN.G492.77 Capsicum annuum HOM05D005600 ORTHO05D006682 4.4e-30 137.5 658 22.3
Sed0013981 Sechium edule HOM05D005600 ORTHO05D006682 4.4e-30 137.5 641 22.3
Os03g0347200 Oryza sativa ssp. japonica HOM05D005600 ORTHO05D006682 7.6e-30 136.7 680 21.8
Thecc.09G241700 Theobroma cacao HOM05D005600 ORTHO05D006682 9.9e-30 136.3 652 22.2
Peaxi162Scf00666g00008 Petunia axillaris HOM05D005600 ORTHO05D006682 3.8e-29 134.4 644 22.7
RcHm_v2.0_Chr5g0051141 Rosa chinensis HOM05D005600 ORTHO05D006682 6.4e-29 133.7 675 22.2
Duzib168G1213 Durio zibethinus HOM05D005600 ORTHO05D006682 8.4e-29 133.3 608 21.9
FvH4_3g28270 Fragaria vesca HOM05D005600 ORTHO05D006682 1.4e-28 132.5 677 21.9
Lsat_1_v5_gn_7_110720 Lactuca sativa HOM05D005600 ORTHO05D006682 1.4e-28 132.5 617 21.6
Lalb_Chr22g0359901 Lupinus albus HOM05D005600 ORTHO05D006682 2.4e-28 131.7 684 20.6
Actinidia35417 Actinidia chinensis HOM05D005600 ORTHO05D006682 3.2e-28 131.3 649 21.9
Ciclev10014237m.g Citrus clementina HOM05D005600 ORTHO05D006682 3.2e-28 131.3 681 21.9
FAN21G1558 Fragaria x ananassa HOM05D005600 ORTHO05D006682 3.2e-28 131.3 664 21.8
QL01p017999 Quercus lobata HOM05D005600 ORTHO05D006682 3.2e-28 131.3 652 20.6
Prupe.4G257300 Prunus persica HOM05D005600 ORTHO05D006682 4.2e-28 131.0 634 22.4
FAN25G1678 Fragaria x ananassa HOM05D005600 ORTHO05D006682 9.3e-28 129.8 667 21.9
Psat3g093920 Pisum sativum HOM05D005600 ORTHO05D006682 9.3e-28 129.8 637 21.0
EL10Ac2g02904 Beta vulgaris HOM05D005600 ORTHO05D006682 1.2e-27 129.4 682 21.0
CSS0000494 Camellia sinensis var. sinensis HOM05D005600 ORTHO05D006682 1.2e-27 129.4 648 20.5
CSS0013631 Camellia sinensis var. sinensis HOM05D005600 ORTHO05D006682 1.2e-27 129.4 648 20.5
TPR.G17475 Trifolium pratense HOM05D005600 ORTHO05D006682 1.2e-27 129.4 723 21.3
Lalb_Chr14g0364031 Lupinus albus HOM05D005600 ORTHO05D006682 2.1e-27 128.6 672 20.8
GSVIVG01037230001 Vitis vinifera HOM05D005600 ORTHO05D006682 2.1e-27 128.6 665 19.8
Zm00001eb016670 Zea mays HOM05D005600 ORTHO05D006682 2.1e-27 128.6 325 28.0
Cfa009829 Carpinus fangiana HOM05D005600 ORTHO05D006682 2.7e-27 128.3 645 21.6
CiPaw.13G153300 Carya illinoinensis HOM05D005600 ORTHO05D006682 2.7e-27 128.3 657 21.6
Hma1.2p1_0151F.1_g067170 Hydrangea macrophylla HOM05D005600 ORTHO05D006682 2.7e-27 128.3 647 20.7
Aqoxy5G00694 Aquilegia oxysepala HOM05D005600 ORTHO05D006682 3.5e-27 127.9 664 20.0
CANSAT54G1315 Cannabis sativa HOM05D005600 ORTHO05D006682 4.6e-27 127.5 647 22.1
MELO3C015158.2 Cucumis melo HOM05D005600 ORTHO05D006682 4.6e-27 127.5 655 20.5
CsaV3_1G043080 Cucumis sativus L. HOM05D005600 ORTHO05D006682 4.6e-27 127.5 655 20.5
ECA236G4915 Erigeron canadensis HOM05D005600 ORTHO05D006682 4.6e-27 127.5 608 20.9
HanXRQChr11g0335621 Helianthus annuus HOM05D005600 ORTHO05D006682 4.6e-27 127.5 656 20.9
THA.LOC104800443 Tarenaya hassleriana HOM05D005600 ORTHO05D006682 4.6e-27 127.5 790 22.4
Dinv19587 Davidia involucrata HOM05D005600 ORTHO05D006682 7.8e-27 126.7 649 22.5
FAN11G1201 Fragaria x ananassa HOM05D005600 ORTHO05D006682 7.8e-27 126.7 698 21.8
Sc24g0002960 Simmondsia chinensis HOM05D005600 ORTHO05D006682 7.8e-27 126.7 647 21.9
TAR626G1503 Trochodendron aralioides HOM05D005600 ORTHO05D006682 1.0e-26 126.3 637 22.8
Ah.14g082360 Amaranthus hybridus HOM05D005600 ORTHO05D006682 1.3e-26 125.9 676 21.7
Glyma.19G101600 Glycine max HOM05D005600 ORTHO05D006682 1.7e-26 125.6 655 21.2
Lj1g0020466 Lotus japonicus HOM05D005600 ORTHO05D006682 1.7e-26 125.6 594 20.5
Pp3c5_6600 Physcomitrium patens HOM05D005600 ORTHO05D006682 3.0e-26 124.8 818 22.0
Medtr7g083840 Medicago truncatula HOM05D005600 ORTHO05D006682 3.9e-26 124.4 689 20.3
Pp3c6_18600 Physcomitrium patens HOM05D005600 ORTHO05D006682 5.1e-26 124.0 794 22.0
Nitab4.5_0003777g0050 Nicotiana tabacum HOM05D005600 ORTHO05D006682 8.7e-26 123.2 640 23.3
Nn3g21398 Nelumbo nucifera HOM05D005600 ORTHO05D006682 1.1e-25 122.9 626 20.8
arahy.Tifrunner.gnm1.ann1.ZCX2T9 Arachis hypogaea HOM05D005600 ORTHO05D006682 1.9e-25 122.1 618 21.4
Cc05_g16390 Coffea canephora HOM05D005600 ORTHO05D006682 1.9e-25 122.1 655 20.8
arahy.Tifrunner.gnm1.ann1.VD4ZCS Arachis hypogaea HOM05D005600 ORTHO05D006682 2.5e-25 121.7 618 21.2
PGR102G0248 Punica granatum HOM05D005600 ORTHO05D006682 2.5e-25 121.7 676 21.3
Carub.0003s2803 Capsella rubella HOM05D005600 ORTHO05D006682 3.3e-25 121.3 668 21.9
MD11G1186900 Malus domestica HOM05D005600 ORTHO05D006682 3.3e-25 121.3 318 27.4
Atru.chr10.6 Acer truncatum HOM05D005600 ORTHO05D006682 4.3e-25 120.9 805 21.1
Manes.06G161000 Manihot esculenta HOM05D005600 ORTHO05D006682 5.6e-25 120.6 649 20.6
Rhsim04G0002900 Rhododendron simsii HOM05D005600 ORTHO05D006682 9.6e-25 119.8 483 23.4
vmacro09771 Vaccinium macrocarpon HOM05D005600 ORTHO05D006682 9.6e-25 119.8 317 25.6
Atru.chr10.100 Acer truncatum HOM05D005600 ORTHO05D006682 1.3e-24 119.4 798 21.3
Atru.chr10.118 Acer truncatum HOM05D005600 ORTHO05D006682 1.3e-24 119.4 798 21.3
unitig_37.g12201 Utricularia gibba HOM05D005600 ORTHO05D006682 1.3e-24 119.4 614 21.2
TWI39G0768 Tripterygium wilfordii HOM05D005600 ORTHO05D006682 1.6e-24 119.0 650 21.4
BraA03t13632Z Brassica rapa HOM05D005600 ORTHO05D006682 6.2e-24 117.1 798 20.9
Migut.M01525 Erythranthe guttata HOM05D005600 ORTHO05D006682 6.2e-24 117.1 692 20.5
DCAR_009654 Daucus carota HOM05D005600 ORTHO05D006682 8.1e-24 116.7 681 21.0
MCO11G503 Micromonas commoda HOM05D005600 ORTHO05D006682 8.1e-24 116.7 281 25.6
Phvul.001G086100 Phaseolus vulgaris HOM05D005600 ORTHO05D006682 1.4e-23 115.9 342 25.4
ClCG03G012970 Citrullus lanatus HOM05D005600 ORTHO05D006682 1.8e-23 115.5 322 24.8
BcaC01g03123 Brassica carinata HOM05D005600 ORTHO05D006682 2.4e-23 115.2 790 21.5
C03p55830 Brassica napus HOM05D005600 ORTHO05D006682 2.4e-23 115.2 790 21.5
BolC3t17864H Brassica oleracea HOM05D005600 ORTHO05D006682 2.4e-23 115.2 790 21.5
CARHR104840 Cardamine hirsuta HOM05D005600 ORTHO05D006682 2.4e-23 115.2 722 22.0
Thhalv10022549m.g Eutrema salsugineum HOM05D005600 ORTHO05D006682 2.4e-23 115.2 781 21.3
HPP92_006936 Vanilla planifolia HOM05D005600 ORTHO05D006682 4.0e-23 114.4 346 25.1
Aa31sc869G10 Aethionema arabicum HOM05D005600 ORTHO05D006682 9.0e-23 113.2 618 22.8
A03p44950 Brassica napus HOM05D005600 ORTHO05D006682 9.0e-23 113.2 798 20.9
CBR_g4015 Chara braunii HOM05D005600 ORTHO05D006682 9.0e-23 113.2 722 21.1
Cpa.g.sc84.9 Carica papaya HOM05D005600 ORTHO05D006682 1.5e-22 112.5 313 24.6
AT2G13540 Arabidopsis thaliana HOM05D005600 ORTHO05D006682 2.6e-22 111.7 671 21.3
Glyma.16G049600 Glycine max HOM05D005600 ORTHO05D006682 4.4e-22 110.9 399 25.1
Hma1.2p1_0151F.1_g067180 Hydrangea macrophylla HOM05D005600 ORTHO05D006682 4.4e-22 110.9 323 24.8
BcaB08g34531 Brassica carinata HOM05D005600 ORTHO05D006682 7.6e-22 110.2 674 21.5
PRCOL_00004432 Prasinoderma coloniale HOM05D005600 ORTHO05D006682 9.9e-22 109.8 309 27.2
Haze_23192 Corylus avellana HOM05D005600 ORTHO05D006682 1.3e-21 109.4 685 20.0
AL3G45350 Arabidopsis lyrata HOM05D005600 ORTHO05D006682 1.7e-21 109.0 344 24.4
Ca_08130_v3 Cicer arietinum L. HOM05D005600 ORTHO05D006682 1.7e-21 109.0 320 23.8
MSTRG.23390 Avicennia marina HOM05D005600 ORTHO05D006682 2.2e-21 108.6 676 20.1
Oeu027716.3 Olea europaea HOM05D005600 ORTHO05D006682 2.9e-21 108.2 315 23.8
SEGI_34765 Sequoiadendron giganteum HOM05D005600 ORTHO05D006682 1.1e-20 106.3 365 26.3
SalBow8G4663 Salvia bowleyana HOM05D005600 ORTHO05D006682 1.9e-20 105.5 469 21.5
Potri.009G049200 Populus trichocarpa HOM05D005600 ORTHO05D006682 5.4e-20 104.0 640 22.3
Eucgr.B03713 Eucalyptus grandis HOM05D005600 ORTHO05D006682 3.5e-19 101.3 469 23.7
CDE10G0769 Ceratophyllum demersum HOM05D005600 ORTHO05D006682 2.5e-17 95.1 123 35.8
CSS0009005 Camellia sinensis var. sinensis HOM05D005600 ORTHO05D006682 7.4e-17 93.6 481 21.2
Nitab4.5_0008957g0040 Nicotiana tabacum HOM05D005600 ORTHO05D006682 1.3e-16 92.8 285 26.7
Sabra09G0035700 Salix brachista HOM05D005600 ORTHO05D006682 4.8e-16 90.9 118 35.6
Sp3g26950 Schrenkiella parvula HOM05D005600 ORTHO05D006682 2.4e-15 88.6 470 23.2
COL.COLO4_36487 Corchorus olitorius HOM05D005600 ORTHO05D006682 1.5e-14 85.9 318 23.6
Lj2A14G43 Lonicera japonica HOM05D005600 ORTHO05D006682 5.8e-14 84.0 381 21.5
Cre12.g524100 Chlamydomonas reinhardtii HOM05D005600 ORTHO05D006682 2.2e-13 82.0 129 31.0
BcaC04g23081 Brassica carinata HOM05D005600 ORTHO05D006682 1.9e-12 79.0 195 25.6
C09p12340 Brassica napus HOM05D005600 ORTHO05D006682 4.2e-12 77.8 96 38.5
SHI27472 Sapria himalayana HOM05D005600 ORTHO05D006682 7.1e-12 77.0 133 32.3
SGA_v2.0_scaffold7G03609 Striga asiatica HOM05D005600 ORTHO05D006682 8.7e-10 70.1 430 21.9
VMungo1383G0719 Vigna mungo HOM05D005600 ORTHO05D006682 2.5e-09 68.6 264 23.1


User provided reference genes

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