Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g18430 Coffea canephora HOM05D006129 ORTHO05D007446 2.8e-117 425.2 210 100.0
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 1.2e-51 207.2 188 55.9
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 1.5e-49 200.3 159 59.1
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 1.9e-49 199.9 150 62.0
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 5.6e-49 198.4 150 63.3
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 7.3e-49 198.0 225 48.4
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 7.3e-49 198.0 187 55.1
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 4.8e-48 195.3 171 55.0
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 4.8e-48 195.3 171 57.9
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 6.2e-48 194.9 171 55.0
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 2.4e-47 193.0 199 50.8
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 3.1e-47 192.6 204 47.5
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 4.0e-47 192.2 146 59.6
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 4.0e-47 192.2 153 62.1
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 6.9e-47 191.4 200 53.0
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 9.0e-47 191.0 171 57.9
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 9.0e-47 191.0 150 58.7
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 1.2e-46 190.7 164 56.7
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 2.6e-46 189.5 171 53.8
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 2.6e-46 189.5 136 63.2
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 2.6e-46 189.5 136 63.2
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 2.6e-46 189.5 201 50.7
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 2.6e-46 189.5 154 61.7
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 2.6e-46 189.5 174 55.7
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 3.4e-46 189.1 165 59.4
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 4.5e-46 188.7 200 50.5
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 4.5e-46 188.7 176 54.0
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 4.5e-46 188.7 177 56.5
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 5.8e-46 188.3 163 55.8
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 7.6e-46 188.0 156 56.4
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 9.9e-46 187.6 159 59.7
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 9.9e-46 187.6 128 65.6
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 9.9e-46 187.6 157 57.3
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 1.3e-45 187.2 201 50.2
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 1.7e-45 186.8 186 52.7
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 1.7e-45 186.8 116 70.7
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 2.2e-45 186.4 212 52.4
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 2.2e-45 186.4 202 50.5
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 2.2e-45 186.4 164 57.3
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 2.9e-45 186.0 216 48.1
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 2.9e-45 186.0 150 59.3
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 2.9e-45 186.0 156 61.5
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 6.4e-45 184.9 170 57.6
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 6.4e-45 184.9 167 54.5
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 8.4e-45 184.5 108 74.1
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 1.1e-44 184.1 166 57.8
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 1.1e-44 184.1 144 61.1
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 1.4e-44 183.7 178 53.4
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 1.9e-44 183.3 185 50.8
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 2.4e-44 183.0 191 53.4
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 7.1e-44 181.4 202 51.0
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 1.2e-43 180.6 119 63.9
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 4.6e-43 178.7 102 74.5
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 6.0e-43 178.3 233 46.8
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 6.0e-43 178.3 159 54.1
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 7.9e-43 177.9 146 61.6
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 7.9e-43 177.9 207 48.3
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 1.0e-42 177.6 150 56.0
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 3.0e-42 176.0 165 53.9
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 8.7e-42 174.5 160 53.8
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 8.7e-42 174.5 151 58.9
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 1.9e-41 173.3 156 57.7
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 5.6e-41 171.8 121 65.3
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 7.4e-41 171.4 99 73.7
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 1.3e-40 170.6 99 73.7
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 1.6e-40 170.2 101 69.3
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 1.6e-40 170.2 177 51.4
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 1.6e-40 170.2 92 77.2
arahy.Tifrunner.gnm1.ann1.SUMB0F Arachis hypogaea HOM05D006129 ORTHO05D007446 3.7e-40 169.1 172 54.1
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 3.7e-40 169.1 113 63.7
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 4.8e-40 168.7 126 60.3
TAR629G1760 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.1e-39 167.5 207 46.4
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 1.8e-39 166.8 115 64.3
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 5.3e-39 165.2 101 68.3
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 1.5e-38 163.7 102 66.7
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 2.0e-38 163.3 125 61.6
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 2.0e-38 163.3 203 46.8
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 7.6e-38 161.4 92 72.8
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 7.6e-38 161.4 92 71.7
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 1.3e-37 160.6 125 60.0
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 2.2e-37 159.8 218 42.7
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 2.9e-37 159.5 222 43.7
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 3.8e-37 159.1 95 66.3
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 6.5e-37 158.3 125 56.8
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 6.5e-37 158.3 122 58.2
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 6.5e-37 158.3 125 56.8
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 6.5e-37 158.3 125 56.8
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 6.5e-37 158.3 122 58.2
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 8.4e-37 157.9 202 45.5
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 8.4e-37 157.9 136 54.4
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 8.4e-37 157.9 179 46.9
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 2.5e-36 156.4 127 59.1
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 2.5e-36 156.4 149 52.3
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 3.2e-36 156.0 149 52.3
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 3.2e-36 156.0 155 51.0
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 3.2e-36 156.0 226 41.6
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 7.9e-35 151.4 194 43.3
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 2.3e-34 149.8 96 64.6
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 5.8e-30 135.2 101 57.4
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 2.9e-29 132.9 172 47.1
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 1.9e-28 130.2 125 52.8
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 2.1e-27 126.7 152 44.7
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 4.3e-25 119.0 162 42.6
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 1.3e-24 117.5 107 55.1
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.3e-24 117.5 120 48.3
QL11p038477 Quercus lobata HOM05D006129 ORTHO05D007446 1.6e-24 117.1 70 71.4
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 5.3e-23 112.1 60 76.7
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 2.6e-22 109.8 60 75.0
Atru.chr5.2820 Acer truncatum HOM05D006129 ORTHO05D007446 1.1e-17 94.4 85 52.9
RcHm_v2.0_Chr6g0302241 Rosa chinensis HOM05D006129 ORTHO05D007446 3.3e-17 92.8 61 65.6
TAR371G0992 Trochodendron aralioides HOM05D006129 ORTHO05D007446 6.3e-16 88.6 152 35.5
Pp3c16_23700 Physcomitrium patens HOM05D006129 ORTHO05D007446 1.8e-15 87.0 80 50.0
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 2.4e-15 86.7 87 43.7
RcHm_v2.0_Chr1g0376021 Rosa chinensis HOM05D006129 ORTHO05D007446 4.1e-15 85.9 51 70.6
RcHm_v2.0_Chr2g0152801 Rosa chinensis HOM05D006129 ORTHO05D007446 9.1e-15 84.7 59 67.8
Pp3c25_10050 Physcomitrium patens HOM05D006129 ORTHO05D007446 8.5e-13 78.2 82 43.9
Mapoly0036s0055 Marchantia polymorpha HOM05D006129 ORTHO05D007446 2.5e-12 76.6 80 40.0
SMO356G0628 Selaginella moellendorffii HOM05D006129 ORTHO05D007446 3.6e-11 72.8 106 34.0
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis HOM05D006129 ORTHO05D007446 7.0e-07 58.5 84 33.3


User provided reference genes

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