Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29315_v3 Cicer arietinum L. HOM05D004358 ORTHO05D004960 2.5e-212 741.9 389 100.0
PRCOL_00001550 Prasinoderma coloniale HOM05D004358 ORTHO05D004960 2.5e-26 124.0 148 47.3
Cre17.g732050 Chlamydomonas reinhardtii HOM05D004358 ORTHO05D004960 1.5e-23 114.8 158 41.1
AUR62015399 Chenopodium quinoa HOM05D004358 ORTHO05D004960 6.8e-16 89.4 142 34.5
Solyc06g073400.3 Solanum lycopersicum HOM05D004358 ORTHO05D004960 8.9e-16 89.0 140 34.3
Sopen06g029780 Solanum pennellii HOM05D004358 ORTHO05D004960 8.9e-16 89.0 140 34.3
AUR62002292 Chenopodium quinoa HOM05D004358 ORTHO05D004960 1.5e-15 88.2 142 35.2
unitig_8.g4603 Utricularia gibba HOM05D004358 ORTHO05D004960 3.4e-15 87.0 140 34.3
A09p67250 Brassica napus HOM05D004358 ORTHO05D004960 4.4e-15 86.7 152 34.2
BraA09t42058Z Brassica rapa HOM05D004358 ORTHO05D005739 4.4e-15 86.7 152 34.2
Carub.0001s0527 Capsella rubella HOM05D004358 ORTHO05D004960 4.4e-15 86.7 152 34.9
Phvul.011G055100 Phaseolus vulgaris HOM05D004358 ORTHO05D004960 4.4e-15 86.7 154 33.1
AL1G15860 Arabidopsis lyrata HOM05D004358 ORTHO05D004960 5.8e-15 86.3 152 34.9
BcaC07g42102 Brassica carinata HOM05D004358 ORTHO05D004960 5.8e-15 86.3 152 34.2
C08p51540 Brassica napus HOM05D004358 ORTHO05D004960 5.8e-15 86.3 152 34.2
BolC8t52682H Brassica oleracea HOM05D004358 ORTHO05D004960 5.8e-15 86.3 152 34.2
Thhalv10007955m.g Eutrema salsugineum HOM05D004358 ORTHO05D004960 5.8e-15 86.3 153 33.3
Peaxi162Scf00375g00513 Petunia axillaris HOM05D004358 ORTHO05D004960 5.8e-15 86.3 151 31.8
SalBow7G0323 Salvia bowleyana HOM05D004358 ORTHO05D004960 5.8e-15 86.3 142 33.1
CAN.G65.181 Capsicum annuum HOM05D004358 ORTHO05D004960 7.5e-15 85.9 140 33.6
CARHR005460 Cardamine hirsuta HOM05D004358 ORTHO05D004960 7.5e-15 85.9 152 34.2
RcHm_v2.0_Chr4g0407021 Rosa chinensis HOM05D004358 ORTHO05D004960 9.8e-15 85.5 140 32.9
VMungo1127G0908 Vigna mungo HOM05D004358 ORTHO05D004960 9.8e-15 85.5 154 32.5
Nitab4.5_0005570g0020 Nicotiana tabacum HOM05D004358 ORTHO05D004960 1.3e-14 85.1 151 32.5
SGA_v2.0_scaffold181G39728 Striga asiatica HOM05D004358 ORTHO05D004960 1.3e-14 85.1 147 33.3
AT1G05900 Arabidopsis thaliana HOM05D004358 ORTHO05D004960 1.7e-14 84.7 152 33.6
SMO347G0587 Selaginella moellendorffii HOM05D004358 ORTHO05D004960 3.7e-14 83.6 146 32.2
Atru.chr3.1531 Acer truncatum HOM05D004358 ORTHO05D004960 4.9e-14 83.2 142 33.8
CsaV3_4G003300 Cucumis sativus L. HOM05D004358 ORTHO05D004960 4.9e-14 83.2 152 32.2
HanXRQChr06g0172341 Helianthus annuus HOM05D004358 ORTHO05D004960 4.9e-14 83.2 134 33.6
Lsat_1_v5_gn_8_80540 Lactuca sativa HOM05D004358 ORTHO05D004960 4.9e-14 83.2 136 33.1
GSVIVG01010748001 Vitis vinifera HOM05D004358 ORTHO05D004960 4.9e-14 83.2 140 32.9
Actinidia39855 Actinidia chinensis HOM05D004358 ORTHO05D004960 6.4e-14 82.8 154 31.8
FAN12G1706 Fragaria x ananassa HOM05D004358 ORTHO05D004960 6.4e-14 82.8 139 32.4
Glyma.11G128600 Glycine max HOM05D004358 ORTHO05D004960 6.4e-14 82.8 142 32.4
FvH4_4g10690 Fragaria vesca HOM05D004358 ORTHO05D004960 8.3e-14 82.4 139 32.4
FAN07G2248 Fragaria x ananassa HOM05D004358 ORTHO05D004960 8.3e-14 82.4 139 32.4
FAN12G4165 Fragaria x ananassa HOM05D004358 ORTHO05D004960 8.3e-14 82.4 139 32.4
PSO675G5046 Papaver somniferum HOM05D004358 ORTHO05D004960 8.3e-14 82.4 140 32.9
Aqoxy7G00191 Aquilegia oxysepala HOM05D004358 ORTHO05D004960 1.1e-13 82.0 135 32.6
PSO732G0278 Papaver somniferum HOM05D004358 ORTHO05D004960 1.1e-13 82.0 140 32.9
TAR362G1164 Trochodendron aralioides HOM05D004358 ORTHO05D004960 1.1e-13 82.0 142 32.4
CANSAT78G2120 Cannabis sativa HOM05D004358 ORTHO05D004960 1.4e-13 81.6 142 31.7
Ah.13g072910 Amaranthus hybridus HOM05D004358 ORTHO05D004960 1.9e-13 81.3 151 31.8
Aqoxy7G00192 Aquilegia oxysepala HOM05D004358 ORTHO05D004960 1.9e-13 81.3 134 32.8
arahy.Tifrunner.gnm1.ann1.CJKM5C Arachis hypogaea HOM05D004358 ORTHO05D004960 1.9e-13 81.3 154 31.2
EL10Ac3g05922 Beta vulgaris HOM05D004358 ORTHO05D004960 1.9e-13 81.3 145 32.4
Ciclev10020813m.g Citrus clementina HOM05D004358 ORTHO05D004960 1.9e-13 81.3 142 32.4
PSO732G0822 Papaver somniferum HOM05D004358 ORTHO05D004960 1.9e-13 81.3 140 32.9
Potri.007G127600 Populus trichocarpa HOM05D004358 ORTHO05D004960 1.9e-13 81.3 140 32.9
QL10p048514 Quercus lobata HOM05D004358 ORTHO05D004960 1.9e-13 81.3 142 32.4
TWI59G0142 Tripterygium wilfordii HOM05D004358 ORTHO05D004960 1.9e-13 81.3 154 30.5
MELO3C017721.2 Cucumis melo HOM05D004358 ORTHO05D004960 3.2e-13 80.5 152 30.9
Duzib151G0384 Durio zibethinus HOM05D004358 ORTHO05D004960 3.2e-13 80.5 152 32.9
Sabra07G0103600 Salix brachista HOM05D004358 ORTHO05D004960 3.2e-13 80.5 140 32.9
SalBow7G1435 Salvia bowleyana HOM05D004358 ORTHO05D004960 3.2e-13 80.5 136 33.1
BcaC01g05950 Brassica carinata HOM05D004358 ORTHO05D004960 4.1e-13 80.1 152 32.2
A03p17630 Brassica napus HOM05D004358 ORTHO05D004960 4.1e-13 80.1 152 32.2
C03p20720 Brassica napus HOM05D004358 ORTHO05D004960 4.1e-13 80.1 152 32.2
BolC3t14451H Brassica oleracea HOM05D004358 ORTHO05D004960 4.1e-13 80.1 152 32.2
BraA03t11028Z Brassica rapa HOM05D004358 ORTHO05D004960 4.1e-13 80.1 152 32.2
ClCG07G015600 Citrullus lanatus HOM05D004358 ORTHO05D004960 4.1e-13 80.1 140 31.4
Dinv22724 Davidia involucrata HOM05D004358 ORTHO05D004960 4.1e-13 80.1 142 31.7
Phvul.005G152500 Phaseolus vulgaris HOM05D004358 ORTHO05D004960 4.1e-13 80.1 154 31.8
MSTRG.6615 Avicennia marina HOM05D004358 ORTHO05D004960 5.4e-13 79.7 142 32.4
CiPaw.02G055200 Carya illinoinensis HOM05D004358 ORTHO05D004960 5.4e-13 79.7 142 31.7
Ciclev10020816m.g Citrus clementina HOM05D004358 ORTHO05D004960 5.4e-13 79.7 140 31.4
SHI24906 Sapria himalayana HOM05D004358 ORTHO05D004960 5.4e-13 79.7 154 29.2
BcaB01g04044 Brassica carinata HOM05D004358 ORTHO05D004960 7.1e-13 79.3 152 32.2
COL.COLO4_02723 Corchorus olitorius HOM05D004358 ORTHO05D004960 7.1e-13 79.3 152 32.2
Hund03152 Selenicereus undatus HOM05D004358 ORTHO05D004960 7.1e-13 79.3 140 31.4
Aa31LG5G5430 Aethionema arabicum HOM05D004358 ORTHO05D004960 9.2e-13 79.0 140 33.6
Carub.0004s1278 Capsella rubella HOM05D004358 ORTHO05D004960 9.2e-13 79.0 152 32.2
CARHR125100 Cardamine hirsuta HOM05D004358 ORTHO05D004960 9.2e-13 79.0 152 32.2
Ca_01263_v3 Cicer arietinum L. HOM05D004358 ORTHO05D004960 9.2e-13 79.0 142 32.4
MD04G1007400 Malus domestica HOM05D004358 ORTHO05D004960 9.2e-13 79.0 142 31.7
Manes.04G041200 Manihot esculenta HOM05D004358 ORTHO05D004960 9.2e-13 79.0 140 32.1
Prupe.1G191600 Prunus persica HOM05D004358 ORTHO05D004960 9.2e-13 79.0 142 31.0
AL4G26720 Arabidopsis lyrata HOM05D004358 ORTHO05D004960 1.2e-12 78.6 152 32.2
Eucgr.H00376 Eucalyptus grandis HOM05D004358 ORTHO05D004960 1.2e-12 78.6 143 31.5
Lj3g0017360 Lotus japonicus HOM05D004358 ORTHO05D004960 1.2e-12 78.6 142 33.8
THA.LOC104827388 Tarenaya hassleriana HOM05D004358 ORTHO05D004960 1.2e-12 78.6 152 31.6
TAR636G1513 Trochodendron aralioides HOM05D004358 ORTHO05D004960 1.2e-12 78.6 142 31.7
AT2G31450 Arabidopsis thaliana HOM05D004358 ORTHO05D004960 1.6e-12 78.2 152 32.2
Ca_20780_v3 Cicer arietinum L. HOM05D004358 ORTHO05D004960 1.6e-12 78.2 152 30.9
CSS0013619 Camellia sinensis var. sinensis HOM05D004358 ORTHO05D004960 2.1e-12 77.8 152 31.6
Glyma.13G343700 Glycine max HOM05D004358 ORTHO05D004960 2.1e-12 77.8 154 32.5
Medtr4g067060 Medicago truncatula HOM05D004358 ORTHO05D004960 2.1e-12 77.8 157 30.6
Nn1g09578 Nelumbo nucifera HOM05D004358 ORTHO05D004960 2.1e-12 77.8 142 33.1
Cfa015153 Carpinus fangiana HOM05D004358 ORTHO05D004960 2.7e-12 77.4 142 30.3
Lj3g0009399 Lotus japonicus HOM05D004358 ORTHO05D004960 2.7e-12 77.4 142 31.0
TPR.G34203 Trifolium pratense HOM05D004358 ORTHO05D004960 2.7e-12 77.4 157 30.6
ECA236G3148 Erigeron canadensis HOM05D004358 ORTHO05D004960 3.5e-12 77.0 140 32.9
Cc00_g17220 Coffea canephora HOM05D004358 ORTHO05D004960 4.6e-12 76.6 142 31.0
Thhalv10016815m.g Eutrema salsugineum HOM05D004358 ORTHO05D004960 4.6e-12 76.6 152 31.6
ATR0686G198 Amborella trichopoda HOM05D004358 ORTHO05D004960 7.8e-12 75.9 142 31.7
Psat7g213960 Pisum sativum HOM05D004358 ORTHO05D004960 7.8e-12 75.9 157 30.6
Haze_01520 Corylus avellana HOM05D004358 ORTHO05D004960 1.0e-11 75.5 142 31.0
Medtr2g098660 Medicago truncatula HOM05D004358 ORTHO05D004960 1.0e-11 75.5 140 33.6
Sp4g13930 Schrenkiella parvula HOM05D004358 ORTHO05D004960 1.0e-11 75.5 140 30.7
arahy.Tifrunner.gnm1.ann1.VZ0ARL Arachis hypogaea HOM05D004358 ORTHO05D004960 1.7e-11 74.7 142 31.0
CAN.G749.19 Capsicum annuum HOM05D004358 ORTHO05D004960 1.7e-11 74.7 140 31.4
Hund03151 Selenicereus undatus HOM05D004358 ORTHO05D004960 1.7e-11 74.7 151 28.5
Atru.chr3.1534 Acer truncatum HOM05D004358 ORTHO05D004960 2.3e-11 74.3 147 31.3
Nitab4.5_0001787g0060 Nicotiana tabacum HOM05D004358 ORTHO05D004960 2.3e-11 74.3 140 31.4
Sed0019525 Sechium edule HOM05D004358 ORTHO05D004960 2.3e-11 74.3 140 29.3
Solyc09g083003.1 Solanum lycopersicum HOM05D004358 ORTHO05D004960 2.3e-11 74.3 140 31.4
Sopen09g031880 Solanum pennellii HOM05D004358 ORTHO05D004960 2.3e-11 74.3 140 30.7
PGSC0003DMG401006099 Solanum tuberosum HOM05D004358 ORTHO05D004960 2.3e-11 74.3 140 30.7
Peaxi162Scf00058g01717 Petunia axillaris HOM05D004358 ORTHO05D004960 3.0e-11 73.9 140 30.7
Mapoly0058s0068 Marchantia polymorpha HOM05D004358 ORTHO05D004960 3.9e-11 73.6 146 31.5
Rhsim02G0076600 Rhododendron simsii HOM05D004358 ORTHO05D004960 3.9e-11 73.6 184 27.7
AagrBONN_evm.TU.Sc2ySwM_368.679 Anthoceros agrestis HOM05D004358 ORTHO05D004960 1.1e-10 72.0 139 32.4
arahy.Tifrunner.gnm1.ann1.98UW30 Arachis hypogaea HOM05D004358 ORTHO05D004960 1.5e-10 71.6 142 30.3
Pp3c17_17810 Physcomitrium patens HOM05D004358 ORTHO05D004960 1.5e-10 71.6 139 30.9
Gorai.011G146700 Gossypium raimondii HOM05D004358 ORTHO05D004960 5.6e-10 69.7 155 30.3
PGR142G0453 Punica granatum HOM05D004358 ORTHO05D004960 7.3e-10 69.3 158 27.8
Zm00001eb406830 Zea mays HOM05D004358 ORTHO05D004960 7.3e-10 69.3 151 29.8
Nitab4.5_0000941g0030 Nicotiana tabacum HOM05D004358 ORTHO05D004960 2.8e-09 67.4 141 30.5
Thecc.04G185400 Theobroma cacao HOM05D004358 ORTHO05D004960 2.8e-09 67.4 145 28.3
Haze_27447 Corylus avellana HOM05D004358 ORTHO05D004960 4.7e-09 66.6 151 26.5
CBR_g29622 Chara braunii HOM05D004358 ORTHO05D004960 6.2e-09 66.2 144 28.5
ECA236G1172 Erigeron canadensis HOM05D004358 ORTHO05D004960 8.1e-09 65.9 105 34.3
Mapoly0058s0067 Marchantia polymorpha HOM05D004358 ORTHO05D004960 1.1e-08 65.5 146 30.8
Cfa026201 Carpinus fangiana HOM05D004358 ORTHO05D004960 1.8e-08 64.7 144 29.2
Ca_29093_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 2.3e-08 64.3 130 31.5
Migut.M00111 Erythranthe guttata HOM05D004358 ORTHO05D004960 2.3e-08 64.3 102 33.3
vmacro15647 Vaccinium macrocarpon HOM05D004358 ORTHO05D004960 4.0e-08 63.5 146 28.8
arahy.Tifrunner.gnm1.ann1.Z962T9 Arachis hypogaea HOM05D004358 ORTHO05D004960 4.4e-07 60.1 91 35.2
Gohir.D10G133000 Gossypium hirsutum HOM05D004358 ORTHO05D004960 5.8e-07 59.7 120 30.0
DCAR_028139 Daucus carota HOM05D004358 ORTHO05D004960 4.9e-06 56.6 75 38.7


User provided reference genes

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