Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007089 Camellia sinensis var. sinensis HOM05D002168 ORTHO05D002277 1.2e-150 536.6 286 100.0
CSS0021143 Camellia sinensis var. sinensis HOM05D002168 ORTHO05D002277 1.2e-150 536.6 286 100.0
QL02p075394 Quercus lobata HOM05D002168 ORTHO05D002277 9.3e-71 271.2 286 54.9
CSS0007819 Camellia sinensis var. sinensis HOM05D002168 ORTHO05D002277 2.3e-69 266.5 287 56.4
CSS0018850 Camellia sinensis var. sinensis HOM05D002168 ORTHO05D002277 2.3e-69 266.5 287 56.4
Haze_14705 Corylus avellana HOM05D002168 ORTHO05D002277 1.6e-62 243.8 288 52.1
Atru.chr6.2348 Acer truncatum HOM05D002168 ORTHO05D002277 1.3e-61 240.7 287 52.6
Actinidia35760 Actinidia chinensis HOM05D002168 ORTHO05D002277 1.3e-59 234.2 286 49.7
Nitab4.5_0011492g0010 Nicotiana tabacum HOM05D002168 ORTHO05D002277 1.3e-59 234.2 286 49.3
Solyc02g086600.3 Solanum lycopersicum HOM05D002168 ORTHO05D002277 4.8e-59 232.3 286 49.3
Nitab4.5_0002739g0020 Nicotiana tabacum HOM05D002168 ORTHO05D002277 1.1e-58 231.1 286 48.6
Sopen02g031360 Solanum pennellii HOM05D002168 ORTHO05D002277 1.1e-58 231.1 290 49.3
Potri.001G347900 Populus trichocarpa HOM05D002168 ORTHO05D002277 1.4e-58 230.7 286 48.6
TWI56G0079 Tripterygium wilfordii HOM05D002168 ORTHO05D002277 3.1e-58 229.6 286 47.2
Ciclev10014159m.g Citrus clementina HOM05D002168 ORTHO05D002277 1.5e-57 227.3 284 48.9
Cfa007400 Carpinus fangiana HOM05D002168 ORTHO05D002277 2.0e-57 226.9 287 49.5
RcHm_v2.0_Chr2g0172601 Rosa chinensis HOM05D002168 ORTHO05D002277 2.9e-56 223.0 287 49.1
PGSC0003DMG400000516 Solanum tuberosum HOM05D002168 ORTHO05D002277 2.9e-56 223.0 286 49.3
Sabra16G0227400 Salix brachista HOM05D002168 ORTHO05D002277 7.2e-55 218.4 286 46.5
Duzib147G1710 Durio zibethinus HOM05D002168 ORTHO05D002277 1.2e-54 217.6 288 49.3
TWI12G0035 Tripterygium wilfordii HOM05D002168 ORTHO05D002277 2.1e-54 216.9 293 48.1
Thecc.04G014200 Theobroma cacao HOM05D002168 ORTHO05D002277 2.7e-54 216.5 290 47.2
Peaxi162Scf00129g01334 Petunia axillaris HOM05D002168 ORTHO05D002277 3.6e-54 216.1 289 47.8
Prupe.3G288400 Prunus persica HOM05D002168 ORTHO05D002277 4.6e-54 215.7 286 47.6
vmacro18267 Vaccinium macrocarpon HOM05D002168 ORTHO05D002277 4.6e-54 215.7 289 47.4
DCAR_021710 Daucus carota HOM05D002168 ORTHO05D002277 3.9e-53 212.6 289 48.1
CAN.G206.5 Capsicum annuum HOM05D002168 ORTHO05D002277 5.1e-53 212.2 286 47.2
GSVIVG01032436001 Vitis vinifera HOM05D002168 ORTHO05D002277 5.1e-53 212.2 287 48.8
Gohir.D09G027600 Gossypium hirsutum HOM05D002168 ORTHO05D002277 3.3e-52 209.5 290 46.9
Gorai.006G032100 Gossypium raimondii HOM05D002168 ORTHO05D002277 3.3e-52 209.5 290 46.9
PGSC0003DMG400006644 Solanum tuberosum HOM05D002168 ORTHO05D002277 5.7e-52 208.8 286 46.5
Rhsim08G0052300 Rhododendron simsii HOM05D002168 ORTHO05D002277 1.6e-51 207.2 288 45.8
Gohir.A09G028200 Gossypium hirsutum HOM05D002168 ORTHO05D002277 2.8e-51 206.5 290 46.6
Manes.15G166700 Manihot esculenta HOM05D002168 ORTHO05D002277 1.8e-50 203.8 286 44.4
FAN14G2665 Fragaria x ananassa HOM05D002168 ORTHO05D002277 2.4e-50 203.4 287 47.0
FvH4_6g51050 Fragaria vesca HOM05D002168 ORTHO05D002277 5.3e-50 202.2 287 44.9
MBI16_g05474_MAGBIO Magnolia biondii HOM05D002168 ORTHO05D002277 5.3e-50 202.2 288 46.5
Ca_04173_v3 Cicer arietinum L. HOM05D002168 ORTHO05D002277 9.0e-50 201.4 291 45.0
MD17G1031200 Malus domestica HOM05D002168 ORTHO05D002277 2.0e-49 200.3 286 46.2
FAN02G2577 Fragaria x ananassa HOM05D002168 ORTHO05D002277 5.9e-49 198.7 287 44.3
arahy.Tifrunner.gnm1.ann1.SUJ4K6 Arachis hypogaea HOM05D002168 ORTHO05D002277 1.7e-48 197.2 290 44.8
FAN09G1917 Fragaria x ananassa HOM05D002168 ORTHO05D002277 2.2e-48 196.8 287 46.0
HanXRQChr17g0548341 Helianthus annuus HOM05D002168 ORTHO05D002277 5.0e-48 195.7 287 47.4
Lj2g0027560 Lotus japonicus HOM05D002168 ORTHO05D002277 1.6e-46 190.7 289 43.9
CANSAT64G2333 Cannabis sativa HOM05D002168 ORTHO05D002277 7.9e-46 188.3 295 42.0
Psat1g190960 Pisum sativum HOM05D002168 ORTHO05D002277 1.8e-45 187.2 295 43.4
Glyma.05G005200 Glycine max HOM05D002168 ORTHO05D002277 2.3e-45 186.8 294 43.9
Cc07_g01920 Coffea canephora HOM05D002168 ORTHO05D002277 3.9e-45 186.0 284 45.4
ECA246G5031 Erigeron canadensis HOM05D000575 ORTHO05D002277 8.8e-45 184.9 284 43.3
Phvul.004G011100 Phaseolus vulgaris HOM05D002168 ORTHO05D002277 1.1e-44 184.5 291 44.0
Lj7C738T14 Lonicera japonica HOM05D002168 ORTHO05D002277 1.5e-44 184.1 295 43.1
arahy.Tifrunner.gnm1.ann1.P30KPE Arachis hypogaea HOM05D002168 ORTHO05D002277 4.4e-44 182.6 277 43.7
PGR083G0169 Punica granatum HOM05D002168 ORTHO05D002277 4.4e-44 182.6 286 42.7
Nn4g22702 Nelumbo nucifera HOM05D002168 ORTHO05D002277 5.7e-44 182.2 290 44.1
TPR.G33737 Trifolium pratense HOM05D002168 ORTHO05D002277 1.7e-43 180.6 294 43.9
Glyma.19G005800 Glycine max HOM05D002168 ORTHO05D002277 2.8e-43 179.9 288 42.4
Aqoxy3G02862 Aquilegia oxysepala HOM05D002168 ORTHO05D002277 4.8e-43 179.1 328 40.9
Sc16g0003290 Simmondsia chinensis HOM05D002168 ORTHO05D002277 6.3e-43 178.7 286 41.6
Eucgr.J02224 Eucalyptus grandis HOM05D002168 ORTHO05D002277 1.1e-42 177.9 286 42.7
Medtr6g005460 Medicago truncatula HOM05D002168 ORTHO05D002277 9.1e-42 174.9 295 43.4
Lalb_Chr06g0175871 Lupinus albus HOM05D002168 ORTHO05D002277 2.0e-41 173.7 292 40.1
PSO063G7027 Papaver somniferum HOM05D002168 ORTHO05D002277 3.8e-40 169.5 351 36.2
PSO832G0633 Papaver somniferum HOM05D002168 ORTHO05D002277 5.0e-40 169.1 351 35.9
VMungo0464G1155 Vigna mungo HOM05D002168 ORTHO05D002277 6.5e-40 168.7 286 42.7
MSTRG.24029 Avicennia marina HOM05D002168 ORTHO05D002277 8.5e-40 168.3 282 37.9
ClCG10G014020 Citrullus lanatus HOM05D002168 ORTHO05D002277 7.9e-38 161.8 287 39.4
Cpa.g.sc108.35 Carica papaya HOM05D002168 ORTHO05D002277 3.9e-37 159.5 178 49.4
Sed0013184 Sechium edule HOM05D002168 ORTHO05D002277 2.0e-36 157.1 288 40.3
HPP92_011646 Vanilla planifolia HOM05D002168 ORTHO05D002277 7.4e-36 155.2 288 39.6
Oeu054614.1 Olea europaea HOM05D002168 ORTHO05D002277 9.7e-36 154.8 284 38.7
EL10Ac8g19521 Beta vulgaris HOM05D002168 ORTHO05D002277 1.3e-35 154.5 286 38.8
AUR62041598 Chenopodium quinoa HOM05D002168 ORTHO05D002277 2.2e-35 153.7 285 41.1
BolC3t13271H Brassica oleracea HOM05D002168 ORTHO05D002277 1.8e-34 150.6 286 34.6
Os02g0617700 Oryza sativa ssp. japonica HOM05D002168 ORTHO05D002277 4.1e-34 149.4 289 38.1
SGA_v2.0_scaffold135G34895 Striga asiatica HOM05D002168 ORTHO05D002277 7.0e-34 148.7 284 37.0
CDE05G1403 Ceratophyllum demersum HOM05D002168 ORTHO05D002277 1.6e-33 147.5 290 38.3
Thhalv10012572m.g Eutrema salsugineum HOM05D002168 ORTHO05D002277 1.7e-32 144.1 295 33.9
C09p62520 Brassica napus HOM05D002168 ORTHO05D002277 1.5e-31 141.0 289 33.2
C03p07710 Brassica napus HOM05D002168 ORTHO05D002277 1.9e-31 140.6 286 34.3
Migut.H00092 Erythranthe guttata HOM05D002168 ORTHO05D002277 3.2e-31 139.8 283 34.6
Zm00001eb247190 Zea mays HOM05D002168 ORTHO05D002277 4.2e-31 139.4 284 36.6
BolC9t59092H Brassica oleracea HOM05D002168 ORTHO05D002277 5.5e-31 139.0 289 32.5
BraA03t10002Z Brassica rapa HOM05D002168 ORTHO05D002277 2.7e-30 136.7 286 34.3
Lsat_1_v5_gn_0_19560 Lactuca sativa HOM05D002168 ORTHO05D002277 3.6e-30 136.3 275 40.0
CDE05G1995 Ceratophyllum demersum HOM05D002168 ORTHO05D002277 1.8e-29 134.0 297 37.4
A10p24050 Brassica napus HOM05D002168 ORTHO05D002277 4.0e-29 132.9 291 33.3
BraA10t44468Z Brassica rapa HOM05D002168 ORTHO05D002277 4.0e-29 132.9 291 33.3
Oeu057049.2 Olea europaea HOM05D033007 ORTHO05D002277 6.7e-29 132.1 272 35.7
Sp6g29450 Schrenkiella parvula HOM05D002168 ORTHO05D002277 6.7e-29 132.1 304 34.5
TAR629G1390 Trochodendron aralioides HOM05D002168 ORTHO05D002277 6.7e-29 132.1 144 54.9
AL6G25340 Arabidopsis lyrata HOM05D002168 ORTHO05D002277 1.2e-28 131.3 292 32.5
A03p06680 Brassica napus HOM05D002168 ORTHO05D002277 1.2e-28 131.3 286 33.2
SalBow1G8403 Salvia bowleyana HOM05D002168 ORTHO05D002277 9.7e-28 128.3 283 32.5
CsaV3_3G042650 Cucumis sativus L. HOM05D002168 ORTHO05D002277 1.7e-27 127.5 318 31.4
AT5G14580 Arabidopsis thaliana HOM05D002168 ORTHO05D002277 1.8e-26 124.0 299 32.8
CARHR198740 Cardamine hirsuta HOM05D002168 ORTHO05D002277 3.1e-26 123.2 289 32.9
COL.COLO4_29057 Corchorus olitorius HOM05D002168 ORTHO05D002277 3.5e-25 119.8 233 39.1
MELO3C009975.2 Cucumis melo HOM05D002168 ORTHO05D002277 3.5e-25 119.8 317 32.2
Carub.0006s1275 Capsella rubella HOM05D002168 ORTHO05D002277 6.5e-24 115.5 298 33.2
Atru.chr6.2257 Acer truncatum HOM05D002168 ORTHO05D002277 8.0e-22 108.6 74 73.0
AUR62033083 Chenopodium quinoa HOM05D002168 ORTHO05D002277 1.0e-21 108.2 254 35.0
Aa31LG11G15340 Aethionema arabicum HOM05D001485 ORTHO05D002277 2.0e-20 104.0 285 29.8
BcaB01g05105 Brassica carinata HOM05D002168 ORTHO05D002277 1.3e-19 101.3 83 54.2
unitig_52.g17662 Utricularia gibba HOM05D002168 ORTHO05D002277 4.8e-19 99.4 283 29.7
SEGI_03272 Sequoiadendron giganteum HOM05D002168 ORTHO05D002277 5.9e-17 92.4 395 26.6
ATR0078G007 Amborella trichopoda HOM05D002168 ORTHO05D002277 1.7e-16 90.9 269 33.1
SHI24542 Sapria himalayana HOM05D002168 ORTHO05D002277 2.8e-11 73.6 251 30.7
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 1.0e-08 65.1 73 45.2
CiPaw.03G041500 Carya illinoinensis HOM05D002168 ORTHO05D002277 2.8e-06 57.0 40 62.5
AagrBONN_evm.TU.Sc2ySwM_344.2242__2243 Anthoceros agrestis HOM05D002168 ORTHO05D002277 3.6e-06 56.6 39 61.5


User provided reference genes

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