Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009554 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D000634 9.6e-65 250.0 124 100.0
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 4.6e-59 231.1 123 91.9
Peaxi162Scf00379g00084 Petunia axillaris HOM05D000216 ORTHO05D000634 6.0e-59 230.7 123 91.9
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.3e-58 228.8 123 91.1
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.3e-58 228.8 123 91.1
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.3e-58 228.8 123 91.1
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.3e-58 228.8 123 91.1
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 2.3e-58 228.8 123 91.1
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 1.1e-57 226.5 123 89.4
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 2.5e-57 225.3 122 91.0
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 3.3e-57 224.9 122 90.2
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 7.4e-57 223.8 120 91.7
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 7.4e-57 223.8 125 91.2
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.6e-56 222.6 123 91.1
Nn092s42879 Nelumbo nucifera HOM05D000216 ORTHO05D000634 8.2e-56 220.3 123 87.8
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 4.1e-55 218.0 122 86.1
Gohir.A05G086066 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.2e-54 216.5 121 88.4
QL93p0837_0001 Quercus lobata HOM05D000216 ORTHO05D000634 3.8e-53 211.5 120 87.5
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.5e-53 210.7 122 86.1
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.5e-53 210.7 122 86.1
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.5e-53 210.7 122 86.1
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.5e-53 210.7 122 86.1
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.5e-53 210.7 122 86.1
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.5e-53 210.7 122 86.1
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 8.4e-53 210.3 116 90.5
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 1.4e-52 209.5 122 83.6
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 4.2e-52 208.0 122 86.1
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 4.2e-52 208.0 122 86.1
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 4.2e-52 208.0 121 85.1
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 7.2e-52 207.2 124 85.5
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.2e-51 206.5 122 85.2
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.6e-51 206.1 122 86.1
Gorai.008G102500 Gossypium raimondii HOM05D000216 ORTHO05D000634 4.6e-51 204.5 122 83.6
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 4.6e-51 204.5 122 83.6
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 3.3e-49 198.4 127 80.3
Lsat_1_v5_gn_1_6760 Lactuca sativa HOM05D003214 ORTHO05D004330 6.3e-48 194.1 124 80.6
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 4.1e-47 191.4 115 80.0
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 6.9e-47 190.7 117 82.1
Gorai.013G017900 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.7e-45 186.0 123 78.9
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 2.9e-45 185.3 119 82.4
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 2.5e-44 182.2 105 86.7
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 2.1e-43 179.1 119 79.8
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 2.1e-43 179.1 119 79.8
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 4.6e-43 177.9 100 89.0
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 1.0e-42 176.8 102 87.3
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 6.7e-42 174.1 93 92.5
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 8.8e-42 173.7 109 83.5
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 2.0e-41 172.6 124 74.2
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 2.0e-41 172.6 124 74.2
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 2.0e-41 172.6 124 74.2
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 2.0e-41 172.6 124 74.2
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 4.3e-41 171.4 112 80.4
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 4.3e-41 171.4 112 80.4
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 4.3e-41 171.4 112 80.4
Sc07g0006590 Simmondsia chinensis HOM05D000216 ORTHO05D000634 9.7e-41 170.2 94 91.5
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 6.3e-40 167.5 107 77.6
CAN.G939.12 Capsicum annuum HOM05D000216 ORTHO05D000634 6.3e-40 167.5 92 91.3
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 8.2e-40 167.2 122 73.0
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.9e-39 164.1 87 93.1
AUR62030170 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.3e-37 159.8 95 86.3
PGSC0003DMG400020297 Solanum tuberosum HOM05D000216 ORTHO05D000634 1.3e-37 159.8 97 83.5
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 3.8e-37 158.3 106 79.2
MELO3C001268.2 Cucumis melo HOM05D000216 ORTHO05D000634 6.5e-37 157.5 87 90.8
MELO3C028015.2 Cucumis melo HOM05D000216 ORTHO05D000634 6.5e-37 157.5 87 90.8
Gohir.D12G094332 Gossypium hirsutum HOM05D000216 ORTHO05D000634 7.2e-36 154.1 122 68.0
MELO3C028016.2 Cucumis melo HOM05D000216 ORTHO05D000634 9.4e-36 153.7 88 87.5
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.7e-35 151.4 91 84.6
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.7e-35 151.4 91 84.6
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.7e-35 151.4 91 84.6
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 8.8e-34 147.1 91 84.6
Nitab4.5_0016036g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.6e-33 145.6 120 66.7
HanXRQChr10g0282521 Helianthus annuus HOM05D000216 ORTHO05D000634 9.7e-33 143.7 86 86.0
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 3.7e-32 141.7 91 81.3
Nn3g18459 Nelumbo nucifera HOM05D000216 ORTHO05D000634 8.2e-32 140.6 73 95.9
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.2e-32 140.6 122 62.3
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 1.4e-31 139.8 91 80.2
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.1e-31 138.7 75 93.3
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 4.1e-31 138.3 77 89.6
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.1e-31 138.3 73 95.9
Gorai.011G135800 Gossypium raimondii HOM05D000216 ORTHO05D000634 5.3e-31 137.9 83 78.3
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 5.3e-31 137.9 90 80.0
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 1.2e-30 136.7 95 77.9
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 3.5e-30 135.2 84 82.1
RhsimPtG0004600 Rhododendron simsii HOM05D000743 ORTHO05D000580 7.7e-30 134.0 96 75.0
HPP92_021700 Vanilla planifolia HOM05D000216 ORTHO05D000634 7.7e-30 134.0 99 69.7
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 1.0e-29 133.7 87 86.2
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 1.7e-29 132.9 68 100.0
HPP92_007917 Vanilla planifolia HOM05D000216 ORTHO05D000634 2.2e-29 132.5 73 89.0
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 4.2e-28 128.3 77 85.7
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 7.2e-28 127.5 68 97.1
HanXRQChr11g0322741 Helianthus annuus HOM05D000216 ORTHO05D000634 9.4e-28 127.1 73 86.3
SGA_v2.0_scaffold61G21222 Striga asiatica HOM05D000540 ORTHO05D000681 2.1e-27 125.9 84 77.4
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.4e-26 123.2 66 95.5
MELO3C032363.2 Cucumis melo HOM05D000216 ORTHO05D000634 5.2e-26 121.3 69 87.0
Pp3c7_4990 Physcomitrium patens HOM05D000216 ORTHO05D000634 1.5e-25 119.8 106 59.4
HanXRQChr00c0125g0571741 Helianthus annuus HOM05D000216 ORTHO05D000634 2.0e-25 119.4 64 93.8
HanXRQChr00c0313g0573461 Helianthus annuus HOM05D000216 ORTHO05D000634 2.0e-25 119.4 64 93.8
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 2.0e-25 119.4 64 93.8
HanXRQChr07g0188311 Helianthus annuus HOM05D000216 ORTHO05D000634 2.0e-25 119.4 64 93.8
Hma1.2p1_3151F.1_g333240 Hydrangea macrophylla HOM05D000175 ORTHO05D000481 3.3e-25 118.6 63 96.8
Gohir.A09G103316 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.7e-25 117.9 62 96.8
AUR62021208 Chenopodium quinoa HOM05D000216 ORTHO05D000634 2.8e-24 115.5 63 95.2
CAN.G219.16 Capsicum annuum HOM05D000743 ORTHO05D000580 4.8e-24 114.8 64 92.2
Lsat_1_v5_gn_3_118020 Lactuca sativa HOM05D000216 ORTHO05D000634 6.3e-24 114.4 68 86.8
QL08p049862 Quercus lobata HOM05D000216 ORTHO05D000634 6.3e-24 114.4 59 98.3
HanXRQChr15g0470971 Helianthus annuus HOM05D000216 ORTHO05D000634 1.1e-23 113.6 64 92.2
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 1.8e-23 112.8 61 93.4
Gohir.D10G123250 Gossypium hirsutum HOM05D000216 ORTHO05D000634 4.1e-23 111.7 81 66.7
Sc11g0005800 Simmondsia chinensis HOM05D000216 ORTHO05D000634 7.0e-23 110.9 61 93.4
HanXRQChr14g0454991 Helianthus annuus HOM05D000216 ORTHO05D000634 9.1e-23 110.5 64 85.9
CAN.G100.42 Capsicum annuum HOM05D000216 ORTHO05D000634 1.6e-22 109.8 64 87.5
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 1.0e-21 107.1 62 82.3
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 1.3e-21 106.7 63 85.7
Solyc08g028900.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-20 103.6 64 85.9
Oeu023333.1 Olea europaea HOM05D000216 ORTHO05D000634 3.2e-20 102.1 123 50.4
Lalb_Chr07g0192701 Lupinus albus HOM05D000216 ORTHO05D000634 5.5e-20 101.3 79 73.4
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 5.5e-20 101.3 53 94.3
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 3.6e-19 98.6 54 88.9
Lsat_1_v5_gn_4_163961 Lactuca sativa HOM05D000216 ORTHO05D003518 6.1e-19 97.8 60 80.0
SEGI_39307 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 8.0e-19 97.4 79 64.6
HanXRQChr09g0238301 Helianthus annuus HOM05D000216 ORTHO05D000634 1.4e-18 96.7 52 92.3
SEGI_01684 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.4e-18 96.7 61 77.0
SEGI_05928 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 3.0e-18 95.5 52 88.5
SEGI_17366 Sequoiadendron giganteum HOM05D000216 ORTHO05D004227 3.0e-18 95.5 52 88.5
SEGI_21477 Sequoiadendron giganteum HOM05D000216 ORTHO05D004227 3.0e-18 95.5 52 88.5
SEGI_22758 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 3.0e-18 95.5 52 88.5
SEGI_02904 Sequoiadendron giganteum HOM05D000743 ORTHO05D000580 6.8e-18 94.4 61 75.4
SEGI_24942 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 8.8e-18 94.0 52 86.5
SEGI_00070 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 1.5e-17 93.2 51 88.2
SEGI_07796 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 1.5e-17 93.2 51 88.2
SEGI_22490 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 1.5e-17 93.2 51 88.2
SEGI_38828 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 1.5e-17 93.2 51 88.2
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.0e-17 92.8 51 86.3
MD09G1229200 Malus domestica HOM05D000216 ORTHO05D003518 3.4e-17 92.0 52 88.5
SEGI_21589 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 4.4e-17 91.7 53 84.9
SEGI_01764 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 3.7e-16 88.6 59 74.6
CARHR056710 Cardamine hirsuta HOM05D000216 ORTHO05D000634 4.1e-15 85.1 57 78.9
SEGI_13806 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 2.0e-14 82.8 51 78.4
HanXRQChr12g0386361 Helianthus annuus HOM05D000216 ORTHO05D000634 1.0e-13 80.5 45 91.1
HanXRQChr12g0386351 Helianthus annuus HOM05D000216 ORTHO05D000634 1.7e-13 79.7 45 88.9
Lj2C1237G0 Lonicera japonica HOM05D000216 ORTHO05D003638 2.9e-13 79.0 42 97.6
SEGI_23567 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 1.1e-12 77.0 50 74.0
CAN.G1542.7 Capsicum annuum HOM05D000216 ORTHO05D000634 1.5e-12 76.6 63 66.7
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 3.2e-12 75.5 40 92.5
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 3.2e-12 75.5 76 53.9
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.2e-12 75.5 40 90.0
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.2e-12 75.5 40 90.0
SEGI_35543 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 3.2e-12 75.5 40 90.0
HanXRQChr12g0386341 Helianthus annuus HOM05D000216 ORTHO05D000634 4.2e-12 75.1 45 84.4
Nitab4.5_0001761g0220 Nicotiana tabacum HOM05D000216 ORTHO05D000634 9.4e-12 73.9 43 86.0
SEGI_03649 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 1.2e-11 73.6 40 85.0
Nitab4.5_0016007g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.0e-10 70.5 85 51.8
Migut.D01340 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.8e-08 62.4 32 93.8
Nitab4.5_0000373g0230 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.8e-08 62.4 36 86.1
ClCG01G011270 Citrullus lanatus HOM05D000216 ORTHO05D000634 1.4e-07 60.1 40 67.5
Oeu028758.1 Olea europaea HOM05D000216 ORTHO05D000634 1.6e-06 56.6 30 83.3
vmacro20497 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 5.9e-06 54.7 71 39.4


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