Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G0749 Ceratophyllum demersum HOM05D004370 ORTHO05D005084 1.7e-134 483.0 316 100.0
CDE10G0801 Ceratophyllum demersum HOM05D004370 ORTHO05D005084 3.5e-103 379.0 284 94.7
TAR633G2348 Trochodendron aralioides HOM05D004370 ORTHO05D005084 1.9e-80 303.5 274 73.7
Aqoxy1G00534 Aquilegia oxysepala HOM05D004370 ORTHO05D005084 1.2e-79 300.8 210 81.0
MBI05_g12101_MAGBIO Magnolia biondii HOM05D004370 ORTHO05D005084 1.5e-77 293.9 188 80.3
ClCG01G025430 Citrullus lanatus HOM05D004370 ORTHO05D005084 2.1e-76 290.0 281 70.8
Dinv04119 Davidia involucrata HOM05D004370 ORTHO05D005084 3.6e-76 289.3 155 92.3
MELO3C007041.2 Cucumis melo HOM05D004370 ORTHO05D005084 1.4e-75 287.3 281 69.8
Nn1g09322 Nelumbo nucifera HOM05D004370 ORTHO05D005084 3.1e-75 286.2 155 91.0
Cpa.g.sc285.3 Carica papaya HOM05D004370 ORTHO05D005084 1.5e-74 283.9 284 69.4
MD06G1169400 Malus domestica HOM05D004370 ORTHO05D005084 1.5e-74 283.9 191 77.5
CsaV3_6G052680 Cucumis sativus L. HOM05D004370 ORTHO05D005084 4.5e-74 282.3 278 69.8
Lj5C81T13 Lonicera japonica HOM05D004370 ORTHO05D005084 3.8e-73 279.3 151 90.7
Duzib160G0857 Durio zibethinus HOM05D004370 ORTHO05D005084 1.4e-72 277.3 219 70.8
ECA238G0265 Erigeron canadensis HOM05D004370 ORTHO05D005084 3.2e-72 276.2 185 81.1
Hma1.2p1_0892F.1_g233360 Hydrangea macrophylla HOM05D004370 ORTHO05D005084 3.2e-72 276.2 258 76.0
Ciclev10018122m.g Citrus clementina HOM05D004370 ORTHO05D005084 4.2e-72 275.8 222 73.9
Lsat_1_v5_gn_2_112821 Lactuca sativa HOM05D004370 ORTHO05D005084 4.2e-72 275.8 153 90.8
Lsat_1_v5_gn_8_20501 Lactuca sativa HOM05D004370 ORTHO05D005084 5.4e-72 275.4 153 90.2
Sed0020090 Sechium edule HOM05D004370 ORTHO05D005084 5.4e-72 275.4 184 78.8
Lalb_Chr10g0106891 Lupinus albus HOM05D004370 ORTHO05D005084 9.3e-72 274.6 189 78.3
Lj9P663T35 Lonicera japonica HOM05D004370 ORTHO05D005084 1.2e-71 274.2 151 90.1
Manes.06G060100 Manihot esculenta HOM05D004370 ORTHO05D005084 1.2e-71 274.2 192 78.1
arahy.Tifrunner.gnm1.ann1.B8WTIA Arachis hypogaea HOM05D004370 ORTHO05D005084 2.1e-71 273.5 183 79.2
arahy.Tifrunner.gnm1.ann1.TBHV4Q Arachis hypogaea HOM05D004370 ORTHO05D005084 2.1e-71 273.5 183 79.2
CARHR227270 Cardamine hirsuta HOM05D004370 ORTHO05D005084 2.7e-71 273.1 189 78.3
HanXRQChr08g0218671 Helianthus annuus HOM05D004370 ORTHO05D005084 2.7e-71 273.1 180 81.7
HanXRQChr10g0304281 Helianthus annuus HOM05D004370 ORTHO05D005084 2.7e-71 273.1 180 81.7
Medtr5g092010 Medicago truncatula HOM05D004370 ORTHO05D005084 2.7e-71 273.1 210 70.5
Ca_06302_v3 Cicer arietinum L. HOM05D004370 ORTHO05D005084 3.5e-71 272.7 199 73.9
Gohir.D10G005600 Gossypium hirsutum HOM05D004370 ORTHO05D005084 3.5e-71 272.7 288 64.2
Oeu031694.1 Olea europaea HOM05D004370 ORTHO05D005084 6.0e-71 271.9 281 64.8
THA.LOC104806243 Tarenaya hassleriana HOM05D004370 ORTHO05D005084 6.0e-71 271.9 189 84.1
CSS0027232 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 1.0e-70 271.2 157 86.0
Gohir.A10G005600 Gossypium hirsutum HOM05D004370 ORTHO05D005084 1.0e-70 271.2 290 63.4
Potri.001G440100 Populus trichocarpa HOM05D004370 ORTHO05D005084 1.0e-70 271.2 285 71.6
Manes.14G127000 Manihot esculenta HOM05D004370 ORTHO05D005084 1.8e-70 270.4 152 88.8
PGR142G3562 Punica granatum HOM05D004370 ORTHO05D005084 1.8e-70 270.4 152 88.8
Actinidia35547 Actinidia chinensis HOM05D004370 ORTHO05D005084 2.3e-70 270.0 242 65.3
Psat2g015400 Pisum sativum HOM05D004370 ORTHO05D005084 3.0e-70 269.6 191 73.8
CANSAT25G2913 Cannabis sativa HOM05D004370 ORTHO05D005084 3.9e-70 269.2 156 85.9
Gorai.011G006200 Gossypium raimondii HOM05D004370 ORTHO05D005084 3.9e-70 269.2 288 63.9
Atru.chr10.664 Acer truncatum HOM05D004370 ORTHO05D005084 8.7e-70 268.1 153 88.2
Hma1.2p1_0258F.1_g104020 Hydrangea macrophylla HOM05D004370 ORTHO05D005084 8.7e-70 268.1 273 71.4
Prupe.5G168200 Prunus persica HOM05D004370 ORTHO05D005084 8.7e-70 268.1 205 71.7
A08p14890 Brassica napus HOM05D004370 ORTHO05D005084 1.1e-69 267.7 190 76.3
Sopen01g038350 Solanum pennellii HOM05D004370 ORTHO05D005084 1.1e-69 267.7 195 74.9
Aa31LG6G2820 Aethionema arabicum HOM05D004370 ORTHO05D005084 1.5e-69 267.3 151 87.4
Aa31LG9G8700 Aethionema arabicum HOM05D004370 ORTHO05D005084 1.9e-69 266.9 151 87.4
BolC3t20578H Brassica oleracea HOM05D004370 ORTHO05D005084 1.9e-69 266.9 192 76.0
Potri.011G155700 Populus trichocarpa HOM05D004370 ORTHO05D005084 1.9e-69 266.9 286 71.0
AT4G20440 Arabidopsis thaliana HOM05D004370 ORTHO05D005084 2.5e-69 266.5 151 88.1
MD14G1174700 Malus domestica HOM05D004370 ORTHO05D005084 2.5e-69 266.5 156 85.3
Sp7g18800 Schrenkiella parvula HOM05D004370 ORTHO05D005084 2.5e-69 266.5 151 88.1
Solyc01g094540.4 Solanum lycopersicum HOM05D004370 ORTHO05D005084 2.5e-69 266.5 195 74.4
LjContig00310g0017486 Lotus japonicus HOM05D004370 ORTHO05D005084 3.3e-69 266.2 180 77.2
Sed0027177 Sechium edule HOM05D004370 ORTHO05D005084 4.3e-69 265.8 152 87.5
Sc10g0006890 Simmondsia chinensis HOM05D004370 ORTHO05D005084 4.3e-69 265.8 183 78.1
BcaC09g51319 Brassica carinata HOM05D004370 ORTHO05D005084 5.6e-69 265.4 152 87.5
C01p14450 Brassica napus HOM05D004370 ORTHO05D005084 5.6e-69 265.4 152 87.5
BolC1t01401H Brassica oleracea HOM05D004370 ORTHO05D005084 5.6e-69 265.4 152 87.5
Phvul.008G264900 Phaseolus vulgaris HOM05D004370 ORTHO05D005084 5.6e-69 265.4 192 75.0
BcaNung05680 Brassica carinata HOM05D004370 ORTHO05D005084 9.6e-69 264.6 186 76.9
Thhalv10026002m.g Eutrema salsugineum HOM05D004370 ORTHO05D005084 9.6e-69 264.6 150 88.0
AL7G33430 Arabidopsis lyrata HOM05D004370 ORTHO05D005084 1.3e-68 264.2 183 80.3
AT5G44500 Arabidopsis thaliana HOM05D004370 ORTHO05D005084 1.3e-68 264.2 191 74.9
A01p12130 Brassica napus HOM05D004370 ORTHO05D005084 1.3e-68 264.2 152 86.8
BraA01t01156Z Brassica rapa HOM05D004370 ORTHO05D005084 1.3e-68 264.2 152 86.8
Glyma.14G025900 Glycine max HOM05D004370 ORTHO05D005084 1.3e-68 264.2 153 87.6
Prupe.6G342400 Prunus persica HOM05D004370 ORTHO05D005084 1.3e-68 264.2 150 86.7
PGSC0003DMG400000167 Solanum tuberosum HOM05D004370 ORTHO05D005084 1.3e-68 264.2 156 85.3
BcaC01g00671 Brassica carinata HOM05D004370 ORTHO05D005084 2.1e-68 263.5 152 86.8
C03p82950 Brassica napus HOM05D004370 ORTHO05D005084 2.1e-68 263.5 152 86.8
BcaB03g11674 Brassica carinata HOM05D004370 ORTHO05D005084 2.8e-68 263.1 190 74.7
TPR.G12528 Trifolium pratense HOM05D004370 ORTHO05D005084 2.8e-68 263.1 179 75.4
BcaNung04159 Brassica carinata HOM05D004370 ORTHO05D005084 3.7e-68 262.7 193 74.6
Lalb_Chr04g0248641 Lupinus albus HOM05D004370 ORTHO05D005084 4.8e-68 262.3 151 87.4
SHI20646 Sapria himalayana HOM05D004370 ORTHO05D005084 4.8e-68 262.3 249 62.7
VMungo0647G0361 Vigna mungo HOM05D004370 ORTHO05D005084 8.1e-68 261.5 178 78.7
CAN.G78.61 Capsicum annuum HOM05D004370 ORTHO05D005084 1.4e-67 260.8 206 74.8
Cfa008716 Carpinus fangiana HOM05D004370 ORTHO05D005084 1.4e-67 260.8 216 78.2
Phvul.008G234900 Phaseolus vulgaris HOM05D004370 ORTHO05D005084 1.4e-67 260.8 192 74.5
CSS0048817 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 1.8e-67 260.4 157 83.4
Carub.0007s2072 Capsella rubella HOM05D004370 ORTHO05D005084 1.8e-67 260.4 185 78.9
AL8G15320 Arabidopsis lyrata HOM05D004370 ORTHO05D005084 2.4e-67 260.0 195 72.3
TWI15G0591 Tripterygium wilfordii HOM05D004370 ORTHO05D005084 3.1e-67 259.6 145 89.0
CiPaw.13G141500 Carya illinoinensis HOM05D004370 ORTHO05D005084 5.3e-67 258.8 188 73.9
Oeu043883.1 Olea europaea HOM05D004370 ORTHO05D005084 5.3e-67 258.8 199 75.4
Rhsim07G0192400 Rhododendron simsii HOM05D004370 ORTHO05D005084 5.3e-67 258.8 189 75.1
Rhsim07G0192600 Rhododendron simsii HOM05D004370 ORTHO05D005084 5.3e-67 258.8 189 75.1
BraA08t33472Z Brassica rapa HOM05D000106 ORTHO05D005084 6.9e-67 258.5 193 72.5
HPP92_018640 Vanilla planifolia HOM05D004370 ORTHO05D005084 1.2e-66 257.7 245 68.2
Glyma.02G288900 Glycine max HOM05D004370 ORTHO05D005084 1.5e-66 257.3 190 79.5
Solyc05g049950.3 Solanum lycopersicum HOM05D004370 ORTHO05D005084 2.0e-66 256.9 153 83.7
Sopen05g028310 Solanum pennellii HOM05D004370 ORTHO05D005084 2.0e-66 256.9 153 83.7
PGSC0003DMG400021647 Solanum tuberosum HOM05D004370 ORTHO05D005084 2.0e-66 256.9 153 83.7
Haze_11726 Corylus avellana HOM05D004370 ORTHO05D005084 2.6e-66 256.5 216 76.9
Carub.0008s0400 Capsella rubella HOM05D004370 ORTHO05D005084 4.5e-66 255.8 177 76.3
Migut.E01529 Erythranthe guttata HOM05D004370 ORTHO05D005084 2.2e-65 253.4 158 81.0
Medtr8g080090 Medicago truncatula HOM05D004370 ORTHO05D005084 2.9e-65 253.1 154 83.1
FAN04G0169 Fragaria x ananassa HOM05D004370 ORTHO05D005084 6.5e-65 251.9 203 69.0
FAN13G1169 Fragaria x ananassa HOM05D004370 ORTHO05D005084 6.5e-65 251.9 178 73.6
SalBow1G7578 Salvia bowleyana HOM05D004370 ORTHO05D005084 6.5e-65 251.9 150 84.0
Thhalv10001000m.g Eutrema salsugineum HOM05D004370 ORTHO05D005084 8.4e-65 251.5 152 84.9
FvH4_5g05920 Fragaria vesca HOM05D004370 ORTHO05D005084 1.9e-64 250.4 203 68.5
FAN08G0371 Fragaria x ananassa HOM05D004370 ORTHO05D005084 1.9e-64 250.4 272 58.1
FAN18G1507 Fragaria x ananassa HOM05D004370 ORTHO05D005084 1.9e-64 250.4 203 68.5
Ah.16g102810 Amaranthus hybridus HOM05D004370 ORTHO05D005084 3.2e-64 249.6 151 84.1
AUR62000301 Chenopodium quinoa HOM05D004370 ORTHO05D005084 7.1e-64 248.4 153 82.4
AUR62009174 Chenopodium quinoa HOM05D004370 ORTHO05D005084 7.1e-64 248.4 153 82.4
MSTRG.1661 Avicennia marina HOM05D004370 ORTHO05D005084 9.3e-64 248.1 181 73.5
DCAR_006631 Daucus carota HOM05D004370 ORTHO05D005084 9.3e-64 248.1 205 69.3
ATR0697G198 Amborella trichopoda HOM05D004370 ORTHO05D005084 1.6e-63 247.3 193 73.6
COL.COLO4_26893 Corchorus olitorius HOM05D004370 ORTHO05D005084 2.1e-63 246.9 179 73.7
RcHm_v2.0_Chr7g0192911 Rosa chinensis HOM05D004370 ORTHO05D005084 3.5e-63 246.1 152 81.6
Ah.10g036820 Amaranthus hybridus HOM05D004370 ORTHO05D005084 6.0e-63 245.4 153 81.0
QL06p021586 Quercus lobata HOM05D004370 ORTHO05D005084 7.9e-63 245.0 185 73.0
FAN13G1413 Fragaria x ananassa HOM05D004370 ORTHO05D005084 1.3e-62 244.2 174 72.4
Peaxi162Scf00020g00025 Petunia axillaris HOM05D004370 ORTHO05D005084 1.3e-62 244.2 140 87.1
RcHm_v2.0_Chr3g0451231 Rosa chinensis HOM05D004370 ORTHO05D005084 1.3e-62 244.2 156 79.5
SGA_v2.0_scaffold169G38655 Striga asiatica HOM05D004370 ORTHO05D005084 1.3e-62 244.2 150 81.3
THA.LOC104812077 Tarenaya hassleriana HOM05D004370 ORTHO05D005084 1.3e-62 244.2 151 82.8
Sabra16G0297300 Salix brachista HOM05D004370 ORTHO05D005084 1.8e-62 243.8 290 64.1
QL03p043504 Quercus lobata HOM05D004370 ORTHO05D005084 2.3e-62 243.4 216 69.4
Mapoly0023s0062 Marchantia polymorpha HOM05D004370 ORTHO05D005084 3.0e-62 243.0 155 79.4
SGA_v2.0_scaffold163G38072 Striga asiatica HOM05D004370 ORTHO05D005084 3.0e-62 243.0 150 81.3
Eucgr.L00005 Eucalyptus grandis HOM05D004370 ORTHO05D005084 6.7e-62 241.9 271 69.7
Thecc.06G007600 Theobroma cacao HOM05D004370 ORTHO05D005084 5.7e-61 238.8 149 83.2
Migut.A00202 Erythranthe guttata HOM05D004370 ORTHO05D005084 9.6e-61 238.0 143 82.5
Cc09_g05790 Coffea canephora HOM05D004370 ORTHO05D005084 2.4e-59 233.4 151 80.1
unitig_899.g14482 Utricularia gibba HOM05D004370 ORTHO05D005084 9.0e-59 231.5 141 83.0
Sabra11G0144100 Salix brachista HOM05D004370 ORTHO05D005084 1.0e-57 228.0 130 88.5
Zm00001eb117150 Zea mays HOM05D004370 ORTHO05D005084 1.4e-56 224.2 193 66.3
PSO339G5217 Papaver somniferum HOM05D004370 ORTHO05D005084 1.2e-55 221.1 272 61.4
PSO384G4426 Papaver somniferum HOM05D004370 ORTHO05D005084 1.2e-55 221.1 272 61.4
unitig_736.g22531 Utricularia gibba HOM05D004370 ORTHO05D005084 6.1e-55 218.8 135 81.5
CBR_g48393 Chara braunii HOM05D004370 ORTHO05D005084 8.7e-54 214.9 187 63.1
Lsat_1_v5_gn_8_16800 Lactuca sativa HOM05D004370 ORTHO05D005084 2.5e-53 213.4 122 88.5
C07p50900 Brassica napus HOM05D000106 ORTHO05D000160 1.1e-51 208.0 127 81.9
A03p52450 Brassica napus HOM05D004370 ORTHO05D005084 1.3e-49 201.1 159 69.8
SEGI_35791 Sequoiadendron giganteum HOM05D004370 ORTHO05D005084 1.3e-49 201.1 155 69.7
BcaNung05058 Brassica carinata HOM05D004370 ORTHO05D005084 8.5e-49 198.4 122 82.0
Cre14.g611150 Chlamydomonas reinhardtii HOM05D004370 ORTHO05D005084 2.5e-48 196.8 153 65.4
AUR62022051 Chenopodium quinoa HOM05D004370 ORTHO05D005084 5.5e-48 195.7 191 60.7
arahy.Tifrunner.gnm1.ann1.IZ2YN8 Arachis hypogaea HOM05D004370 ORTHO05D005084 3.7e-44 183.0 109 84.4
MCO12G128 Micromonas commoda HOM05D004370 ORTHO05D005084 8.2e-44 181.8 151 61.6
Zm00001eb300870 Zea mays HOM05D004370 ORTHO05D005084 1.2e-42 177.9 193 54.9
MD04G1223300 Malus domestica HOM05D004370 ORTHO05D005084 1.7e-41 174.1 123 69.9
Dinv23904 Davidia involucrata HOM05D004370 ORTHO05D005084 5.0e-41 172.6 199 53.3
arahy.Tifrunner.gnm1.ann1.1VG4JJ Arachis hypogaea HOM05D004370 ORTHO05D005084 2.4e-35 153.7 94 81.9
SMO367G1222 Selaginella moellendorffii HOM05D004370 ORTHO05D005084 1.5e-34 151.0 94 78.7
MD04G1002600 Malus domestica HOM05D004370 ORTHO05D005084 2.5e-32 143.7 102 73.5
Pp3c3_24910 Physcomitrium patens HOM05D004370 ORTHO05D005084 2.7e-31 140.2 153 53.6
Pp3c3_24850 Physcomitrium patens HOM05D004370 ORTHO05D005084 4.7e-31 139.4 189 48.1
Pp3c3_24900 Physcomitrium patens HOM05D004370 ORTHO05D005084 4.7e-31 139.4 189 48.1
Pp3c10_22940 Physcomitrium patens HOM05D004370 ORTHO05D005084 1.4e-30 137.9 186 48.9
PRCOL_00001809 Prasinoderma coloniale HOM05D004370 ORTHO05D005084 2.4e-27 127.1 137 54.0
AUR62009175 Chenopodium quinoa HOM05D004370 ORTHO05D005084 4.0e-22 109.8 139 49.6
Oeu011279.1 Olea europaea HOM05D004370 ORTHO05D005084 1.2e-18 98.2 53 86.8
BraA03t14323Z Brassica rapa HOM05D004370 ORTHO05D005084 1.4e-14 84.7 81 60.5
GSVIVG01034611001 Vitis vinifera HOM05D004370 ORTHO05D005084 8.8e-14 82.0 66 68.2
BcaNung05387 Brassica carinata HOM05D004370 ORTHO05D005084 1.5e-13 81.3 45 82.2
SEGI_08107 Sequoiadendron giganteum HOM05D004370 ORTHO05D005084 5.7e-13 79.3 50 80.0


User provided reference genes

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