Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g884 Chara braunii HOM05D006093 ORTHO05D007652 0.0e+00 1728.8 929 100.0
Os06g0643600 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 1.4e-72 278.9 304 46.1
CAN.G407.11 Capsicum annuum HOM05D006093 ORTHO05D007652 4.2e-72 277.3 262 50.4
Zm00001eb275260 Zea mays HOM05D006093 ORTHO05D007652 1.6e-71 275.4 306 45.1
Mapoly0015s0062 Marchantia polymorpha HOM05D006093 ORTHO05D007652 3.9e-70 270.8 218 56.9
Phvul.005G179300 Phaseolus vulgaris HOM05D006093 ORTHO05D007652 3.7e-68 264.2 255 49.4
TAR626G1009 Trochodendron aralioides HOM05D006093 ORTHO05D007652 3.7e-68 264.2 244 52.5
Sp1g39050 Schrenkiella parvula HOM05D006093 ORTHO05D007652 4.8e-68 263.8 246 51.2
Carub.0001s4146 Capsella rubella HOM05D006093 ORTHO05D007652 3.1e-67 261.2 246 52.0
A05p18970 Brassica napus HOM05D006093 ORTHO05D007652 9.1e-67 259.6 226 53.5
BraA05t20794Z Brassica rapa HOM05D006093 ORTHO05D007652 9.1e-67 259.6 226 53.5
Sed0013008 Sechium edule HOM05D006093 ORTHO05D007652 1.2e-66 259.2 224 53.6
BcaC08g43998 Brassica carinata HOM05D006093 ORTHO05D007652 1.6e-66 258.8 246 50.8
Duzib235G0399 Durio zibethinus HOM05D006093 ORTHO05D007652 1.6e-66 258.8 258 49.6
BolC6t36581H Brassica oleracea HOM05D006093 ORTHO05D007652 2.6e-66 258.1 246 50.8
PGSC0003DMG400014146 Solanum tuberosum HOM05D006093 ORTHO05D007652 3.5e-66 257.7 234 52.1
Pp3c23_21520 Physcomitrium patens HOM05D006093 ORTHO05D007652 4.5e-66 257.3 421 37.3
ATR0800G026 Amborella trichopoda HOM05D006093 ORTHO05D007652 5.9e-66 256.9 224 53.1
BcaB02g10988 Brassica carinata HOM05D006093 ORTHO05D007652 7.7e-66 256.5 226 53.1
COL.COLO4_11898 Corchorus olitorius HOM05D006093 ORTHO05D007652 7.7e-66 256.5 225 52.0
AT1G52500 Arabidopsis thaliana HOM05D006093 ORTHO05D007652 1.7e-65 255.4 246 50.8
CsaV3_4G001910 Cucumis sativus L. HOM05D006093 ORTHO05D007652 1.7e-65 255.4 224 52.7
RcHm_v2.0_Chr2g0134861 Rosa chinensis HOM05D006093 ORTHO05D007652 1.7e-65 255.4 257 47.9
Lalb_Chr24g0395421 Lupinus albus HOM05D006093 ORTHO05D007652 2.2e-65 255.0 257 48.2
Thhalv10011553m.g Eutrema salsugineum HOM05D006093 ORTHO05D007652 3.8e-65 254.2 246 50.8
TPR.G37262 Trifolium pratense HOM05D006093 ORTHO05D007652 5.0e-65 253.8 248 48.8
THA.LOC104818014 Tarenaya hassleriana HOM05D006093 ORTHO05D007652 6.5e-65 253.4 249 48.6
CiPaw.01G249800 Carya illinoinensis HOM05D006093 ORTHO05D007652 1.1e-64 252.7 222 50.5
Medtr2g104100 Medicago truncatula HOM05D006093 ORTHO05D007652 1.1e-64 252.7 256 46.9
Gohir.D10G082500 Gossypium hirsutum HOM05D006093 ORTHO05D007652 1.5e-64 252.3 239 49.8
Peaxi162Scf00553g00627 Petunia axillaris HOM05D006093 ORTHO05D007652 1.5e-64 252.3 287 44.9
MD17G1215000 Malus domestica HOM05D006093 ORTHO05D007652 2.5e-64 251.5 254 48.0
Migut.I00747 Erythranthe guttata HOM05D006093 ORTHO05D007652 4.2e-64 250.8 336 39.9
Solyc03g117510.4 Solanum lycopersicum HOM05D006093 ORTHO05D007652 4.2e-64 250.8 234 50.4
MBI15_g24195_MAGBIO Magnolia biondii HOM05D006093 ORTHO05D007652 7.2e-64 250.0 224 51.3
SalBow2G3638 Salvia bowleyana HOM05D006093 ORTHO05D007652 7.2e-64 250.0 357 40.9
Ca_01048_v3 Cicer arietinum L. HOM05D006093 ORTHO05D007652 9.4e-64 249.6 296 43.2
FAN09G4542 Fragaria x ananassa HOM05D006093 ORTHO05D007652 9.4e-64 249.6 257 47.1
Lj3g0003829 Lotus japonicus HOM05D006093 ORTHO05D007652 9.4e-64 249.6 257 47.5
ECA247G0880 Erigeron canadensis HOM05D006093 ORTHO05D007652 1.2e-63 249.2 253 46.6
Eucgr.F03905 Eucalyptus grandis HOM05D006093 ORTHO05D007652 1.2e-63 249.2 226 50.9
Nn8g39568 Nelumbo nucifera HOM05D006093 ORTHO05D007652 1.2e-63 249.2 200 54.0
arahy.Tifrunner.gnm1.ann1.5T1ZSX Arachis hypogaea HOM05D006093 ORTHO05D007652 1.6e-63 248.8 230 50.9
arahy.Tifrunner.gnm1.ann1.RDN84X Arachis hypogaea HOM05D006093 ORTHO05D007652 1.6e-63 248.8 230 50.9
CDE05G1298 Ceratophyllum demersum HOM05D006093 ORTHO05D007652 2.1e-63 248.4 259 48.3
Gorai.011G089400 Gossypium raimondii HOM05D006093 ORTHO05D007652 2.1e-63 248.4 224 50.0
Nitab4.5_0010806g0010 Nicotiana tabacum HOM05D006093 ORTHO05D007652 2.1e-63 248.4 234 50.4
Ciclev10025737m.g Citrus clementina HOM05D006093 ORTHO05D007652 2.7e-63 248.1 256 47.7
FvH4_6g29401 Fragaria vesca HOM05D006093 ORTHO05D007652 2.7e-63 248.1 257 45.9
FAN14G2225 Fragaria x ananassa HOM05D006093 ORTHO05D007652 2.7e-63 248.1 257 45.9
Hma1.2p1_0017F.1_g011320 Hydrangea macrophylla HOM05D006093 ORTHO05D007652 3.6e-63 247.7 244 48.4
Rhsim12G0190000 Rhododendron simsii HOM05D006093 ORTHO05D007652 4.7e-63 247.3 308 40.6
Cc04_g04560 Coffea canephora HOM05D006093 ORTHO05D007652 8.0e-63 246.5 224 51.3
Glyma.13G366800 Glycine max HOM05D006093 ORTHO05D007652 1.4e-62 245.7 246 47.2
Thecc.06G031100 Theobroma cacao HOM05D006093 ORTHO05D007652 1.4e-62 245.7 224 50.4
CSS0022367 Camellia sinensis var. sinensis HOM05D006093 ORTHO05D007652 1.8e-62 245.4 250 46.8
Manes.04G110800 Manihot esculenta HOM05D006093 ORTHO05D007652 1.8e-62 245.4 231 48.5
Sopen03g036410 Solanum pennellii HOM05D006093 ORTHO05D007652 1.8e-62 245.4 234 49.6
Manes.11G058700 Manihot esculenta HOM05D006093 ORTHO05D007652 2.3e-62 245.0 246 48.0
Pp3c8_24280 Physcomitrium patens HOM05D006093 ORTHO05D007652 2.3e-62 245.0 223 50.2
PSO170G6797 Papaver somniferum HOM05D006093 ORTHO05D007652 5.2e-62 243.8 248 46.4
HPP92_003851 Vanilla planifolia HOM05D006093 ORTHO05D007652 5.2e-62 243.8 374 37.2
Atru.chr1.2881 Acer truncatum HOM05D006093 ORTHO05D007652 6.7e-62 243.4 246 46.7
Potri.003G031100 Populus trichocarpa HOM05D006093 ORTHO05D007652 6.7e-62 243.4 231 49.8
QL05p032033 Quercus lobata HOM05D006093 ORTHO05D007652 6.7e-62 243.4 224 47.3
Haze_16582 Corylus avellana HOM05D006093 ORTHO05D007652 1.2e-61 242.7 240 49.6
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 1.2e-61 242.7 254 46.5
MSTRG.11153 Avicennia marina HOM05D006093 ORTHO05D007652 2.0e-61 241.9 246 46.3
HanXRQChr02g0033451 Helianthus annuus HOM05D006093 ORTHO05D007652 2.0e-61 241.9 224 50.0
VMungo1080G1109 Vigna mungo HOM05D006093 ORTHO05D007652 2.0e-61 241.9 258 45.7
Aa31LG10G2500 Aethionema arabicum HOM05D006093 ORTHO05D007652 2.6e-61 241.5 269 46.8
CANSAT56G0666 Cannabis sativa HOM05D006093 ORTHO05D007652 2.6e-61 241.5 259 47.1
HanXRQChr02g0033461 Helianthus annuus HOM05D006093 ORTHO05D007652 5.7e-61 240.4 222 50.0
FAN05G1370 Fragaria x ananassa HOM05D006093 ORTHO05D007652 7.5e-61 240.0 265 45.7
GSVIVG01017379001 Vitis vinifera HOM05D006093 ORTHO05D007652 7.5e-61 240.0 191 54.5
AUR62016319 Chenopodium quinoa HOM05D006093 ORTHO05D007652 1.3e-60 239.2 224 49.6
SMO367G0330 Selaginella moellendorffii HOM05D006093 ORTHO05D007652 1.3e-60 239.2 212 50.5
TWI12G0620 Tripterygium wilfordii HOM05D006093 ORTHO05D007652 3.7e-60 237.7 197 51.8
Cpa.g.sc167.9 Carica papaya HOM05D006093 ORTHO05D007652 8.2e-60 236.5 211 51.2
AUR62011503 Chenopodium quinoa HOM05D006093 ORTHO05D007652 1.1e-59 236.1 224 49.1
Os08g0304900 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 1.8e-59 235.3 261 46.0
Lj5A75T43 Lonicera japonica HOM05D006093 ORTHO05D007652 2.4e-59 235.0 249 45.8
PGR102G2220 Punica granatum HOM05D006093 ORTHO05D007652 4.1e-59 234.2 227 48.9
EL10Ac9g21886 Beta vulgaris HOM05D006093 ORTHO05D007652 5.3e-59 233.8 224 49.6
HanXRQChr02g0033471 Helianthus annuus HOM05D006093 ORTHO05D007652 2.0e-58 231.9 258 45.7
Hund00502 Selenicereus undatus HOM05D006093 ORTHO05D007652 5.9e-58 230.3 195 53.3
Sabra03G0017500 Salix brachista HOM05D006093 ORTHO05D007652 7.7e-58 229.9 324 38.0
Ah.01g020480 Amaranthus hybridus HOM05D006093 ORTHO05D007652 1.0e-57 229.6 264 42.8
vmacro16879 Vaccinium macrocarpon HOM05D006093 ORTHO05D007652 3.8e-57 227.6 250 45.2
Gohir.A10G068900 Gossypium hirsutum HOM05D006093 ORTHO05D007652 1.1e-56 226.1 245 46.5
Cre10.g428433 Chlamydomonas reinhardtii HOM05D006093 ORTHO05D007652 1.9e-56 225.3 238 49.2
Sc10g0008130 Simmondsia chinensis HOM05D006093 ORTHO05D007652 2.1e-55 221.9 224 47.8
unitig_62.g23594 Utricularia gibba HOM05D006093 ORTHO05D007652 8.0e-55 219.9 305 38.4
ClCG07G012240 Citrullus lanatus HOM05D006093 ORTHO05D007652 1.4e-54 219.2 327 37.0
DCAR_025523 Daucus carota HOM05D006093 ORTHO05D007652 2.3e-54 218.4 195 48.7
MCO15G481 Micromonas commoda HOM05D006093 ORTHO05D007652 3.0e-54 218.0 210 49.0
Actinidia08791 Actinidia chinensis HOM05D006093 ORTHO05D007652 2.6e-53 214.9 239 44.8
MELO3C017842.2 Cucumis melo HOM05D006093 ORTHO05D007652 9.8e-53 213.0 254 42.5
Pp3c24_20180 Physcomitrium patens HOM05D006093 ORTHO05D007652 1.3e-52 212.6 359 37.3
Nitab4.5_0003072g0060 Nicotiana tabacum HOM05D006093 ORTHO05D007652 2.8e-52 211.5 197 49.2
Dinv30625 Davidia involucrata HOM05D006093 ORTHO05D007652 4.8e-52 210.7 224 44.2
Psat5g303120 Pisum sativum HOM05D006093 ORTHO05D007652 4.1e-51 207.6 298 38.6
Cfa001944 Carpinus fangiana HOM05D006093 ORTHO05D007652 2.7e-50 204.9 194 50.0
Lsat_1_v5_gn_1_34180 Lactuca sativa HOM05D006093 ORTHO05D007652 5.9e-50 203.8 259 39.0
Prupe.3G090700 Prunus persica HOM05D006093 ORTHO05D007652 8.6e-49 199.9 204 47.5
AL1G60740 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 1.1e-48 199.5 167 54.5
CARHR042600 Cardamine hirsuta HOM05D006093 ORTHO05D007652 4.2e-48 197.6 174 52.9
SGA_v2.0_scaffold5G02719 Striga asiatica HOM05D006093 ORTHO05D007652 4.9e-44 184.1 176 47.2
Cfa026683 Carpinus fangiana HOM05D006093 ORTHO05D007652 1.4e-43 182.6 284 37.7
PSO017G4202 Papaver somniferum HOM05D006093 ORTHO05D007652 8.6e-41 173.3 162 51.9
Psat6g066000 Pisum sativum HOM05D006093 ORTHO05D007652 2.0e-37 162.2 186 44.6
SHI11225 Sapria himalayana HOM05D006093 ORTHO05D007652 3.7e-36 157.9 256 34.8
Gohir.D10G074901 Gossypium hirsutum HOM05D006093 ORTHO05D007652 1.3e-25 122.9 119 50.4
AL7G45760 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 6.0e-18 97.4 101 44.6
Cfa001945 Carpinus fangiana HOM05D006093 ORTHO05D007652 1.8e-14 85.9 129 37.2
GSVIVG01026354001 Vitis vinifera HOM05D006093 ORTHO05D007652 2.7e-10 72.0 56 48.2
Eucgr.L03570 Eucalyptus grandis HOM05D006093 ORTHO05D007652 6.0e-10 70.9 58 46.6
CARHR042620 Cardamine hirsuta HOM05D006093 ORTHO05D007652 3.0e-09 68.6 80 47.5
PRCOL_00006677 Prasinoderma coloniale HOM05D016293 ORTHO05D018978 5.1e-09 67.8 175 31.4
SEGI_39009 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 6.6e-09 67.4 73 42.5
AL1G60750 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 7.3e-08 63.9 80 45.0
SEGI_24777 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 5.2e-06 57.8 48 43.8
Thecc.09G173900 Theobroma cacao HOM05D006093 ORTHO05D007652 5.2e-06 57.8 76 36.8


User provided reference genes

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