Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g74987 Chara braunii HOM05D002182 ORTHO05D004671 2.2e-78 295.4 135 100.0
Pp3c21_9710 Physcomitrium patens HOM05D002182 ORTHO05D004671 9.5e-42 173.7 105 73.3
SEGI_15758 Sequoiadendron giganteum HOM05D002182 ORTHO05D004671 1.4e-40 169.9 100 76.0
Mapoly0113s0011 Marchantia polymorpha HOM05D002182 ORTHO05D004671 2.0e-39 166.0 109 67.0
MBI07_g47060_MAGBIO Magnolia biondii HOM05D002182 ORTHO05D004671 1.7e-38 162.9 105 69.5
Eucgr.H05141 Eucalyptus grandis HOM05D002182 ORTHO05D004671 2.2e-38 162.5 105 69.5
BcaC03g18232 Brassica carinata HOM05D002182 ORTHO05D004671 3.8e-38 161.8 109 65.1
Carub.0008s2470 Capsella rubella HOM05D002182 ORTHO05D004671 3.8e-38 161.8 109 65.1
THA.LOC104818422 Tarenaya hassleriana HOM05D002182 ORTHO05D004671 3.8e-38 161.8 105 68.6
CANSAT01G2275 Cannabis sativa HOM05D002182 ORTHO05D004671 4.9e-38 161.4 102 71.6
FvH4_1g24710 Fragaria vesca HOM05D002182 ORTHO05D004671 4.9e-38 161.4 105 69.5
FAN19G2097 Fragaria x ananassa HOM05D002182 ORTHO05D004671 4.9e-38 161.4 105 69.5
FAN23G2071 Fragaria x ananassa HOM05D002182 ORTHO05D004671 4.9e-38 161.4 105 69.5
ATR1001G007 Amborella trichopoda HOM05D002182 ORTHO05D004671 6.4e-38 161.0 109 68.8
SMO114G0082 Selaginella moellendorffii HOM05D002182 ORTHO05D004671 1.1e-37 160.2 123 58.5
DCAR_023889 Daucus carota HOM05D002182 ORTHO05D004671 1.4e-37 159.8 102 71.6
GSVIVG01026461001 Vitis vinifera HOM05D002182 ORTHO05D004671 1.9e-37 159.5 106 67.9
CARHR277840 Cardamine hirsuta HOM05D002182 ORTHO05D004671 2.4e-37 159.1 109 62.4
FAN26G0537 Fragaria x ananassa HOM05D002182 ORTHO05D004671 2.4e-37 159.1 105 68.6
BcaB07g29709 Brassica carinata HOM05D002182 ORTHO05D004671 3.2e-37 158.7 109 64.2
A02p43050 Brassica napus HOM05D002182 ORTHO05D004671 3.2e-37 158.7 109 64.2
C02p63010 Brassica napus HOM05D002182 ORTHO05D004671 3.2e-37 158.7 109 64.2
BolC2t12375H Brassica oleracea HOM05D002182 ORTHO05D004671 3.2e-37 158.7 109 64.2
BraA02t09226Z Brassica rapa HOM05D002182 ORTHO05D004671 3.2e-37 158.7 109 64.2
Ca_16979_v3 Cicer arietinum L. HOM05D002182 ORTHO05D004671 4.1e-37 158.3 116 63.8
Prupe.4G275500 Prunus persica HOM05D002182 ORTHO05D004671 4.1e-37 158.3 105 68.6
RcHm_v2.0_Chr2g0122231 Rosa chinensis HOM05D002182 ORTHO05D004671 5.4e-37 157.9 105 67.6
Zm00001eb005010 Zea mays HOM05D002182 ORTHO05D004671 5.4e-37 157.9 105 66.7
Gohir.D11G061900 Gossypium hirsutum HOM05D002182 ORTHO05D004671 7.1e-37 157.5 116 62.1
Gorai.007G066700 Gossypium raimondii HOM05D002182 ORTHO05D004671 7.1e-37 157.5 116 62.1
AT5G63920 Arabidopsis thaliana HOM05D002182 ORTHO05D004671 9.2e-37 157.1 109 63.3
MELO3C009682.2 Cucumis melo HOM05D002182 ORTHO05D004671 9.2e-37 157.1 103 69.9
MD15G1134700 Malus domestica HOM05D002182 ORTHO05D004671 9.2e-37 157.1 105 68.6
vmacro12743 Vaccinium macrocarpon HOM05D002182 ORTHO05D004671 9.2e-37 157.1 100 70.0
Migut.H00803 Erythranthe guttata HOM05D002182 ORTHO05D004671 1.2e-36 156.8 105 65.7
Nitab4.5_0000120g0160 Nicotiana tabacum HOM05D002182 ORTHO05D004671 1.2e-36 156.8 105 67.6
Nitab4.5_0001277g0040 Nicotiana tabacum HOM05D002182 ORTHO05D004671 1.2e-36 156.8 105 67.6
Oeu050090.2 Olea europaea HOM05D002182 ORTHO05D004671 1.2e-36 156.8 109 65.1
Peaxi162Scf00151g00069 Petunia axillaris HOM05D002182 ORTHO05D004671 1.2e-36 156.8 103 68.0
PGR102G1182 Punica granatum HOM05D002182 ORTHO05D004671 1.2e-36 156.8 105 67.6
Dinv35485 Davidia involucrata HOM05D002182 ORTHO05D004671 1.6e-36 156.4 105 68.6
Thhalv10003618m.g Eutrema salsugineum HOM05D002182 ORTHO05D004671 1.6e-36 156.4 109 63.3
PSO443G0075 Papaver somniferum HOM05D002182 ORTHO05D004671 1.6e-36 156.4 103 68.9
Sc16g0009510 Simmondsia chinensis HOM05D002182 ORTHO05D004671 1.6e-36 156.4 123 61.0
Solyc05g014740.1 Solanum lycopersicum HOM05D002182 ORTHO05D004671 1.6e-36 156.4 105 67.6
Sopen05g009910 Solanum pennellii HOM05D002182 ORTHO05D004671 1.6e-36 156.4 105 67.6
AL8G41160 Arabidopsis lyrata HOM05D002182 ORTHO05D004671 2.1e-36 156.0 109 63.3
Lj4C830T7 Lonicera japonica HOM05D002182 ORTHO05D004671 2.1e-36 156.0 109 64.2
Os03g0165000 Oryza sativa ssp. japonica HOM05D002182 ORTHO05D004671 2.1e-36 156.0 105 64.8
Sp2g26990 Schrenkiella parvula HOM05D002182 ORTHO05D004671 2.1e-36 156.0 109 62.4
TAR376G0522 Trochodendron aralioides HOM05D002182 ORTHO05D004671 2.1e-36 156.0 105 66.7
CAN.G163.2 Capsicum annuum HOM05D002182 ORTHO05D004671 2.7e-36 155.6 105 67.6
Rhsim10G0124200 Rhododendron simsii HOM05D002182 ORTHO05D004671 2.7e-36 155.6 105 66.7
AagrBONN_evm.TU.Sc2ySwM_228.5819 Anthoceros agrestis HOM05D002182 ORTHO05D004671 3.5e-36 155.2 110 62.7
Actinidia20029 Actinidia chinensis HOM05D002182 ORTHO05D004671 4.6e-36 154.8 100 69.0
Duzib264G0915 Durio zibethinus HOM05D002182 ORTHO05D004671 6.0e-36 154.5 116 61.2
Lj1g0008046 Lotus japonicus HOM05D002182 ORTHO05D004671 6.0e-36 154.5 100 69.0
Nn5g28440 Nelumbo nucifera HOM05D002182 ORTHO05D004671 6.0e-36 154.5 116 61.2
Potri.005G067100 Populus trichocarpa HOM05D002182 ORTHO05D004671 6.0e-36 154.5 105 66.7
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 6.0e-36 154.5 130 55.4
arahy.Tifrunner.gnm1.ann1.K5KUZ3 Arachis hypogaea HOM05D002182 ORTHO05D004671 7.8e-36 154.1 116 59.5
arahy.Tifrunner.gnm1.ann1.XVSB6Y Arachis hypogaea HOM05D002182 ORTHO05D004671 7.8e-36 154.1 116 59.5
CsaV3_3G039390 Cucumis sativus L. HOM05D002182 ORTHO05D004671 7.8e-36 154.1 103 68.9
HanXRQChr01g0016921 Helianthus annuus HOM05D002182 ORTHO05D004671 7.8e-36 154.1 109 64.2
Sed0010212 Sechium edule HOM05D002182 ORTHO05D004671 7.8e-36 154.1 103 68.9
Medtr3g096640 Medicago truncatula HOM05D002182 ORTHO05D004671 1.0e-35 153.7 100 69.0
PSO384G2582 Papaver somniferum HOM05D002182 ORTHO05D004671 1.0e-35 153.7 103 68.0
Hund21801 Selenicereus undatus HOM05D002182 ORTHO05D004671 1.0e-35 153.7 109 62.4
TPR.G33581 Trifolium pratense HOM05D002182 ORTHO05D004671 1.0e-35 153.7 116 62.1
EL10Ac4g09621 Beta vulgaris HOM05D002182 ORTHO05D004671 1.7e-35 152.9 109 62.4
Cpa.g.sc37.4 Carica papaya HOM05D002182 ORTHO05D004671 1.7e-35 152.9 105 66.7
Lsat_1_v5_gn_1_78841 Lactuca sativa HOM05D002182 ORTHO05D004671 1.7e-35 152.9 109 63.3
AUR62000512 Chenopodium quinoa HOM05D002182 ORTHO05D004671 2.3e-35 152.5 105 64.8
ECA248G2894 Erigeron canadensis HOM05D002182 ORTHO05D004671 2.3e-35 152.5 102 68.6
Phvul.009G154850 Phaseolus vulgaris HOM05D002182 ORTHO05D004671 2.3e-35 152.5 116 61.2
AUR62006857 Chenopodium quinoa HOM05D002182 ORTHO05D004671 3.0e-35 152.1 105 65.7
Ciclev10003112m.g Citrus clementina HOM05D002182 ORTHO05D004671 3.0e-35 152.1 106 64.2
Lalb_Chr11g0068591 Lupinus albus HOM05D002182 ORTHO05D004671 3.0e-35 152.1 100 68.0
QL10p041326 Quercus lobata HOM05D002182 ORTHO05D004671 3.9e-35 151.8 105 65.7
HPP92_005922 Vanilla planifolia HOM05D002182 ORTHO05D004671 3.9e-35 151.8 105 65.7
Aa31LG1G17970 Aethionema arabicum HOM05D002182 ORTHO05D004671 5.1e-35 151.4 109 61.5
Thecc.01G137400 Theobroma cacao HOM05D002182 ORTHO05D004671 5.1e-35 151.4 116 59.5
Ah.06g191020 Amaranthus hybridus HOM05D002182 ORTHO05D004671 6.6e-35 151.0 105 64.8
Manes.13G078050 Manihot esculenta HOM05D002182 ORTHO05D004671 6.6e-35 151.0 100 69.0
Gohir.A11G057700 Gossypium hirsutum HOM05D002182 ORTHO05D004671 8.6e-35 150.6 116 60.3
unitig_62.g23374 Utricularia gibba HOM05D002182 ORTHO05D004671 8.6e-35 150.6 109 60.6
Glyma.06G155600 Glycine max HOM05D002182 ORTHO05D004671 1.5e-34 149.8 116 59.5
VMungo1309G0220 Vigna mungo HOM05D002182 ORTHO05D004671 1.9e-34 149.4 116 60.3
COL.COLO4_35815 Corchorus olitorius HOM05D002182 ORTHO05D004671 4.3e-34 148.3 116 58.6
Psat5g060640 Pisum sativum HOM05D002182 ORTHO05D004671 7.3e-34 147.5 100 65.0
CiPaw.04G079900 Carya illinoinensis HOM05D002182 ORTHO05D004671 1.6e-33 146.4 105 64.8
TWI79G1433 Tripterygium wilfordii HOM05D002182 ORTHO05D004671 2.1e-33 146.0 102 64.7
Cfa002178 Carpinus fangiana HOM05D002182 ORTHO05D004671 3.1e-32 142.1 105 62.9
Aqoxy5G02289 Aquilegia oxysepala HOM05D002182 ORTHO05D004671 6.9e-32 141.0 122 54.9
Cc07_g19240 Coffea canephora HOM05D002182 ORTHO05D004671 8.9e-32 140.6 105 61.0
Sabra05G0055200 Salix brachista HOM05D002182 ORTHO05D004671 9.9e-31 137.1 146 48.6
Atru.chr4.980 Acer truncatum HOM05D002182 ORTHO05D004671 8.4e-22 107.5 102 52.0
Medtr5g061930 Medicago truncatula HOM05D002182 ORTHO05D004671 5.4e-21 104.8 110 43.6
CSS0041549 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 1.2e-20 103.6 66 71.2
CSS0026830 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 2.1e-20 102.8 58 72.4
Haze_26976 Corylus avellana HOM05D002182 ORTHO05D004671 1.8e-19 99.8 120 45.0
CDE09G0651 Ceratophyllum demersum HOM05D002182 ORTHO05D004671 6.7e-19 97.8 58 69.0
ClCG10G017010 Citrullus lanatus HOM05D002182 ORTHO05D004671 1.3e-17 93.6 55 72.7
Cfa022087 Carpinus fangiana HOM05D002182 ORTHO05D004671 2.4e-16 89.4 110 42.7
PRCOL_00003192 Prasinoderma coloniale HOM05D002182 ORTHO05D004671 9.0e-16 87.4 90 48.9
MCO11G433 Micromonas commoda HOM05D002182 ORTHO05D004671 2.6e-15 85.9 107 43.0
Haze_25331 Corylus avellana HOM05D002182 ORTHO05D004671 2.2e-14 82.8 58 60.3
SGA_v2.0_scaffold54G19590 Striga asiatica HOM05D002182 ORTHO05D004671 2.8e-09 65.9 64 50.0
PSO170G3411 Papaver somniferum HOM05D002182 ORTHO05D004671 1.8e-08 63.2 108 33.3
MCO11G923 Micromonas commoda HOM05D002182 ORTHO05D008382 2.4e-08 62.8 103 35.0
Pp3c8_22620 Physcomitrium patens HOM05D002182 ORTHO05D008382 9.0e-08 60.8 98 38.8


User provided reference genes

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