Gene: PSO384G2582
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO384G2582
- Transcript Identifier PSO384G2582.01
- Gene Type Coding gene
- Location NC_039368.1 : 5984927-5987758 : negative
Gene Family Information
- ID HOM05D002182
- #Genes/#Species 307/100
- Phylogenetic origin
- ID ORTHO05D004671
- #Genes/#Species 174/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid rna-XM_026570261.1
- pid XP_026426046.1
- id gene-LOC113322215
Descriptions
- product DNA topoisomerase 3-alpha-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006265 | IEA | InterPro | DNA topological change | |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT5G63920 |
| GO:0051321 | ISO | PLAZA Integrative Orthology | meiotic cell cycle | AT5G63920 |
| GO:0000712 | ISO | PLAZA Integrative Orthology | resolution of meiotic recombination intermediates | AT5G63920 |
| GO:0007059 | ISO | PLAZA Integrative Orthology | chromosome segregation | AT5G63920 |
| GO:0000278 | ISO | PLAZA Integrative Orthology | mitotic cell cycle | AT5G63920 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003916 | IEA | InterPro | DNA topoisomerase activity | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003917 | IEA | InterPro | DNA topoisomerase type I (single strand cut, ATP-independent) activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | IEA | InterPro | chromosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013498 | DNA topoisomerase, type IA, zn finger |
| IPR013497 | DNA topoisomerase, type IA, central |
| IPR006171 | TOPRIM domain |
| IPR013826 | DNA topoisomerase, type IA, central region, subdomain 3 |
| IPR010666 | Zinc finger, GRF-type |
| IPR001878 | Zinc finger, CCHC-type |
| IPR034144 | DNA topoisomerase 3-like, TOPRIM domain |
| IPR003601 | DNA topoisomerase, type IA, domain 2 |
| IPR013824 | DNA topoisomerase, type IA, central region, subdomain 1 |
| IPR013825 | DNA topoisomerase, type IA, central region, subdomain 2 |
| IPR023405 | DNA topoisomerase, type IA, core domain |
| IPR003602 | DNA topoisomerase, type IA, DNA-binding domain |
| IPR000380 | DNA topoisomerase, type IA |
| Mapman id | Description |
|---|---|
| 13.3.5.5.3.2 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.RTR Holliday junction dissolution complex.topoisomerase component TOP3-alpha |