Gene: Lsat_1_v5_gn_1_78841

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_1_78841
  • Transcript Identifier Lsat_1_v5_gn_1_78841.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_1 : 98309882-98319433 : positive

Gene Family Information

  • ID HOM05D002182
  • #Genes/#Species 307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_1_78841.v5
  • pacid 38945397

Descriptions

  • Description PTHR11390:SF21 - DNA TOPOISOMERASE 3-ALPHA
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006265
IEA
InterProDNA topological change
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT5G63920
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT5G63920
GO:0000712
ISO
PLAZA Integrative Orthologyresolution of meiotic recombination intermediates AT5G63920
GO:0007059
ISO
PLAZA Integrative Orthologychromosome segregation AT5G63920
GO:0000278
ISO
PLAZA Integrative Orthologymitotic cell cycle AT5G63920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003916
IEA
InterProDNA topoisomerase activity
GO:0003917
IEA
InterProDNA topoisomerase type I (single strand cut, ATP-independent) activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013497 DNA topoisomerase, type IA, central
IPR006171 TOPRIM domain
IPR013824 DNA topoisomerase, type IA, central region, subdomain 1
IPR013825 DNA topoisomerase, type IA, central region, subdomain 2
IPR000380 DNA topoisomerase, type IA
IPR013826 DNA topoisomerase, type IA, central region, subdomain 3
IPR023405 DNA topoisomerase, type IA, core domain
IPR034144 DNA topoisomerase 3-like, TOPRIM domain
IPR003601 DNA topoisomerase, type IA, domain 2
IPR003602 DNA topoisomerase, type IA, DNA-binding domain
Mapman id Description
13.3.5.5.3.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.RTR Holliday junction dissolution complex.topoisomerase component TOP3-alpha