Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g44920 Chara braunii HOM05D003786 ORTHO05D004375 2.9e-205 718.4 381 100.0
SEGI_12201 Sequoiadendron giganteum HOM05D003786 ORTHO05D004375 5.8e-28 129.4 165 41.2
Medtr7g092500 Medicago truncatula HOM05D003786 ORTHO05D004375 3.8e-27 126.7 167 40.7
arahy.Tifrunner.gnm1.ann1.XC8HKJ Arachis hypogaea HOM05D003786 ORTHO05D004375 8.4e-27 125.6 197 37.1
arahy.Tifrunner.gnm1.ann1.2E7PU8 Arachis hypogaea HOM05D003786 ORTHO05D004375 4.2e-26 123.2 195 37.4
Phvul.001G137825 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 4.2e-26 123.2 194 40.2
Psat6g109040 Pisum sativum HOM05D003786 ORTHO05D004375 1.6e-25 121.3 167 40.7
VMungo1127G2311 Vigna mungo HOM05D003786 ORTHO05D004375 2.1e-25 120.9 194 37.6
CsaV3_6G021540 Cucumis sativus L. HOM05D003786 ORTHO05D004375 3.5e-25 120.2 164 43.9
Phvul.001G138100 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 3.5e-25 120.2 194 39.7
TPR.G4813 Trifolium pratense HOM05D003786 ORTHO05D004375 4.6e-25 119.8 168 39.9
Glyma.04G189200 Glycine max HOM05D003786 ORTHO05D004375 6.0e-25 119.4 178 39.3
Psat3g070480 Pisum sativum HOM05D003786 ORTHO05D004375 1.0e-24 118.6 168 39.9
Glyma.10G072100 Glycine max HOM05D003786 ORTHO05D004375 1.3e-24 118.2 178 39.3
THA.LOC104799484 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 1.3e-24 118.2 168 43.5
Ca_08491_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 2.3e-24 117.5 169 39.1
Ca_30036_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 2.3e-24 117.5 169 39.1
Cpa.g.sc318.5 Carica papaya HOM05D003786 ORTHO05D004375 3.9e-24 116.7 171 41.5
ClCG02G020870 Citrullus lanatus HOM05D003786 ORTHO05D004375 3.9e-24 116.7 164 42.1
Mapoly0072s0108 Marchantia polymorpha HOM05D003786 ORTHO05D004375 3.9e-24 116.7 178 36.5
MD11G1123700 Malus domestica HOM05D003786 ORTHO05D004375 5.1e-24 116.3 166 39.2
Lj2P1038T21 Lonicera japonica HOM05D003786 ORTHO05D004375 1.5e-23 114.8 166 41.0
TPR.G28524 Trifolium pratense HOM05D003786 ORTHO05D004375 1.5e-23 114.8 167 37.7
Gohir.D13G002900 Gossypium hirsutum HOM05D003786 ORTHO05D004375 1.9e-23 114.4 166 41.0
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 2.5e-23 114.0 166 40.4
Actinidia09138 Actinidia chinensis HOM05D003786 ORTHO05D004375 3.3e-23 113.6 167 39.5
Lalb_Chr25g0287531 Lupinus albus HOM05D003786 ORTHO05D004375 4.3e-23 113.2 167 38.9
THA.LOC104810009 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 4.3e-23 113.2 169 41.4
Cc00_g24070 Coffea canephora HOM05D003786 ORTHO05D004375 5.6e-23 112.8 166 39.2
Pp3c27_2720 Physcomitrium patens HOM05D003786 ORTHO05D004375 5.6e-23 112.8 165 38.8
Dinv01513 Davidia involucrata HOM05D003786 ORTHO05D004375 7.4e-23 112.5 166 38.6
Lj1g0003252 Lotus japonicus HOM05D003786 ORTHO05D004375 7.4e-23 112.5 194 35.1
PSO541G4585 Papaver somniferum HOM05D003786 ORTHO05D004375 7.4e-23 112.5 165 38.8
Aa31LG4G14750 Aethionema arabicum HOM05D003786 ORTHO05D004375 9.6e-23 112.1 163 41.7
Gohir.A13G003000 Gossypium hirsutum HOM05D003786 ORTHO05D004375 9.6e-23 112.1 166 39.8
Gorai.013G002800 Gossypium raimondii HOM05D003786 ORTHO05D004375 9.6e-23 112.1 166 39.8
PGSC0003DMG401003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 9.6e-23 112.1 169 35.5
PGSC0003DMG402003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 9.6e-23 112.1 169 35.5
MELO3C025739.2 Cucumis melo HOM05D003786 ORTHO05D004375 1.3e-22 111.7 139 44.6
AT5G60230 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 1.6e-22 111.3 167 40.7
CSS0041475 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 1.6e-22 111.3 166 38.0
CANSAT54G0858 Cannabis sativa HOM05D003786 ORTHO05D004375 1.6e-22 111.3 170 38.2
Prupe.6G093000 Prunus persica HOM05D003786 ORTHO05D004375 1.6e-22 111.3 166 40.4
CSS0045889 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 2.1e-22 110.9 166 37.3
TAR369G0701 Trochodendron aralioides HOM05D003786 ORTHO05D004375 2.1e-22 110.9 166 39.2
AL5G24200 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 2.8e-22 110.5 167 41.3
AT3G45590 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 2.8e-22 110.5 167 40.7
DCAR_006383 Daucus carota HOM05D003786 ORTHO05D004375 2.8e-22 110.5 166 41.0
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 2.8e-22 110.5 167 38.3
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.8e-22 110.5 167 38.3
RcHm_v2.0_Chr3g0449171 Rosa chinensis HOM05D003786 ORTHO05D004375 2.8e-22 110.5 167 38.9
Aqoxy2G03481_Aqoxy2G03482 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 3.7e-22 110.2 165 38.2
Sopen06g031770 Solanum pennellii HOM05D003786 ORTHO05D004375 3.7e-22 110.2 166 37.3
BraA10t43819Z Brassica rapa HOM05D003786 ORTHO05D004375 4.8e-22 109.8 167 38.3
CDE05G0279 Ceratophyllum demersum HOM05D003786 ORTHO05D004375 4.8e-22 109.8 168 38.1
COL.COLO4_25255 Corchorus olitorius HOM05D003786 ORTHO05D004375 4.8e-22 109.8 166 38.6
Eucgr.J01130 Eucalyptus grandis HOM05D003786 ORTHO05D004375 4.8e-22 109.8 167 38.3
Rhsim13G0091800 Rhododendron simsii HOM05D003786 ORTHO05D004375 4.8e-22 109.8 166 39.8
Thecc.09G261300 Theobroma cacao HOM05D003786 ORTHO05D004375 4.8e-22 109.8 168 39.9
DCAR_006378 Daucus carota HOM05D003786 ORTHO05D004375 6.2e-22 109.4 166 40.4
Solyc06g075350.3 Solanum lycopersicum HOM05D003786 ORTHO05D004375 6.2e-22 109.4 166 37.3
PGSC0003DMG400007497 Solanum tuberosum HOM05D003786 ORTHO05D004375 6.2e-22 109.4 170 37.1
Aa31LG5G20880 Aethionema arabicum HOM05D003786 ORTHO05D004375 8.1e-22 109.0 167 40.7
A10p17360 Brassica napus HOM05D003786 ORTHO05D004375 8.1e-22 109.0 167 40.1
CAN.G1001.9 Capsicum annuum HOM05D003786 ORTHO05D004375 8.1e-22 109.0 169 37.9
Duzib168G0697 Durio zibethinus HOM05D003786 ORTHO05D004375 8.1e-22 109.0 169 37.9
Sc06g0010590 Simmondsia chinensis HOM05D003786 ORTHO05D004375 8.1e-22 109.0 166 36.7
TWI31G1207 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 8.1e-22 109.0 166 39.2
ECA233G5822 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.1e-21 108.6 196 34.2
Sed0001350 Sechium edule HOM05D003786 ORTHO05D004375 1.1e-21 108.6 167 39.5
Atru.chr3.3714 Acer truncatum HOM05D003786 ORTHO05D004375 1.4e-21 108.2 169 37.9
ATR0763G039 Amborella trichopoda HOM05D003786 ORTHO05D004375 1.4e-21 108.2 167 38.3
BcaB01g04647 Brassica carinata HOM05D003786 ORTHO05D004375 1.4e-21 108.2 167 39.5
Os11g0602400 Oryza sativa ssp. japonica HOM05D003786 ORTHO05D004375 1.4e-21 108.2 169 36.7
A03p11270 Brassica napus HOM05D003786 ORTHO05D004375 1.8e-21 107.8 167 39.5
BraA03t10439Z Brassica rapa HOM05D003786 ORTHO05D004375 1.8e-21 107.8 167 39.5
Manes.11G140700 Manihot esculenta HOM05D003786 ORTHO05D004375 1.8e-21 107.8 169 36.7
Nitab4.5_0000106g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.8e-21 107.8 166 37.3
Potri.009G131500 Populus trichocarpa HOM05D003786 ORTHO05D004375 1.8e-21 107.8 168 37.5
SHI14981 Sapria himalayana HOM05D003786 ORTHO05D004375 1.8e-21 107.8 160 40.0
Ciclev10029956m.g Citrus clementina HOM05D003786 ORTHO05D004375 2.4e-21 107.5 166 38.6
PGR102G2306 Punica granatum HOM05D003786 ORTHO05D004375 2.4e-21 107.5 165 39.4
SalBow3G3536 Salvia bowleyana HOM05D003786 ORTHO05D004375 2.4e-21 107.5 166 40.4
Aqoxy6G02754 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 3.1e-21 107.1 164 39.0
FvH4_6g01503 Fragaria vesca HOM05D003786 ORTHO05D004375 3.1e-21 107.1 165 37.0
Rhsim13G0091500 Rhododendron simsii HOM05D003786 ORTHO05D004375 3.1e-21 107.1 166 38.6
Carub.0005s1880 Capsella rubella HOM05D003786 ORTHO05D004375 4.0e-21 106.7 169 40.8
Carub.0008s2097 Capsella rubella HOM05D003786 ORTHO05D004375 4.0e-21 106.7 169 41.4
AL8G36840 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 5.3e-21 106.3 167 39.5
C03p12960 Brassica napus HOM05D003786 ORTHO05D004375 5.3e-21 106.3 167 39.5
CAN.G1001.22 Capsicum annuum HOM05D003786 ORTHO05D004375 5.3e-21 106.3 166 36.7
Sabra09G0099700 Salix brachista HOM05D003786 ORTHO05D004375 5.3e-21 106.3 168 36.9
vmacro03165 Vaccinium macrocarpon HOM05D003786 ORTHO05D004375 5.3e-21 106.3 169 37.3
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 6.9e-21 105.9 165 37.0
unitig_736.g22421 Utricularia gibba HOM05D003786 ORTHO05D004375 9.0e-21 105.5 167 38.9
BolC3t13758H Brassica oleracea HOM05D003786 ORTHO05D004375 1.2e-20 105.1 167 38.9
Migut.D02178 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.2e-20 105.1 169 39.6
Sabra09G0101900 Salix brachista HOM05D003786 ORTHO05D004375 1.2e-20 105.1 168 36.9
FAN02G2859 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.0e-20 104.4 165 36.4
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 2.0e-20 104.4 165 35.8
C09p52700 Brassica napus HOM05D003786 ORTHO05D004375 2.6e-20 104.0 167 37.7
BolC9t58138H Brassica oleracea HOM05D003786 ORTHO05D004375 2.6e-20 104.0 167 37.7
CiPaw.14G077400 Carya illinoinensis HOM05D003786 ORTHO05D004375 2.6e-20 104.0 193 33.7
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 2.6e-20 104.0 165 35.8
FAN05G4299 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.6e-20 104.0 165 35.8
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 2.6e-20 104.0 165 37.6
Nn2g10664 Nelumbo nucifera HOM05D003786 ORTHO05D004375 2.6e-20 104.0 166 36.7
Migut.I00230 Erythranthe guttata HOM05D003786 ORTHO05D004375 3.4e-20 103.6 166 38.0
HPP92_017618 Vanilla planifolia HOM05D003786 ORTHO05D004375 3.4e-20 103.6 195 34.4
QL01p036748 Quercus lobata HOM05D003786 ORTHO05D004375 4.5e-20 103.2 166 36.7
Thhalv10015366m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 5.8e-20 102.8 165 41.8
SGA_v2.0_scaffold97G29166 Striga asiatica HOM05D003786 ORTHO05D004375 5.8e-20 102.8 166 40.4
Haze_20932 Corylus avellana HOM05D003786 ORTHO05D004375 7.6e-20 102.4 166 34.9
Lsat_1_v5_gn_2_25701 Lactuca sativa HOM05D003786 ORTHO05D004375 7.6e-20 102.4 203 34.5
MSTRG.858 Avicennia marina HOM05D003786 ORTHO05D004375 1.7e-19 101.3 169 37.3
Nitab4.5_0005175g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.7e-19 101.3 166 34.9
Nitab4.5_0021870g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.2e-19 100.9 163 35.0
Peaxi162Scf00072g00045 Petunia axillaris HOM05D003786 ORTHO05D004375 2.2e-19 100.9 166 34.3
MBI03_g28482_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 2.9e-19 100.5 166 33.7
MBI04_g27239_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 2.9e-19 100.5 166 33.1
Nitab4.5_0001421g0060 Nicotiana tabacum HOM05D003786 ORTHO05D004375 6.5e-19 99.4 126 41.3
Haze_23937 Corylus avellana HOM05D003786 ORTHO05D004375 8.4e-19 99.0 166 36.1
HanXRQChr12g0373371 Helianthus annuus HOM05D003786 ORTHO05D004375 8.4e-19 99.0 163 36.8
HanXRQChr01g0022711 Helianthus annuus HOM05D003786 ORTHO05D004375 1.4e-18 98.2 161 36.0
Manes.04G025700 Manihot esculenta HOM05D003786 ORTHO05D004375 1.4e-18 98.2 167 38.9
Sp6g21860 Schrenkiella parvula HOM05D003786 ORTHO05D004375 1.4e-18 98.2 165 38.8
Zm00001eb228610 Zea mays HOM05D003786 ORTHO05D004375 1.4e-18 98.2 161 36.0
Actinidia03750 Actinidia chinensis HOM05D003786 ORTHO05D004375 2.5e-18 97.4 167 35.3
TAR623G0784 Trochodendron aralioides HOM05D003786 ORTHO05D004375 3.2e-18 97.1 163 36.2
SGA_v2.0_scaffold32G12943 Striga asiatica HOM05D003786 ORTHO05D004375 4.2e-18 96.7 166 38.6
AUR62019620 Chenopodium quinoa HOM05D003786 ORTHO05D004375 7.1e-18 95.9 163 35.0
Thhalv10002801m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 7.1e-18 95.9 167 36.5
AUR62042700 Chenopodium quinoa HOM05D003786 ORTHO05D004375 9.3e-18 95.5 163 34.4
AUR62044767 Chenopodium quinoa HOM05D003786 ORTHO05D004375 9.3e-18 95.5 163 34.4
Sabra09G0100500 Salix brachista HOM05D003786 ORTHO05D004375 9.3e-18 95.5 136 37.5
CSS0017411 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 1.2e-17 95.1 166 35.5
AUR62040193 Chenopodium quinoa HOM05D003786 ORTHO05D004375 1.6e-17 94.7 163 33.7
PSO675G4257 Papaver somniferum HOM05D003786 ORTHO05D004375 2.7e-17 94.0 133 38.3
ECA238G1499 Erigeron canadensis HOM05D003786 ORTHO05D004375 3.5e-17 93.6 163 35.6
Lsat_1_v5_gn_6_69540 Lactuca sativa HOM05D003786 ORTHO05D004375 3.5e-17 93.6 182 35.2
Nitab4.5_0000888g0190 Nicotiana tabacum HOM05D003786 ORTHO05D004375 4.6e-17 93.2 97 46.4
Ah.08g211230 Amaranthus hybridus HOM05D003786 ORTHO05D004375 7.9e-17 92.4 169 33.1
Ah.12g063340 Amaranthus hybridus HOM05D003786 ORTHO05D004375 1.0e-16 92.0 166 33.1
Medtr0262s0030 Medicago truncatula HOM05D003786 ORTHO05D004375 1.0e-16 92.0 102 43.1
TWI75G0263 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 1.3e-16 91.7 166 34.9
Peaxi162Scf00272g00092 Petunia axillaris HOM05D003786 ORTHO05D004375 2.3e-16 90.9 140 37.9
ECA246G5003 Erigeron canadensis HOM05D003786 ORTHO05D004375 3.0e-16 90.5 126 38.9
RcHm_v2.0_Chr5g0061031 Rosa chinensis HOM05D003786 ORTHO05D004375 3.0e-16 90.5 167 33.5
Cre02.g096900 Chlamydomonas reinhardtii HOM05D003786 ORTHO05D004375 3.9e-16 90.1 147 38.8
Migut.I00232 Erythranthe guttata HOM05D003786 ORTHO05D004375 5.1e-16 89.7 134 38.8
AUR62039602 Chenopodium quinoa HOM05D003786 ORTHO05D004375 8.7e-16 89.0 125 38.4
EL10Ac6g14823 Beta vulgaris HOM05D003786 ORTHO05D004375 1.1e-15 88.6 166 32.5
Migut.I00240 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.1e-15 88.6 138 38.4
PRCOL_00003701 Prasinoderma coloniale HOM05D003786 ORTHO05D004375 1.9e-15 87.8 167 34.7
Gohir.D13G224600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 4.3e-15 86.7 166 33.1
Migut.I00250 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.3e-14 85.1 166 36.1
Gorai.013G255400 Gossypium raimondii HOM05D003786 ORTHO05D004375 1.3e-14 85.1 166 33.1
Oeu022264.1 Olea europaea HOM05D003786 ORTHO05D004375 1.3e-14 85.1 133 39.1
MD11G1124300 Malus domestica HOM05D003786 ORTHO05D004375 2.8e-14 84.0 91 44.0
Potri.014G083401 Populus trichocarpa HOM05D003786 ORTHO05D004375 4.8e-14 83.2 95 44.2
GSVIVG01025123001 Vitis vinifera HOM05D003786 ORTHO05D004375 1.8e-13 81.3 165 33.3
BolC3t13761H Brassica oleracea HOM05D003786 ORTHO05D004375 4.1e-13 80.1 88 46.6
Glyma.19G143800 Glycine max HOM05D003786 ORTHO05D004375 5.8e-12 76.3 91 44.0
BcaB08g36317 Brassica carinata HOM05D003786 ORTHO05D004375 1.3e-11 75.1 167 34.1
CARHR150050 Cardamine hirsuta HOM05D003786 ORTHO05D004375 1.3e-11 75.1 121 36.4
Nitab4.5_0005175g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.1e-10 72.0 91 35.2
Cfa023727 Carpinus fangiana HOM05D003786 ORTHO05D004375 1.6e-09 68.2 197 29.4
MCO01G070 Micromonas commoda HOM05D003786 ORTHO05D004375 1.0e-08 65.5 202 25.2
SGA_v2.0_scaffold146G36226 Striga asiatica HOM05D003786 ORTHO05D004375 2.3e-08 64.3 61 42.6
Lsat_1_v5_gn_2_25281 Lactuca sativa HOM05D003786 ORTHO05D004375 2.5e-07 60.8 69 43.5
TAR376G1065 Trochodendron aralioides HOM05D000267 ORTHO05D004375 3.7e-06 57.0 69 39.1
Migut.I00245 Erythranthe guttata HOM05D003786 ORTHO05D004375 8.2e-06 55.8 73 41.1


User provided reference genes

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