Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G657.3 Capsicum annuum HOM05D005037 ORTHO05D006274 3.3e-201 704.9 370 100.0
PGSC0003DMG400024852 Solanum tuberosum HOM05D005037 ORTHO05D006274 7.3e-185 650.6 373 91.4
Peaxi162Scf00066g01930 Petunia axillaris HOM05D005037 ORTHO05D006274 1.2e-182 643.3 373 91.4
Nitab4.5_0000174g0240 Nicotiana tabacum HOM05D005037 ORTHO05D006274 4.9e-181 637.9 373 90.9
Nitab4.5_0002972g0050 Nicotiana tabacum HOM05D005037 ORTHO05D006274 7.1e-180 634.0 373 90.9
Sopen04g026520 Solanum pennellii HOM05D005037 ORTHO05D006274 1.4e-175 619.8 373 88.2
Solyc04g064570.3 Solanum lycopersicum HOM05D005037 ORTHO05D006274 4.0e-175 618.2 373 87.9
Cc10_g13130 Coffea canephora HOM05D005037 ORTHO05D006274 6.4e-157 557.8 373 76.7
TAR381G0890 Trochodendron aralioides HOM05D005037 ORTHO05D006274 6.4e-157 557.8 365 75.3
Oeu002392.1 Olea europaea HOM05D005037 ORTHO05D006274 2.1e-155 552.7 373 75.9
MSTRG.1382 Avicennia marina HOM05D005037 ORTHO05D006274 4.6e-155 551.6 373 74.5
SalBow7G3864 Salvia bowleyana HOM05D005037 ORTHO05D006274 1.9e-153 546.2 373 74.3
TWI32G0322 Tripterygium wilfordii HOM05D005037 ORTHO05D006274 7.4e-153 544.3 366 75.4
Atru.chr13.1666 Acer truncatum HOM05D005037 ORTHO05D006274 2.1e-152 542.7 373 73.5
Ciclev10001639m.g Citrus clementina HOM05D005037 ORTHO05D006274 2.8e-152 542.3 373 74.0
Eucgr.G02653 Eucalyptus grandis HOM05D005037 ORTHO05D006274 2.8e-152 542.3 373 75.6
Actinidia16585 Actinidia chinensis HOM05D005037 ORTHO05D006274 6.2e-152 541.2 365 75.9
Hund17388 Selenicereus undatus HOM05D005037 ORTHO05D006274 3.1e-151 538.9 375 73.3
Sc02g0004500 Simmondsia chinensis HOM05D005037 ORTHO05D006274 3.4e-150 535.4 373 72.9
PGR142G4097 Punica granatum HOM05D005037 ORTHO05D006274 7.6e-150 534.3 374 74.1
EL10Ac4g08872 Beta vulgaris HOM05D005037 ORTHO05D006274 1.3e-149 533.5 380 71.3
GSVIVG01010010001 Vitis vinifera HOM05D005037 ORTHO05D006274 1.3e-149 533.5 366 75.1
EL10Ac1g01450 Beta vulgaris HOM05D005037 ORTHO05D006274 3.8e-149 531.9 380 71.1
DCAR_015244 Daucus carota HOM05D005037 ORTHO05D006274 3.8e-149 531.9 381 71.7
Migut.C01102 Erythranthe guttata HOM05D005037 ORTHO05D006274 3.8e-149 531.9 373 71.3
Gohir.D02G074100 Gossypium hirsutum HOM05D005037 ORTHO05D006274 6.5e-149 531.2 385 72.7
Thecc.08G141200 Theobroma cacao HOM05D005037 ORTHO05D006274 6.5e-149 531.2 385 72.7
Nn5g28553 Nelumbo nucifera HOM05D005037 ORTHO05D006274 1.1e-148 530.4 365 74.0
TWI60G0144 Tripterygium wilfordii HOM05D005037 ORTHO05D006274 1.4e-148 530.0 379 72.0
Potri.002G073200 Populus trichocarpa HOM05D005037 ORTHO05D006274 5.5e-148 528.1 365 73.2
Gohir.A02G068100 Gossypium hirsutum HOM05D005037 ORTHO05D006274 7.1e-148 527.7 385 72.5
Duzib041G0013 Durio zibethinus HOM05D005037 ORTHO05D006274 1.6e-147 526.6 383 71.5
Gorai.005G083500 Gossypium raimondii HOM05D005037 ORTHO05D006274 2.1e-147 526.2 386 72.5
DCAR_019815 Daucus carota HOM05D005037 ORTHO05D006274 3.9e-146 521.9 381 70.1
Manes.02G173400 Manihot esculenta HOM05D005037 ORTHO05D006274 3.9e-146 521.9 365 71.8
Aqoxy6G00356 Aquilegia oxysepala HOM05D005037 ORTHO05D006274 5.1e-146 521.5 373 71.6
Sp1g33080 Schrenkiella parvula HOM05D005037 ORTHO05D006274 8.7e-146 520.8 379 69.4
Duzib116G0940 Durio zibethinus HOM05D005037 ORTHO05D006274 7.4e-145 517.7 385 70.4
Sabra05G0142600 Salix brachista HOM05D005037 ORTHO05D006274 7.4e-145 517.7 366 71.6
Cpa.g.sc13.102 Carica papaya HOM05D005037 ORTHO05D006274 2.8e-144 515.8 374 70.3
A10p07730 Brassica napus HOM05D005037 ORTHO05D006274 1.4e-143 513.5 379 68.9
BraSC36t46032Z Brassica rapa HOM05D005037 ORTHO05D006274 1.4e-143 513.5 379 68.9
BolC5t32377H Brassica oleracea HOM05D005037 ORTHO05D006274 1.8e-143 513.1 379 69.4
A05p21790 Brassica napus HOM05D005037 ORTHO05D006274 3.1e-143 512.3 381 68.8
BraA05t21100Z Brassica rapa HOM05D005037 ORTHO05D006274 3.1e-143 512.3 381 68.8
BcaC05g27657 Brassica carinata HOM05D005037 ORTHO05D006274 9.0e-143 510.8 379 68.6
Rhsim03G0093500 Rhododendron simsii HOM05D005037 ORTHO05D006274 9.0e-143 510.8 376 71.8
AL1G51980 Arabidopsis lyrata HOM05D005037 ORTHO05D006274 1.2e-142 510.4 383 67.9
Ah.10g032080 Amaranthus hybridus HOM05D005037 ORTHO05D006274 1.5e-142 510.0 375 69.6
BcaB02g11416 Brassica carinata HOM05D005037 ORTHO05D006274 1.5e-142 510.0 379 68.1
C05p36450 Brassica napus HOM05D005037 ORTHO05D006274 1.5e-142 510.0 379 68.6
Potri.005G186700 Populus trichocarpa HOM05D005037 ORTHO05D006274 1.5e-142 510.0 366 70.5
Carub.0001s3480 Capsella rubella HOM05D005037 ORTHO05D006274 2.0e-142 509.6 383 66.6
CARHR035400 Cardamine hirsuta HOM05D005037 ORTHO05D006274 5.8e-142 508.1 385 67.0
AUR62027497 Chenopodium quinoa HOM05D005037 ORTHO05D006274 5.8e-142 508.1 375 69.3
Thhalv10011594m.g Eutrema salsugineum HOM05D005037 ORTHO05D006274 1.3e-141 506.9 381 68.0
AT1G43860 Arabidopsis thaliana HOM05D005037 ORTHO05D006274 2.2e-141 506.1 383 66.3
BcaB07g33972 Brassica carinata HOM05D005037 ORTHO05D006274 2.2e-141 506.1 379 68.6
Haze_17689 Corylus avellana HOM05D005037 ORTHO05D006274 2.9e-141 505.8 369 71.0
vmacro08710 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 6.5e-141 504.6 376 69.4
CiPaw.16G018700 Carya illinoinensis HOM05D005037 ORTHO05D006274 8.4e-141 504.2 366 70.5
AUR62033983 Chenopodium quinoa HOM05D005037 ORTHO05D006274 1.1e-140 503.8 375 69.1
MD05G1011400 Malus domestica HOM05D005037 ORTHO05D006274 1.4e-140 503.4 386 66.3
CANSAT54G1160 Cannabis sativa HOM05D005037 ORTHO05D006274 2.5e-140 502.7 372 68.5
HanXRQChr04g0109491 Helianthus annuus HOM05D005037 ORTHO05D006274 3.2e-140 502.3 373 69.4
ECA233G3664 Erigeron canadensis HOM05D005037 ORTHO05D006274 7.1e-140 501.1 360 70.8
ATR1136G011 Amborella trichopoda HOM05D005037 ORTHO05D006274 1.6e-139 500.0 376 68.6
PSO541G3185 Papaver somniferum HOM05D005037 ORTHO05D006274 3.5e-139 498.8 378 69.0
Lsat_1_v5_gn_1_9740 Lactuca sativa HOM05D005037 ORTHO05D006274 7.9e-139 497.7 373 68.9
PSO675G6067 Papaver somniferum HOM05D005037 ORTHO05D006274 2.3e-138 496.1 378 68.5
SGA_v2.0_scaffold25G11149 Striga asiatica HOM05D005037 ORTHO05D006274 3.0e-138 495.7 401 68.1
THA.LOC104798858 Tarenaya hassleriana HOM05D005037 ORTHO05D006274 6.7e-138 494.6 392 66.6
Prupe.8G016400 Prunus persica HOM05D005037 ORTHO05D006274 1.1e-137 493.8 386 65.5
RcHm_v2.0_Chr6g0277561 Rosa chinensis HOM05D005037 ORTHO05D006274 2.5e-137 492.7 379 66.5
CDE02G2089 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 1.6e-136 490.0 367 67.6
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 2.2e-136 489.6 365 67.4
Aa31LG6G9500 Aethionema arabicum HOM05D005037 ORTHO05D006274 3.7e-136 488.8 386 65.8
HPP92_020501 Vanilla planifolia HOM05D005037 ORTHO05D006274 8.2e-136 487.6 365 68.5
FAN24G2486 Fragaria x ananassa HOM05D005037 ORTHO05D006274 2.4e-135 486.1 389 65.3
FvH4_2g15010 Fragaria vesca HOM05D005037 ORTHO05D006274 3.1e-135 485.7 387 65.4
VMungo0540G1405 Vigna mungo HOM05D005037 ORTHO05D006274 4.5e-134 481.9 374 66.3
arahy.Tifrunner.gnm1.ann1.E7XDIB Arachis hypogaea HOM05D005037 ORTHO05D006274 7.7e-134 481.1 377 66.6
arahy.Tifrunner.gnm1.ann1.HCD3KF Arachis hypogaea HOM05D005037 ORTHO05D006274 1.3e-133 480.3 377 66.6
QL09p029039 Quercus lobata HOM05D005037 ORTHO05D006274 1.3e-133 480.3 376 66.5
PSO421G0325 Papaver somniferum HOM05D005037 ORTHO05D006274 1.7e-133 479.9 371 65.0
PSO673G0007 Papaver somniferum HOM05D005037 ORTHO05D006274 2.2e-133 479.6 371 64.7
arahy.Tifrunner.gnm1.ann1.RY8QGI Arachis hypogaea HOM05D005037 ORTHO05D006274 5.0e-133 478.4 376 66.2
MELO3C010584.2 Cucumis melo HOM05D005037 ORTHO05D006274 2.5e-132 476.1 369 67.5
Lalb_Chr21g0311851 Lupinus albus HOM05D005037 ORTHO05D006274 5.5e-132 474.9 367 67.3
FAN27G1276 Fragaria x ananassa HOM05D005037 ORTHO05D006274 9.4e-132 474.2 389 64.3
Phvul.006G102500 Phaseolus vulgaris HOM05D005037 ORTHO05D006274 1.2e-131 473.8 374 66.0
Lalb_Chr02g0149921 Lupinus albus HOM05D005037 ORTHO05D006274 2.1e-131 473.0 366 66.4
CSS0001186 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 2.7e-131 472.6 327 73.4
ClCG08G002740 Citrullus lanatus HOM05D005037 ORTHO05D006274 2.7e-131 472.6 369 66.4
Lj4g0018852 Lotus japonicus HOM05D005037 ORTHO05D006274 4.6e-131 471.9 374 66.3
CsaV3_6G035600 Cucumis sativus L. HOM05D005037 ORTHO05D006274 7.9e-131 471.1 369 66.4
Sed0001170 Sechium edule HOM05D005037 ORTHO05D006274 6.7e-130 468.0 367 66.2
Ca_30116_v3 Cicer arietinum L. HOM05D005037 ORTHO05D006274 3.3e-129 465.7 367 64.9
Lj1g0018953 Lotus japonicus HOM05D005037 ORTHO05D006274 3.7e-128 462.2 374 65.5
ECA234G0804 Erigeron canadensis HOM05D005037 ORTHO05D006274 6.3e-128 461.5 365 65.5
Medtr6g085170 Medicago truncatula HOM05D005037 ORTHO05D006274 9.1e-127 457.6 367 64.3
Psat1g039480 Pisum sativum HOM05D005037 ORTHO05D006274 2.6e-126 456.1 366 63.4
Glyma.14G119400 Glycine max HOM05D005037 ORTHO05D006274 3.4e-126 455.7 374 63.9
TPR.G31447 Trifolium pratense HOM05D005037 ORTHO05D006274 7.7e-126 454.5 367 63.5
Lj4A690T47 Lonicera japonica HOM05D005037 ORTHO05D006274 2.2e-125 453.0 321 73.8
Glyma.11G142700 Glycine max HOM05D005037 ORTHO05D006274 8.8e-122 441.0 374 64.2
Oeu001556.2 Olea europaea HOM05D005037 ORTHO05D006274 2.8e-120 436.0 366 63.1
SEGI_36163 Sequoiadendron giganteum HOM05D005037 ORTHO05D006274 2.8e-120 436.0 373 62.5
Os08g0107500 Oryza sativa ssp. japonica HOM05D005037 ORTHO05D006274 8.2e-120 434.5 374 59.9
SHI09275 Sapria himalayana HOM05D005037 ORTHO05D006274 1.2e-118 430.6 368 62.8
Dinv41137 Davidia involucrata HOM05D005037 ORTHO05D006274 1.7e-117 426.8 360 65.8
PSO673G0037 Papaver somniferum HOM05D005037 ORTHO05D006274 5.0e-117 425.2 356 61.5
Zm00001eb260230 Zea mays HOM05D005037 ORTHO05D006274 1.5e-116 423.7 374 59.4
unitig_747.g21501 Utricularia gibba HOM05D005037 ORTHO05D006274 2.7e-115 419.5 283 76.7
CSS0023189 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 5.2e-114 415.2 327 66.7
HPP92_020498 Vanilla planifolia HOM05D005037 ORTHO05D006274 2.2e-112 409.8 319 67.1
Pp3c4_180 Physcomitrium patens HOM05D005037 ORTHO05D006274 1.0e-109 401.0 390 54.4
SMO348G0060 Selaginella moellendorffii HOM05D005037 ORTHO05D006274 2.7e-107 392.9 371 56.1
COL.COLO4_33811 Corchorus olitorius HOM05D005037 ORTHO05D006274 1.3e-101 374.0 385 55.3
AagrBONN_evm.TU.Sc2ySwM_117.3544 Anthoceros agrestis HOM05D005037 ORTHO05D006274 2.3e-98 363.2 366 52.5
Ca_25512_v3 Cicer arietinum L. HOM05D005037 ORTHO05D006274 1.2e-97 360.9 317 59.0
Cfa018383 Carpinus fangiana HOM05D005037 ORTHO05D006274 1.5e-97 360.5 308 62.0
vmacro21120 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 9.8e-97 357.8 287 63.4
FAN20G2613 Fragaria x ananassa HOM05D005037 ORTHO05D006274 1.1e-79 301.2 187 83.4
SMO272G0010 Selaginella moellendorffii HOM05D005037 ORTHO05D006274 6.0e-70 268.9 161 83.2
FAN15G0656 Fragaria x ananassa HOM05D005037 ORTHO05D006274 1.1e-68 264.6 148 89.9
PRCOL_00006527 Prasinoderma coloniale HOM05D005037 ORTHO05D006274 6.2e-67 258.8 360 42.2
PSO729G0215 Papaver somniferum HOM05D005037 ORTHO05D006274 3.1e-66 256.5 258 55.8
Cre01.g017500 Chlamydomonas reinhardtii HOM05D005037 ORTHO05D006274 3.2e-63 246.5 248 50.4
PSO017G3306 Papaver somniferum HOM05D005037 ORTHO05D006274 6.8e-58 228.8 329 44.4
MD05G1011500 Malus domestica HOM05D005037 ORTHO05D006274 8.4e-56 221.9 246 48.4
CSS0016864 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 7.8e-54 215.3 159 71.1
CBR_g48721 Chara braunii HOM05D005037 ORTHO05D006274 3.9e-53 213.0 329 39.8
CSS0012113 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 7.6e-49 198.7 174 62.1
MCO07G375 Micromonas commoda HOM05D005037 ORTHO05D006274 1.3e-48 198.0 172 55.8
CSS0029081 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 2.7e-46 190.3 174 60.3
Mapoly0003s0227 Marchantia polymorpha HOM05D005037 ORTHO05D006274 2.4e-42 177.2 228 39.9
C06p00420 Brassica napus HOM05D005037 ORTHO05D006274 2.3e-37 160.6 133 66.9
C06p00390 Brassica napus HOM05D005037 ORTHO05D006274 5.1e-37 159.5 133 66.2
Aa31LG6G9600 Aethionema arabicum HOM05D005037 ORTHO05D006274 1.6e-35 154.5 172 47.7
RcHm_v2.0_Chr2g0145391 Rosa chinensis HOM05D005037 ORTHO05D006274 4.2e-31 139.8 81 87.7
vmacro21119 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 4.3e-28 129.8 121 62.0
Actinidia15170 Actinidia chinensis HOM05D005037 ORTHO05D006274 2.9e-24 117.1 96 55.2
BraA06t27783Z Brassica rapa HOM05D005037 ORTHO05D013118 3.9e-21 106.7 128 46.1
Actinidia15171 Actinidia chinensis HOM05D005037 ORTHO05D006274 1.5e-20 104.8 76 69.7
PSO729G0072 Papaver somniferum HOM05D005037 ORTHO05D006274 8.5e-16 89.0 174 37.9
CSS0019617 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 1.5e-12 78.2 51 78.4
CSS0038364 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 1.5e-12 78.2 51 78.4
BraA01t00001Z Brassica rapa HOM05D005037 ORTHO05D013118 2.5e-12 77.4 84 48.8


User provided reference genes

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