Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 3.5e-28 127.5 61 100.0
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 3.5e-28 127.5 61 100.0
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 1.6e-17 92.0 49 89.8
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 4.8e-17 90.5 49 89.8
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 4.8e-17 90.5 49 89.8
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 1.1e-16 89.4 49 87.8
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 1.1e-16 89.4 49 87.8
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 1.1e-16 89.4 49 87.8
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 1.1e-16 89.4 49 87.8
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.4e-16 89.0 51 80.4
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.4e-16 89.0 51 82.4
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 2.4e-16 88.2 49 87.8
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 3.1e-16 87.8 51 80.4
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 3.1e-16 87.8 51 80.4
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 5.3e-16 87.0 50 82.0
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 5.3e-16 87.0 49 87.8
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 6.9e-16 86.7 50 80.0
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 6.9e-16 86.7 52 76.9
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 9.0e-16 86.3 49 81.6
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 9.0e-16 86.3 49 81.6
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 9.0e-16 86.3 50 80.0
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 1.2e-15 85.9 50 82.0
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 1.2e-15 85.9 50 80.0
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 1.5e-15 85.5 49 85.7
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 1.5e-15 85.5 49 83.7
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 1.5e-15 85.5 50 78.0
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 2.0e-15 85.1 49 81.6
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 2.0e-15 85.1 50 80.0
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 2.0e-15 85.1 50 80.0
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 2.6e-15 84.7 48 83.3
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 2.6e-15 84.7 51 78.4
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 2.6e-15 84.7 49 81.6
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 2.6e-15 84.7 50 80.0
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 2.6e-15 84.7 49 81.6
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 3.4e-15 84.3 49 79.6
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 3.4e-15 84.3 49 77.6
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 4.5e-15 84.0 49 79.6
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 4.5e-15 84.0 50 76.0
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 4.5e-15 84.0 48 83.3
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 5.9e-15 83.6 50 78.0
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 7.7e-15 83.2 50 78.0
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 7.7e-15 83.2 50 76.0
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 7.7e-15 83.2 49 79.6
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 7.7e-15 83.2 49 79.6
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 7.7e-15 83.2 49 77.6
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 1.0e-14 82.8 49 79.6
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.0e-14 82.8 49 77.6
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.0e-14 82.8 49 77.6
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 1.0e-14 82.8 49 77.6
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 1.0e-14 82.8 49 77.6
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 1.3e-14 82.4 50 78.0
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.3e-14 82.4 50 78.0
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 1.7e-14 82.0 50 78.0
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 2.2e-14 81.6 49 77.6
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 2.2e-14 81.6 49 79.6
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 2.2e-14 81.6 50 76.0
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.9e-14 81.3 50 80.0
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 3.8e-14 80.9 49 77.6
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 5.0e-14 80.5 49 77.6
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 5.0e-14 80.5 49 77.6
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 6.5e-14 80.1 48 79.2
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 6.5e-14 80.1 50 78.0
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 6.5e-14 80.1 49 77.6
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 6.5e-14 80.1 50 78.0
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 8.5e-14 79.7 49 73.5
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 1.1e-13 79.3 49 77.6
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 1.1e-13 79.3 49 73.5
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 1.1e-13 79.3 56 66.1
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 1.1e-13 79.3 52 69.2
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 1.4e-13 79.0 44 81.8
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 1.4e-13 79.0 44 81.8
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 1.4e-13 79.0 49 75.5
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 1.4e-13 79.0 50 76.0
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.4e-13 79.0 49 77.6
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 1.9e-13 78.6 50 74.0
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 3.2e-13 77.8 49 73.5
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 4.2e-13 77.4 49 75.5
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 5.5e-13 77.0 49 71.4
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 5.5e-13 77.0 49 71.4
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 9.4e-13 76.3 50 72.0
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 1.2e-12 75.9 48 70.8
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 1.2e-12 75.9 49 71.4
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 1.2e-12 75.9 50 72.0
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.6e-12 75.5 45 77.8
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 1.6e-12 75.5 49 69.4
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 1.6e-12 75.5 49 69.4
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 3.6e-12 74.3 49 69.4
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 4.6e-12 73.9 50 68.0
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 6.1e-12 73.6 56 64.3
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 1.0e-11 72.8 43 76.7
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 1.4e-11 72.4 49 65.3
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 3.9e-11 70.9 50 66.0
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 5.1e-11 70.5 40 85.0
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 5.1e-11 70.5 49 69.4
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 6.7e-11 70.1 48 66.7
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 1.5e-10 68.9 43 72.1
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.6e-10 68.2 43 76.7
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.7e-09 65.5 50 64.0
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 1.4e-08 62.4 58 50.0
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 4.1e-08 60.8 48 60.4
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.5e-07 58.9 44 61.4


User provided reference genes

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