Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p63770 Brassica napus HOM05D000042 ORTHO05D003657 8.2e-65 250.4 138 100.0
BcaC03g18301 Brassica carinata HOM05D000042 ORTHO05D003657 3.2e-61 238.4 138 97.1
A02p43670 Brassica napus HOM05D000042 ORTHO05D003657 2.2e-57 225.7 138 89.1
BcaB07g29773 Brassica carinata HOM05D000042 ORTHO05D003657 2.9e-54 215.3 138 87.7
BraA02t09291Z Brassica rapa HOM05D000042 ORTHO05D003657 2.1e-52 209.1 170 72.4
Thhalv10004949m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 1.8e-48 196.1 138 79.7
Sp2g28150 Schrenkiella parvula HOM05D000042 ORTHO05D003657 1.6e-47 193.0 138 78.3
C03p61060 Brassica napus HOM05D000042 ORTHO05D003657 9.4e-45 183.7 139 77.7
BolC3t18368H Brassica oleracea HOM05D000042 ORTHO05D003657 9.4e-45 183.7 139 77.7
CARHR278980 Cardamine hirsuta HOM05D000042 ORTHO05D003657 6.3e-41 171.0 139 72.7
AL8G42580 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 4.5e-39 164.9 139 69.1
CARHR278990 Cardamine hirsuta HOM05D000042 ORTHO05D003657 5.9e-39 164.5 140 70.0
AT5G65070 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 1.0e-38 163.7 139 67.6
Carub.0008s2591 Capsella rubella HOM05D000042 ORTHO05D003657 1.7e-38 162.9 138 66.7
A06p31890 Brassica napus HOM05D000042 ORTHO05D003657 6.5e-38 161.0 140 70.0
C02p63760 Brassica napus HOM05D000042 ORTHO05D003657 1.5e-37 159.8 138 70.3
Carub.0002s2396 Capsella rubella HOM05D000042 ORTHO05D003657 1.9e-37 159.5 138 66.7
BolC2t12446H Brassica oleracea HOM05D000042 ORTHO05D003657 6.1e-36 154.5 150 67.3
AL2G37250 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 2.3e-35 152.5 138 65.2
BolC2t12443H Brassica oleracea HOM05D000042 ORTHO05D003657 6.8e-35 151.0 135 63.0
BraA06t26122Z Brassica rapa HOM05D000042 ORTHO05D003657 8.8e-35 150.6 170 57.6
BcaB07g29772 Brassica carinata HOM05D000042 ORTHO05D003657 4.9e-33 144.8 138 60.1
AL233U10010 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 6.3e-33 144.4 138 60.1
Aa31LG1G16890 Aethionema arabicum HOM05D000042 ORTHO05D003657 1.4e-32 143.3 135 57.8
BraA02t09290Z Brassica rapa HOM05D000042 ORTHO05D003657 7.0e-32 141.0 105 72.4
Thhalv10005413m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 1.2e-31 140.2 138 58.0
A06p31880 Brassica napus HOM05D000042 ORTHO05D003657 2.0e-31 139.4 138 58.0
Carub.0008s2592 Capsella rubella HOM05D000042 ORTHO05D003657 3.3e-29 132.1 138 59.4
BolC2t12438H Brassica oleracea HOM05D000042 ORTHO05D003657 4.2e-29 131.7 138 60.1
AT5G65060 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 5.5e-29 131.3 104 68.3
C02p63750 Brassica napus HOM05D000042 ORTHO05D003657 1.2e-28 130.2 138 60.1
BcaC03g18294 Brassica carinata HOM05D000042 ORTHO05D003657 1.6e-28 129.8 138 59.4
C02p63700 Brassica napus HOM05D000042 ORTHO05D003657 1.6e-28 129.8 138 59.4
A02p43650 Brassica napus HOM05D000042 ORTHO05D003657 1.4e-27 126.7 107 66.4
AL6G20600 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.8e-27 126.3 136 53.7
AT5G65080 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 2.3e-27 125.9 139 55.4
BcaB07g29771 Brassica carinata HOM05D000042 ORTHO05D003657 2.3e-27 125.9 138 58.0
AL6G20630 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 4.0e-27 125.2 138 53.6
Sp2g28130 Schrenkiella parvula HOM05D000042 ORTHO05D003657 1.5e-26 123.2 133 60.9
AT5G65050 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 4.4e-26 121.7 138 57.2
AT1G77080 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 8.3e-25 117.5 140 52.9
AT5G10140 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 8.3e-25 117.5 138 50.7
Carub.0006s0860 Capsella rubella HOM05D000042 ORTHO05D003657 3.2e-24 115.5 139 51.8
A03p16730 Brassica napus HOM05D000042 ORTHO05D003657 7.0e-24 114.4 138 52.2
A10p27400 Brassica napus HOM05D000042 ORTHO05D003657 7.0e-24 114.4 139 52.5
BraA03t10958Z Brassica rapa HOM05D000042 ORTHO05D003657 7.0e-24 114.4 138 52.2
A02p00340 Brassica napus HOM05D000042 ORTHO05D003657 1.2e-23 113.6 137 53.3
BcaB02g09859 Brassica carinata HOM05D000042 ORTHO05D003657 2.0e-23 112.8 109 65.1
C09p67350 Brassica napus HOM05D000042 ORTHO05D003657 4.6e-23 111.7 139 51.8
C09p67380 Brassica napus HOM05D000042 ORTHO05D003657 4.6e-23 111.7 139 51.8
BolC9t59501H Brassica oleracea HOM05D000042 ORTHO05D003657 4.6e-23 111.7 139 51.8
BraA10t44790Z Brassica rapa HOM05D000042 ORTHO05D003657 4.6e-23 111.7 136 52.9
BcaC04g19339 Brassica carinata HOM05D000042 ORTHO05D003657 5.9e-23 111.3 139 51.8
BcaB08g37135 Brassica carinata HOM05D000042 ORTHO05D003657 7.8e-23 110.9 139 51.8
BcaC01g02737 Brassica carinata HOM05D000042 ORTHO05D003657 7.8e-23 110.9 143 50.3
BraA02t05019Z Brassica rapa HOM05D000042 ORTHO05D003657 7.8e-23 110.9 134 53.0
BolC9t59500H Brassica oleracea HOM05D000042 ORTHO05D003657 1.0e-22 110.5 138 51.4
BcaC04g19334 Brassica carinata HOM05D000042 ORTHO05D003657 2.9e-22 109.0 114 56.1
C09p67320 Brassica napus HOM05D000042 ORTHO05D003657 2.9e-22 109.0 114 56.1
BolC3t14347H Brassica oleracea HOM05D000042 ORTHO05D003657 2.9e-22 109.0 136 52.2
BolC9t59496H Brassica oleracea HOM05D000042 ORTHO05D003657 2.9e-22 109.0 129 52.7
BcaC04g19338 Brassica carinata HOM05D000042 ORTHO05D003657 3.9e-22 108.6 114 56.1
BcaB01g04138 Brassica carinata HOM05D000042 ORTHO05D003657 6.6e-22 107.8 135 51.1
C02p04280 Brassica napus HOM05D000042 ORTHO05D003657 8.6e-22 107.5 137 50.4
Thhalv10014726m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 1.1e-21 107.1 139 50.4
Aa31LG1G16900 Aethionema arabicum HOM05D000042 ORTHO05D003657 1.5e-21 106.7 88 60.2
BcaB01g05547 Brassica carinata HOM05D000042 ORTHO05D003657 1.5e-21 106.7 138 50.0
CARHR203150 Cardamine hirsuta HOM05D000042 ORTHO05D003657 1.5e-21 106.7 102 55.9
C03p04920 Brassica napus HOM05D000042 ORTHO05D003657 1.9e-21 106.3 138 49.3
BraA02t09289Z Brassica rapa HOM05D000042 ORTHO05D003657 2.5e-21 105.9 121 58.7
BolC3t13023H Brassica oleracea HOM05D000042 ORTHO05D003657 4.3e-21 105.1 138 48.6
BcaC03g13297 Brassica carinata HOM05D000042 ORTHO05D003657 2.1e-20 102.8 138 49.3
BcaC03g18299 Brassica carinata HOM05D000042 ORTHO05D003657 8.0e-20 100.9 87 64.4
A03p04430 Brassica napus HOM05D000042 ORTHO05D003657 4.0e-19 98.6 138 46.4
BraA03t09788Z Brassica rapa HOM05D000042 ORTHO05D003657 4.0e-19 98.6 138 46.4
BcaB02g09858 Brassica carinata HOM05D000042 ORTHO05D003657 4.4e-18 95.1 138 44.2
Sp6g33260 Schrenkiella parvula HOM05D000042 ORTHO05D003657 4.4e-18 95.1 172 42.4
BcaNung06584 Brassica carinata HOM05D000042 ORTHO05D003657 6.4e-17 91.3 143 46.2
BcaC04g19336 Brassica carinata HOM05D000042 ORTHO05D003657 5.4e-16 88.2 139 46.0
Duzib251G0403 Durio zibethinus HOM05D000042 ORTHO05D003657 3.5e-15 85.5 141 46.1
C03p19690 Brassica napus HOM05D000042 ORTHO05D003657 1.0e-14 84.0 80 57.5
Thecc.02G204500 Theobroma cacao HOM05D010221 ORTHO05D003657 1.0e-14 84.0 140 45.7
CARHR278970 Cardamine hirsuta HOM05D000042 ORTHO05D003657 3.9e-14 82.0 61 73.8
THA.LOC104819303 Tarenaya hassleriana HOM05D000042 ORTHO05D003657 8.6e-14 80.9 102 50.0
THA.LOC104799088 Tarenaya hassleriana HOM05D000042 ORTHO05D003657 7.3e-13 77.8 138 42.0
Eucgr.B03511 Eucalyptus grandis HOM05D010221 ORTHO05D003657 1.2e-12 77.0 143 38.5
THA.LOC104799064 Tarenaya hassleriana HOM05D000042 ORTHO05D003657 1.2e-12 77.0 141 41.1
QL03p052074 Quercus lobata HOM05D010221 ORTHO05D003657 4.0e-11 72.0 153 37.9
Atru.chr11.2347 Acer truncatum HOM05D000042 ORTHO05D003657 6.8e-11 71.2 108 45.4
Cfa009378 Carpinus fangiana HOM05D000042 ORTHO05D003657 3.4e-10 68.9 141 37.6
BcaC01g06037 Brassica carinata HOM05D000042 ORTHO05D003657 5.8e-10 68.2 69 56.5
CAN.G683.2 Capsicum annuum HOM05D000042 ORTHO05D003657 5.8e-10 68.2 114 39.5
PGR102G1466 Punica granatum HOM05D000042 ORTHO05D003657 7.5e-10 67.8 143 38.5
Nitab4.5_0001113g0020 Nicotiana tabacum HOM05D010014 ORTHO05D003657 2.2e-09 66.2 94 41.5
Hma1.2p1_0065F.1_g035210 Hydrangea macrophylla HOM05D000042 ORTHO05D003657 2.9e-09 65.9 115 39.1
CAN.G683.7 Capsicum annuum HOM05D000042 ORTHO05D003657 8.3e-09 64.3 109 39.4
Peaxi162Scf00023g02811 Petunia axillaris HOM05D010014 ORTHO05D003657 1.4e-08 63.5 106 37.7
Carub.0008s2589 Capsella rubella HOM05D000042 ORTHO05D003657 3.2e-08 62.4 39 76.9
Peaxi162Scf00023g02913 Petunia axillaris HOM05D000042 ORTHO05D003657 3.2e-08 62.4 90 42.2
BolC3t18370H Brassica oleracea HOM05D010344 ORTHO05D012631 4.1e-08 62.0 96 42.7
Peaxi162Scf00128g01416 Petunia axillaris HOM05D010014 ORTHO05D003657 5.4e-08 61.6 107 35.5
Sopen05g011210 Solanum pennellii HOM05D000006 ORTHO05D000695 9.2e-08 60.8 123 37.4
Migut.G00778 Erythranthe guttata HOM05D000042 ORTHO05D003657 1.2e-07 60.5 99 39.4
Solyc05g015720.2 Solanum lycopersicum HOM05D010014 ORTHO05D003657 3.5e-07 58.9 98 37.8
Sopen12g029840 Solanum pennellii HOM05D000042 ORTHO05D003657 3.5e-07 58.9 113 37.2
AL8G42560 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 4.6e-07 58.5 39 74.4
Eucgr.H04618 Eucalyptus grandis HOM05D000042 ORTHO05D003657 4.6e-07 58.5 108 38.0
Nitab4.5_0012816g0020 Nicotiana tabacum HOM05D000042 ORTHO05D003657 4.6e-07 58.5 139 33.8
CAN.G683.10 Capsicum annuum HOM05D010014 ORTHO05D003657 6.0e-07 58.2 99 39.4
Solyc12g087830.2 Solanum lycopersicum HOM05D000042 ORTHO05D003657 6.0e-07 58.2 110 36.4
Cc11_g17100 Coffea canephora HOM05D000042 ORTHO05D003657 1.0e-06 57.4 115 38.3
Actinidia08058 Actinidia chinensis HOM05D000042 ORTHO05D003657 1.3e-06 57.0 114 37.7
Cfa019366 Carpinus fangiana HOM05D000042 ORTHO05D000028 1.7e-06 56.6 144 34.0
Migut.K00964 Erythranthe guttata HOM05D000042 ORTHO05D003657 1.7e-06 56.6 99 36.4
Migut.K00994 Erythranthe guttata HOM05D000042 ORTHO05D003657 3.0e-06 55.8 99 37.4
Solyc12g087810.3 Solanum lycopersicum HOM05D010014 ORTHO05D003657 3.9e-06 55.5 110 36.4
Gohir.D03G097900 Gossypium hirsutum HOM05D000042 ORTHO05D000028 5.1e-06 55.1 121 34.7
Gorai.003G103000 Gossypium raimondii HOM05D000042 ORTHO05D000028 5.1e-06 55.1 121 34.7
Potri.001G058200 Populus trichocarpa HOM05D000042 ORTHO05D003657 5.1e-06 55.1 114 36.0
Carub.0008s2590 Capsella rubella HOM05D000042 ORTHO05D003657 6.6e-06 54.7 62 59.7
Nitab4.5_0003248g0010 Nicotiana tabacum HOM05D000042 ORTHO05D003657 6.6e-06 54.7 76 44.7
CiPaw.12G009900 Carya illinoinensis HOM05D000042 ORTHO05D000028 8.6e-06 54.3 120 37.5
HanXRQChr12g0375471 Helianthus annuus HOM05D000042 ORTHO05D003657 8.6e-06 54.3 110 37.3
Nitab4.5_0001997g0140 Nicotiana tabacum HOM05D010014 ORTHO05D003657 8.6e-06 54.3 102 37.3


User provided reference genes

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