Gene: AT5G65080

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G65080
  • Transcript Identifier AT5G65080.3
  • Gene Type Coding gene
  • Location Chr5 : 25997650-26002211 : positive

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G65080.3
  • symbol MAF5
  • Alias AGL68,AGAMOUS-like 68
  • full_name MADS AFFECTING FLOWERING 5
  • uniprot Q683D7

Descriptions

  • Description K-box region/MADS-box transcription factor family protein
  • Computational description MADS AFFECTING FLOWERING 5 (MAF5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: negative regulation of flower development, vernalization response; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G65070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010582
IBA
Gene Ontologyfloral meristem determinacy1
GO:0045944
ISO
PLAZA Homology (enrichment)positive regulation of transcription by RNA polymerase II HOM05D000042
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009908
IEA
GOA Databaseflower development
GO:0009910
IMP
IBA
Gene Ontologynegative regulation of flower development1 2
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1
GO:2000028
IGI
Gene Ontologyregulation of photoperiodism, flowering3
GO:0048587
IGI
Gene Ontologyregulation of short-day photoperiodism, flowering4
GO:0010048
IEP
Gene Ontologyvernalization response2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000977
ISO
PLAZA Homology (enrichment)RNA polymerase II transcription regulatory region sequence-specific DNA binding HOM05D000042
GO:0003700
ISS
IEA
Gene OntologyDNA-binding transcription factor activity5
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding1
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036879 Transcription factor, MADS-box superfamily
IPR002100 Transcription factor, MADS-box
IPR002487 Transcription factor, K-box
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)