Gene: Sp2g28150
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier Sp2g28150
- Transcript Identifier Sp2g28150.1
- Gene Type Coding gene
- Location ch2-4 : 8673959-8677270 : positive
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D003657
- #Genes/#Species 211/55
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Sp2g28150.v2.2
- pacid 45089992
Descriptions
- Description PTHR11945//PTHR11945:SF221 - MADS BOX PROTEIN // SERUM RESPONSE FACTOR
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048573 | ISO | PLAZA Integrative Orthology | photoperiodism, flowering | AT1G77080 |
| GO:0010048 | ISO | PLAZA Integrative Orthology | vernalization response | AT5G65080 |
| GO:0010221 | ISO | PLAZA Integrative Orthology | negative regulation of vernalization response | AT5G65050 |
| GO:2000028 | ISO | PLAZA Integrative Orthology | regulation of photoperiodism, flowering | AT5G65080 |
| GO:0048587 | ISO | PLAZA Integrative Orthology | regulation of short-day photoperiodism, flowering | AT5G65080 |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT1G77080 |
| GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT5G65080 |
| GO:0045944 | ISO | PLAZA Homology (enrichment) | positive regulation of transcription by RNA polymerase II | HOM05D000042 |
| GO:0042752 | ISO | PLAZA Integrative Orthology | regulation of circadian rhythm | AT5G10140 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT5G65050 |
| GO:0009266 | ISO | PLAZA Integrative Orthology | response to temperature stimulus | AT5G10140 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G77080 |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT5G65050 |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G65070 |
| GO:0000977 | ISO | PLAZA Homology (enrichment) | RNA polymerase II transcription regulatory region sequence-specific DNA binding | HOM05D000042 |
| GO:0046983 | IEA | InterPro | protein dimerization activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032991 | ISO | PLAZA Integrative Orthology | protein-containing complex | AT5G10140 |
| GO:0005634 | ISO | PLAZA Homology (enrichment) | nucleus | HOM05D000042 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |