Gene: AL6G20600
General Information
Structural Information
- Species Arabidopsis lyrata
- Gene Identifier AL6G20600
- Transcript Identifier AL6G20600.t1
- Gene Type Coding gene
- Location scaffold_6 : 4017298-4023325 : negative
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D003657
- #Genes/#Species 211/55
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id AL6G20600.v2.1
- pacid 35928330
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
| GO:0009266 | ISO | PLAZA Integrative Orthology | response to temperature stimulus | AT5G10140 |
| GO:0042752 | ISO | PLAZA Integrative Orthology | regulation of circadian rhythm | AT5G10140 |
| GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT5G10140 |
| GO:0010048 | ISO | PLAZA Integrative Orthology | vernalization response | AT5G10140 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G10140 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G10140 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0032991 | ISO | PLAZA Integrative Orthology | protein-containing complex | AT5G10140 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |