Gene: PGR102G1466

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR102G1466
  • Transcript Identifier PGR102G1466.01
  • Gene Type Coding gene
  • Location NC_045129.1 : 34984013-35000688 : positive

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031386029.1
  • name LOC116199707
  • name XM_031530169.1
  • id gene-LOC116199707
  • uniprot A0A218XYR2

Descriptions

  • product MADS-box protein FLOWERING LOCUS C-like, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010048
ISO
PLAZA Integrative Orthologyvernalization response AT5G65080
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT5G65080
GO:0010221
ISO
PLAZA Integrative Orthologynegative regulation of vernalization response AT5G65050
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT5G65080
GO:0042752
ISO
PLAZA Integrative Orthologyregulation of circadian rhythm AT5G10140
GO:0048587
ISO
PLAZA Integrative Orthologyregulation of short-day photoperiodism, flowering AT5G65080
GO:0009266
ISO
PLAZA Integrative Orthologyresponse to temperature stimulus AT5G10140
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT1G77080
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT1G77080
GO:0045944
IEA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G65070
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G77080
GO:0000977
IEA
GOA DatabaseRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT5G10140
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033896 MADS MEF2-like
IPR036879 Transcription factor, MADS-box superfamily
IPR002487 Transcription factor, K-box
IPR002100 Transcription factor, MADS-box
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)