Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p63760 Brassica napus HOM05D000042 ORTHO05D003657 2.8e-62 241.9 134 100.0
BolC2t12443H Brassica oleracea HOM05D000042 ORTHO05D003657 1.1e-42 176.8 135 77.8
Thhalv10004949m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 1.2e-39 166.8 138 73.2
Sp2g28150 Schrenkiella parvula HOM05D000042 ORTHO05D003657 5.7e-39 164.5 138 72.5
BraA02t09290Z Brassica rapa HOM05D000042 ORTHO05D003657 2.2e-38 162.5 105 90.5
BcaC03g18301 Brassica carinata HOM05D000042 ORTHO05D003657 1.8e-37 159.5 138 71.7
CARHR278980 Cardamine hirsuta HOM05D000042 ORTHO05D003657 5.4e-37 157.9 139 70.5
A02p43670 Brassica napus HOM05D000042 ORTHO05D003657 2.0e-36 156.0 138 69.6
C02p63770 Brassica napus HOM05D000042 ORTHO05D003657 3.5e-36 155.2 138 70.3
BcaB07g29773 Brassica carinata HOM05D000042 ORTHO05D003657 3.9e-35 151.8 138 68.8
CARHR278990 Cardamine hirsuta HOM05D000042 ORTHO05D003657 1.5e-34 149.8 140 67.9
AL8G42580 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.9e-34 149.4 139 68.3
AT5G65070 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 3.6e-33 145.2 139 66.2
C03p61060 Brassica napus HOM05D000042 ORTHO05D003657 4.0e-32 141.7 139 65.5
BolC3t18368H Brassica oleracea HOM05D000042 ORTHO05D003657 4.0e-32 141.7 139 65.5
BraA02t09291Z Brassica rapa HOM05D000042 ORTHO05D003657 8.9e-32 140.6 170 57.1
BcaB07g29772 Brassica carinata HOM05D000042 ORTHO05D003657 2.0e-31 139.4 138 65.2
A06p31890 Brassica napus HOM05D000042 ORTHO05D003657 1.7e-30 136.3 140 64.3
Carub.0002s2396 Capsella rubella HOM05D000042 ORTHO05D003657 2.9e-30 135.6 138 63.8
AL2G37250 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.4e-29 133.3 138 63.0
AL233U10010 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.0e-27 127.1 138 60.9
BraA06t26122Z Brassica rapa HOM05D000042 ORTHO05D003657 2.3e-27 125.9 170 52.9
Carub.0008s2591 Capsella rubella HOM05D000042 ORTHO05D003657 3.0e-27 125.6 138 59.4
A06p31880 Brassica napus HOM05D000042 ORTHO05D003657 3.9e-27 125.2 138 58.0
C02p63750 Brassica napus HOM05D000042 ORTHO05D003657 4.3e-26 121.7 139 59.7
Aa31LG1G16890 Aethionema arabicum HOM05D000042 ORTHO05D003657 1.2e-25 120.2 135 52.6
BolC2t12438H Brassica oleracea HOM05D000042 ORTHO05D003657 1.2e-25 120.2 139 59.0
BcaB07g29771 Brassica carinata HOM05D000042 ORTHO05D003657 3.6e-25 118.6 139 57.6
BcaC03g18294 Brassica carinata HOM05D000042 ORTHO05D003657 4.7e-25 118.2 139 58.3
C02p63700 Brassica napus HOM05D000042 ORTHO05D003657 4.7e-25 118.2 139 58.3
AT5G65060 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 2.3e-24 115.9 104 68.3
AT5G65080 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 3.1e-24 115.5 139 56.8
A02p43650 Brassica napus HOM05D000042 ORTHO05D003657 1.2e-23 113.6 107 65.4
AT5G65050 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 9.8e-23 110.5 137 58.4
Thhalv10005413m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 4.9e-22 108.2 138 51.4
AT1G77080 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 2.4e-21 105.9 130 53.8
BolC2t12446H Brassica oleracea HOM05D000042 ORTHO05D003657 7.1e-21 104.4 149 54.4
Sp2g28130 Schrenkiella parvula HOM05D000042 ORTHO05D003657 1.6e-20 103.2 111 61.3
BcaC01g02737 Brassica carinata HOM05D000042 ORTHO05D003657 3.5e-20 102.1 143 49.7
A03p16730 Brassica napus HOM05D000042 ORTHO05D003657 1.7e-19 99.8 141 49.6
BraA03t10958Z Brassica rapa HOM05D000042 ORTHO05D003657 1.7e-19 99.8 141 49.6
Carub.0006s0860 Capsella rubella HOM05D000042 ORTHO05D003657 2.3e-19 99.4 136 50.7
BraA02t09289Z Brassica rapa HOM05D000042 ORTHO05D003657 3.9e-19 98.6 120 58.3
AL6G20600 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 6.6e-19 97.8 134 48.5
AL6G20630 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.1e-18 97.1 136 48.5
Carub.0008s2592 Capsella rubella HOM05D000042 ORTHO05D003657 1.5e-18 96.7 138 52.2
A10p27400 Brassica napus HOM05D000042 ORTHO05D003657 2.5e-18 95.9 137 51.8
BraA10t44790Z Brassica rapa HOM05D000042 ORTHO05D003657 9.5e-18 94.0 136 51.5
BolC9t59500H Brassica oleracea HOM05D000042 ORTHO05D003657 1.2e-17 93.6 136 50.7
BolC9t59496H Brassica oleracea HOM05D000042 ORTHO05D003657 1.6e-17 93.2 133 51.1
Thhalv10014726m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 1.6e-17 93.2 133 47.4
C09p67350 Brassica napus HOM05D000042 ORTHO05D003657 2.1e-17 92.8 137 51.1
C09p67380 Brassica napus HOM05D000042 ORTHO05D003657 2.1e-17 92.8 137 51.1
BolC9t59501H Brassica oleracea HOM05D000042 ORTHO05D003657 2.1e-17 92.8 137 51.1
BcaC04g19334 Brassica carinata HOM05D000042 ORTHO05D003657 2.8e-17 92.4 112 55.4
BcaC04g19339 Brassica carinata HOM05D000042 ORTHO05D003657 2.8e-17 92.4 136 50.0
AT5G10140 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 3.6e-17 92.0 136 47.1
BcaB01g05547 Brassica carinata HOM05D000042 ORTHO05D003657 3.6e-17 92.0 140 51.4
BcaC04g19338 Brassica carinata HOM05D000042 ORTHO05D003657 3.6e-17 92.0 112 55.4
C09p67320 Brassica napus HOM05D000042 ORTHO05D003657 3.6e-17 92.0 133 51.1
BolC3t14347H Brassica oleracea HOM05D000042 ORTHO05D003657 3.6e-17 92.0 138 47.8
BcaB08g37135 Brassica carinata HOM05D000042 ORTHO05D003657 1.8e-16 89.7 137 49.6
A02p00340 Brassica napus HOM05D000042 ORTHO05D003657 4.0e-16 88.6 134 50.0
BcaB01g04138 Brassica carinata HOM05D000042 ORTHO05D003657 6.8e-16 87.8 137 46.0
CARHR203150 Cardamine hirsuta HOM05D000042 ORTHO05D003657 6.8e-16 87.8 136 48.5
BcaB02g09859 Brassica carinata HOM05D000042 ORTHO05D003657 1.2e-15 87.0 108 57.4
Aa31LG1G16900 Aethionema arabicum HOM05D000042 ORTHO05D003657 1.5e-15 86.7 88 55.7
C02p04280 Brassica napus HOM05D000042 ORTHO05D003657 2.0e-15 86.3 134 48.5
C03p04920 Brassica napus HOM05D000042 ORTHO05D003657 2.0e-15 86.3 137 49.6
BraA02t05019Z Brassica rapa HOM05D000042 ORTHO05D003657 2.6e-15 85.9 131 49.6
BolC3t13023H Brassica oleracea HOM05D000042 ORTHO05D003657 4.4e-15 85.1 137 48.9
A03p04430 Brassica napus HOM05D000042 ORTHO05D003657 2.2e-14 82.8 137 48.2
BraA03t09788Z Brassica rapa HOM05D000042 ORTHO05D003657 2.2e-14 82.8 137 48.2
BcaC03g18299 Brassica carinata HOM05D000042 ORTHO05D003657 2.9e-14 82.4 87 59.8
BcaC03g13297 Brassica carinata HOM05D000042 ORTHO05D003657 4.9e-14 81.6 135 48.1
CARHR278970 Cardamine hirsuta HOM05D000042 ORTHO05D003657 8.4e-14 80.9 61 73.8
BcaB02g09858 Brassica carinata HOM05D000042 ORTHO05D003657 2.4e-13 79.3 138 44.9
BcaC04g19336 Brassica carinata HOM05D000042 ORTHO05D003657 2.4e-13 79.3 132 44.7
THA.LOC104819303 Tarenaya hassleriana HOM05D000042 ORTHO05D003657 9.2e-13 77.4 139 47.5
Thecc.02G204500 Theobroma cacao HOM05D010221 ORTHO05D003657 4.6e-12 75.1 137 43.8
Sp6g33260 Schrenkiella parvula HOM05D000042 ORTHO05D003657 6.0e-12 74.7 172 41.9
Duzib251G0403 Durio zibethinus HOM05D000042 ORTHO05D003657 5.1e-11 71.6 137 42.3
THA.LOC104799088 Tarenaya hassleriana HOM05D000042 ORTHO05D003657 5.1e-11 71.6 138 45.7
BcaNung06584 Brassica carinata HOM05D000042 ORTHO05D003657 6.6e-11 71.2 140 45.0
THA.LOC104799064 Tarenaya hassleriana HOM05D000042 ORTHO05D003657 8.6e-11 70.9 142 43.0
Eucgr.B03511 Eucalyptus grandis HOM05D010221 ORTHO05D003657 1.4e-08 63.5 114 39.5
QL03p052074 Quercus lobata HOM05D010221 ORTHO05D003657 1.4e-08 63.5 150 38.0
Carub.0008s2590 Capsella rubella HOM05D000042 ORTHO05D003657 2.4e-08 62.8 62 64.5
Nitab4.5_0001113g0020 Nicotiana tabacum HOM05D010014 ORTHO05D003657 2.4e-08 62.8 91 46.2
PGR102G1466 Punica granatum HOM05D000042 ORTHO05D003657 5.2e-08 61.6 141 37.6
Aa31LG1G16910 Aethionema arabicum HOM05D000042 ORTHO05D003657 8.9e-08 60.8 61 57.4
C03p19690 Brassica napus HOM05D000042 ORTHO05D003657 1.2e-07 60.5 120 41.7
Peaxi162Scf00023g02913 Petunia axillaris HOM05D000042 ORTHO05D003657 1.5e-07 60.1 115 41.7
Cfa009378 Carpinus fangiana HOM05D000042 ORTHO05D003657 2.0e-07 59.7 146 37.0
BcaC01g06037 Brassica carinata HOM05D000042 ORTHO05D003657 9.9e-07 57.4 68 50.0
Peaxi162Scf00023g02811 Petunia axillaris HOM05D010014 ORTHO05D003657 9.9e-07 57.4 75 48.0
Peaxi162Scf00128g01416 Petunia axillaris HOM05D010014 ORTHO05D003657 9.9e-07 57.4 94 39.4
CAN.G683.7 Capsicum annuum HOM05D000042 ORTHO05D003657 1.7e-06 56.6 109 36.7
C03p61070 Brassica napus HOM05D060836 ORTHO05D003657 3.8e-06 55.5 49 65.3
BolC3t18370H Brassica oleracea HOM05D010344 ORTHO05D012631 3.8e-06 55.5 97 43.3
Cfa019366 Carpinus fangiana HOM05D000042 ORTHO05D000028 3.8e-06 55.5 141 34.0
Nitab4.5_0003248g0010 Nicotiana tabacum HOM05D000042 ORTHO05D003657 3.8e-06 55.5 89 42.7
CAN.G683.2 Capsicum annuum HOM05D000042 ORTHO05D003657 6.4e-06 54.7 115 35.7


User provided reference genes

Program Settings