Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02754 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 0.0e+00 1083.2 527 100.0
Aqoxy2G03481_Aqoxy2G03482 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 3.0e-224 781.9 526 75.7
PSO541G4585 Papaver somniferum HOM05D003786 ORTHO05D004375 6.7e-107 392.1 543 45.1
COL.COLO4_25255 Corchorus olitorius HOM05D003786 ORTHO05D004375 1.9e-77 294.3 239 58.6
Gohir.D13G002900 Gossypium hirsutum HOM05D003786 ORTHO05D004375 3.6e-76 290.0 235 58.3
Thecc.09G261300 Theobroma cacao HOM05D003786 ORTHO05D004375 3.0e-75 287.0 239 56.1
TAR369G0701 Trochodendron aralioides HOM05D003786 ORTHO05D004375 5.1e-75 286.2 239 57.7
Gorai.013G002800 Gossypium raimondii HOM05D003786 ORTHO05D004375 2.2e-73 280.8 233 57.5
DCAR_006378 Daucus carota HOM05D003786 ORTHO05D004375 2.8e-73 280.4 239 56.9
Dinv01513 Davidia involucrata HOM05D003786 ORTHO05D004375 8.2e-73 278.9 239 57.3
Ciclev10029956m.g Citrus clementina HOM05D003786 ORTHO05D004375 2.4e-72 277.3 238 57.1
Duzib168G0697 Durio zibethinus HOM05D003786 ORTHO05D004375 3.1e-72 276.9 239 54.4
Atru.chr3.3714 Acer truncatum HOM05D003786 ORTHO05D004375 4.1e-72 276.6 239 56.5
MSTRG.858 Avicennia marina HOM05D003786 ORTHO05D004375 5.3e-72 276.2 233 56.2
Actinidia09138 Actinidia chinensis HOM05D003786 ORTHO05D004375 9.1e-72 275.4 236 56.4
Rhsim13G0091500 Rhododendron simsii HOM05D003786 ORTHO05D004375 1.2e-71 275.0 236 56.4
Cpa.g.sc318.5 Carica papaya HOM05D003786 ORTHO05D004375 1.5e-71 274.6 237 55.3
Potri.009G131500 Populus trichocarpa HOM05D003786 ORTHO05D004375 1.5e-71 274.6 235 57.4
CSS0041475 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 2.6e-71 273.9 239 55.6
DCAR_006383 Daucus carota HOM05D003786 ORTHO05D004375 3.5e-71 273.5 239 56.1
CSS0045889 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 4.5e-71 273.1 237 55.3
Manes.11G140700 Manihot esculenta HOM05D003786 ORTHO05D004375 5.9e-71 272.7 237 56.5
Sabra09G0101900 Salix brachista HOM05D003786 ORTHO05D004375 5.9e-71 272.7 235 57.0
Rhsim13G0091800 Rhododendron simsii HOM05D003786 ORTHO05D004375 7.7e-71 272.3 241 54.8
Gohir.A13G003000 Gossypium hirsutum HOM05D003786 ORTHO05D004375 1.0e-70 271.9 233 55.8
Manes.04G025700 Manihot esculenta HOM05D003786 ORTHO05D004375 1.7e-70 271.2 234 56.8
Sabra09G0099700 Salix brachista HOM05D003786 ORTHO05D004375 2.9e-70 270.4 235 56.6
TWI31G1207 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 2.9e-70 270.4 240 55.0
RcHm_v2.0_Chr3g0449171 Rosa chinensis HOM05D003786 ORTHO05D004375 3.8e-70 270.0 241 55.2
PGR102G2306 Punica granatum HOM05D003786 ORTHO05D004375 6.5e-70 269.2 239 54.0
THA.LOC104810009 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 1.1e-69 268.5 239 55.2
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 7.2e-69 265.8 250 54.4
vmacro03165 Vaccinium macrocarpon HOM05D003786 ORTHO05D004375 7.2e-69 265.8 236 53.8
Eucgr.J01130 Eucalyptus grandis HOM05D003786 ORTHO05D004375 9.4e-69 265.4 232 54.7
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 9.4e-69 265.4 239 55.2
FvH4_6g01503 Fragaria vesca HOM05D003786 ORTHO05D004375 1.2e-68 265.0 239 55.2
CANSAT54G0858 Cannabis sativa HOM05D003786 ORTHO05D004375 2.7e-68 263.8 244 50.8
THA.LOC104799484 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 2.7e-68 263.8 235 54.5
Cc00_g24070 Coffea canephora HOM05D003786 ORTHO05D004375 3.6e-68 263.5 237 54.4
Haze_20932 Corylus avellana HOM05D003786 ORTHO05D004375 4.7e-68 263.1 239 55.6
SalBow3G3536 Salvia bowleyana HOM05D003786 ORTHO05D004375 4.7e-68 263.1 236 53.4
Nn2g10664 Nelumbo nucifera HOM05D003786 ORTHO05D004375 8.0e-68 262.3 238 55.9
HanXRQChr12g0373371 Helianthus annuus HOM05D003786 ORTHO05D004375 1.0e-67 261.9 272 49.6
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.8e-67 261.2 239 54.0
QL01p036748 Quercus lobata HOM05D003786 ORTHO05D004375 2.3e-67 260.8 232 54.7
FAN02G2859 Fragaria x ananassa HOM05D003786 ORTHO05D004375 3.0e-67 260.4 239 55.2
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 3.0e-67 260.4 239 54.0
Lsat_1_v5_gn_2_25701 Lactuca sativa HOM05D003786 ORTHO05D004375 4.0e-67 260.0 253 52.2
Sc06g0010590 Simmondsia chinensis HOM05D003786 ORTHO05D004375 6.7e-67 259.2 235 54.5
MBI03_g28482_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 1.1e-66 258.5 237 51.5
PGSC0003DMG400007497 Solanum tuberosum HOM05D003786 ORTHO05D004375 1.1e-66 258.5 232 54.3
MBI04_g27239_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 1.5e-66 258.1 237 52.3
CiPaw.14G077400 Carya illinoinensis HOM05D003786 ORTHO05D004375 2.0e-66 257.7 241 53.1
Haze_23937 Corylus avellana HOM05D003786 ORTHO05D004375 2.0e-66 257.7 239 55.2
FAN05G4299 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.0e-66 257.7 239 53.6
Glyma.10G072100 Glycine max HOM05D003786 ORTHO05D004375 2.6e-66 257.3 239 54.8
Lj2P1038T21 Lonicera japonica HOM05D003786 ORTHO05D004375 7.5e-66 255.8 240 52.9
Nitab4.5_0000106g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 7.5e-66 255.8 235 51.9
Psat6g109040 Pisum sativum HOM05D003786 ORTHO05D004375 9.7e-66 255.4 242 52.9
Migut.I00230 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.3e-65 255.0 235 53.2
Solyc06g075350.3 Solanum lycopersicum HOM05D003786 ORTHO05D004375 1.3e-65 255.0 232 53.4
Sopen06g031770 Solanum pennellii HOM05D003786 ORTHO05D004375 1.7e-65 254.6 232 53.4
Migut.D02178 Erythranthe guttata HOM05D003786 ORTHO05D004375 4.8e-65 253.1 235 53.2
Phvul.001G137825 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 4.8e-65 253.1 237 54.9
ClCG02G020870 Citrullus lanatus HOM05D003786 ORTHO05D004375 8.2e-65 252.3 235 54.0
Phvul.001G138100 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 8.2e-65 252.3 235 54.9
VMungo1127G2311 Vigna mungo HOM05D003786 ORTHO05D004375 1.4e-64 251.5 255 52.9
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 1.8e-64 251.1 246 50.4
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.8e-64 251.1 246 50.4
CAN.G1001.9 Capsicum annuum HOM05D003786 ORTHO05D004375 2.4e-64 250.8 237 51.5
CSS0017411 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 4.1e-64 250.0 238 52.9
CAN.G1001.22 Capsicum annuum HOM05D003786 ORTHO05D004375 4.1e-64 250.0 235 50.6
TPR.G4813 Trifolium pratense HOM05D003786 ORTHO05D004375 4.1e-64 250.0 238 53.8
Ca_08491_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 5.3e-64 249.6 239 53.1
Ca_30036_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 5.3e-64 249.6 239 53.1
unitig_736.g22421 Utricularia gibba HOM05D003786 ORTHO05D004375 5.3e-64 249.6 239 51.5
Medtr7g092500 Medicago truncatula HOM05D003786 ORTHO05D004375 1.2e-63 248.4 240 52.9
Psat3g070480 Pisum sativum HOM05D003786 ORTHO05D004375 1.6e-63 248.1 238 52.5
Lsat_1_v5_gn_6_69540 Lactuca sativa HOM05D003786 ORTHO05D004375 2.6e-63 247.3 254 50.4
SHI14981 Sapria himalayana HOM05D003786 ORTHO05D004375 3.5e-63 246.9 241 49.8
ATR0763G039 Amborella trichopoda HOM05D003786 ORTHO05D004375 7.7e-63 245.7 233 53.6
PGSC0003DMG401003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 7.7e-63 245.7 236 50.4
PGSC0003DMG402003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 7.7e-63 245.7 236 50.4
Actinidia03750 Actinidia chinensis HOM05D003786 ORTHO05D004375 1.0e-62 245.4 248 49.2
Nitab4.5_0005175g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.0e-62 245.4 235 50.6
Glyma.04G189200 Glycine max HOM05D003786 ORTHO05D004375 1.7e-62 244.6 247 53.0
TWI75G0263 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 1.7e-62 244.6 231 52.8
Nitab4.5_0001421g0060 Nicotiana tabacum HOM05D003786 ORTHO05D004375 3.8e-62 243.4 214 55.6
TPR.G28524 Trifolium pratense HOM05D003786 ORTHO05D004375 3.8e-62 243.4 238 52.9
arahy.Tifrunner.gnm1.ann1.2E7PU8 Arachis hypogaea HOM05D003786 ORTHO05D004375 5.0e-62 243.0 242 52.1
CsaV3_6G021540 Cucumis sativus L. HOM05D003786 ORTHO05D004375 6.5e-62 242.7 233 54.1
AUR62042700 Chenopodium quinoa HOM05D003786 ORTHO05D004375 8.5e-62 242.3 235 50.6
AUR62044767 Chenopodium quinoa HOM05D003786 ORTHO05D004375 8.5e-62 242.3 235 50.6
Lj1g0003252 Lotus japonicus HOM05D003786 ORTHO05D004375 1.1e-61 241.9 237 51.9
Prupe.6G093000 Prunus persica HOM05D003786 ORTHO05D004375 1.1e-61 241.9 229 53.3
Lalb_Chr25g0287531 Lupinus albus HOM05D003786 ORTHO05D004375 1.5e-61 241.5 237 51.9
Aa31LG5G20880 Aethionema arabicum HOM05D003786 ORTHO05D004375 1.9e-61 241.1 235 51.5
AUR62040193 Chenopodium quinoa HOM05D003786 ORTHO05D004375 1.9e-61 241.1 235 50.2
arahy.Tifrunner.gnm1.ann1.XC8HKJ Arachis hypogaea HOM05D003786 ORTHO05D004375 9.4e-61 238.8 254 50.4
Peaxi162Scf00072g00045 Petunia axillaris HOM05D003786 ORTHO05D004375 2.1e-60 237.7 236 49.6
AL5G24200 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 8.0e-60 235.7 236 50.8
AT3G45590 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 8.0e-60 235.7 234 49.1
ECA233G5822 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.4e-59 235.0 235 52.3
EL10Ac6g14823 Beta vulgaris HOM05D003786 ORTHO05D004375 4.0e-59 233.4 240 47.9
AUR62019620 Chenopodium quinoa HOM05D003786 ORTHO05D004375 5.2e-59 233.0 235 49.4
SGA_v2.0_scaffold97G29166 Striga asiatica HOM05D003786 ORTHO05D004375 8.8e-59 232.3 229 50.7
AL8G36840 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 1.5e-58 231.5 235 51.1
BcaB01g04647 Brassica carinata HOM05D003786 ORTHO05D004375 1.5e-58 231.5 236 48.3
Aa31LG4G14750 Aethionema arabicum HOM05D003786 ORTHO05D004375 2.0e-58 231.1 228 48.7
HPP92_017618 Vanilla planifolia HOM05D003786 ORTHO05D004375 2.0e-58 231.1 239 49.0
BolC3t13758H Brassica oleracea HOM05D003786 ORTHO05D004375 5.7e-58 229.6 236 50.0
Carub.0008s2097 Capsella rubella HOM05D003786 ORTHO05D004375 7.5e-58 229.2 234 48.7
Ah.12g063340 Amaranthus hybridus HOM05D003786 ORTHO05D004375 9.8e-58 228.8 289 44.3
AT5G60230 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 1.3e-57 228.4 234 47.9
HanXRQChr01g0022711 Helianthus annuus HOM05D003786 ORTHO05D004375 1.7e-57 228.0 240 50.4
A10p17360 Brassica napus HOM05D003786 ORTHO05D004375 2.8e-57 227.3 234 48.3
BraA10t43819Z Brassica rapa HOM05D003786 ORTHO05D004375 2.8e-57 227.3 237 46.4
MD11G1123700 Malus domestica HOM05D003786 ORTHO05D004375 2.8e-57 227.3 214 54.2
GSVIVG01025123001 Vitis vinifera HOM05D003786 ORTHO05D004375 2.8e-57 227.3 231 48.5
Sp6g21860 Schrenkiella parvula HOM05D003786 ORTHO05D004375 3.7e-57 226.9 236 50.4
Thhalv10015366m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 6.3e-57 226.1 241 46.9
Sed0001350 Sechium edule HOM05D003786 ORTHO05D004375 6.3e-57 226.1 232 50.4
Carub.0005s1880 Capsella rubella HOM05D003786 ORTHO05D004375 2.4e-56 224.2 234 47.9
Migut.I00232 Erythranthe guttata HOM05D003786 ORTHO05D004375 2.4e-56 224.2 204 52.5
A03p11270 Brassica napus HOM05D003786 ORTHO05D004375 3.1e-56 223.8 238 46.6
BraA03t10439Z Brassica rapa HOM05D003786 ORTHO05D004375 3.1e-56 223.8 238 46.6
C09p52700 Brassica napus HOM05D003786 ORTHO05D004375 4.1e-56 223.4 343 40.8
BolC9t58138H Brassica oleracea HOM05D003786 ORTHO05D004375 4.1e-56 223.4 343 40.8
Gorai.013G255400 Gossypium raimondii HOM05D003786 ORTHO05D004375 1.6e-55 221.5 235 49.4
Gohir.D13G224600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 2.0e-55 221.1 232 49.6
AUR62039602 Chenopodium quinoa HOM05D003786 ORTHO05D004375 1.0e-54 218.8 216 51.4
SGA_v2.0_scaffold32G12943 Striga asiatica HOM05D003786 ORTHO05D004375 1.0e-54 218.8 231 49.8
Migut.I00250 Erythranthe guttata HOM05D003786 ORTHO05D004375 6.5e-54 216.1 235 48.9
CDE05G0279 Ceratophyllum demersum HOM05D003786 ORTHO05D004375 8.5e-54 215.7 233 48.5
Migut.I00240 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.5e-53 214.9 201 53.2
Ah.08g211230 Amaranthus hybridus HOM05D003786 ORTHO05D004375 1.9e-53 214.5 236 46.6
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 4.2e-53 213.4 190 54.2
SEGI_12201 Sequoiadendron giganteum HOM05D003786 ORTHO05D004375 2.7e-52 210.7 257 45.9
Sabra09G0100500 Salix brachista HOM05D003786 ORTHO05D004375 6.1e-52 209.5 235 47.2
Oeu022264.1 Olea europaea HOM05D003786 ORTHO05D004375 8.0e-52 209.1 221 48.4
MELO3C025739.2 Cucumis melo HOM05D003786 ORTHO05D004375 6.8e-51 206.1 199 53.3
C03p12960 Brassica napus HOM05D003786 ORTHO05D004375 7.5e-50 202.6 211 49.3
Thhalv10002801m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 2.2e-49 201.1 230 44.8
Oeu012677.3 Olea europaea HOM05D003786 ORTHO05D004375 1.4e-48 198.4 233 43.3
Os11g0602400 Oryza sativa ssp. japonica HOM05D003786 ORTHO05D004375 1.4e-48 198.4 241 43.6
PSO675G4257 Papaver somniferum HOM05D003786 ORTHO05D004375 2.4e-48 197.6 224 50.0
RcHm_v2.0_Chr5g0061031 Rosa chinensis HOM05D003786 ORTHO05D004375 2.4e-48 197.6 221 48.0
Peaxi162Scf00272g00092 Petunia axillaris HOM05D003786 ORTHO05D004375 2.0e-47 194.5 235 44.7
Zm00001eb228610 Zea mays HOM05D003786 ORTHO05D004375 6.6e-46 189.5 237 43.0
TAR623G0784 Trochodendron aralioides HOM05D003786 ORTHO05D004375 2.1e-44 184.5 167 59.3
BcaB08g36317 Brassica carinata HOM05D003786 ORTHO05D004375 3.6e-44 183.7 234 41.5
Nitab4.5_0005175g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 3.6e-44 183.7 163 51.5
ECA238G1499 Erigeron canadensis HOM05D003786 ORTHO05D004375 6.1e-44 183.0 234 44.9
Medtr0262s0030 Medicago truncatula HOM05D003786 ORTHO05D004375 9.8e-42 175.6 174 52.9
BolC3t13761H Brassica oleracea HOM05D003786 ORTHO05D004375 5.4e-40 169.9 168 46.4
MD11G1124300 Malus domestica HOM05D003786 ORTHO05D004375 3.5e-39 167.2 145 55.2
Mapoly0072s0108 Marchantia polymorpha HOM05D003786 ORTHO05D004375 3.5e-39 167.2 258 39.5
Nitab4.5_0021870g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.3e-38 164.5 157 51.6
Migut.I00236 Erythranthe guttata HOM05D003786 ORTHO05D004375 5.0e-38 163.3 234 41.5
Pp3c27_2720 Physcomitrium patens HOM05D003786 ORTHO05D004375 8.6e-38 162.5 259 37.5
VMungo0563G0001 Vigna mungo HOM05D003786 ORTHO05D004375 1.3e-33 148.7 205 41.5
Migut.I00245 Erythranthe guttata HOM05D003786 ORTHO05D004375 4.1e-32 143.7 190 41.1
Nitab4.5_0000888g0190 Nicotiana tabacum HOM05D003786 ORTHO05D004375 5.0e-30 136.7 198 40.9
ECA246G5003 Erigeron canadensis HOM05D003786 ORTHO05D004375 1.5e-29 135.2 130 55.4
Glyma.19G143800 Glycine max HOM05D003786 ORTHO05D004375 7.5e-26 122.9 116 55.2
Potri.014G083401 Populus trichocarpa HOM05D003786 ORTHO05D004375 7.5e-26 122.9 100 62.0
Lj1g0020830 Lotus japonicus HOM05D003786 ORTHO05D004375 4.1e-24 117.1 139 45.3
CARHR150050 Cardamine hirsuta HOM05D003786 ORTHO05D004375 2.7e-23 114.4 119 48.7
CBR_g44920 Chara braunii HOM05D003786 ORTHO05D004375 3.3e-21 107.5 164 39.0
Migut.I00242 Erythranthe guttata HOM05D003786 ORTHO05D004375 9.5e-21 105.9 104 47.1
Cre02.g096900 Chlamydomonas reinhardtii HOM05D003786 ORTHO05D004375 6.2e-20 103.2 188 32.4
TAR376G1065 Trochodendron aralioides HOM05D000267 ORTHO05D004375 6.2e-20 103.2 145 38.6
Peaxi162Scf00389g00065 Petunia axillaris HOM05D003786 ORTHO05D004375 1.4e-19 102.1 115 42.6
Gohir.A13G220600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 3.1e-19 100.9 92 52.2
SGA_v2.0_scaffold146G36226 Striga asiatica HOM05D003786 ORTHO05D004375 6.4e-17 93.2 77 50.6
BcaC04g19667 Brassica carinata HOM05D000666 ORTHO05D001727 1.1e-13 82.4 107 38.3
AT3G45577 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 1.9e-13 81.6 98 39.8
Lsat_1_v5_gn_2_25281 Lactuca sativa HOM05D003786 ORTHO05D004375 4.3e-13 80.5 75 54.7
PRCOL_00003701 Prasinoderma coloniale HOM05D003786 ORTHO05D004375 1.1e-11 75.9 158 29.7
Medtr5g031400 Medicago truncatula HOM05D003786 ORTHO05D004375 2.6e-10 71.2 131 32.1
CARHR273910 Cardamine hirsuta HOM05D003786 ORTHO05D004375 9.9e-10 69.3 78 39.7
Cfa023727 Carpinus fangiana HOM05D003786 ORTHO05D004375 2.1e-07 61.6 127 29.9
MCO01G070 Micromonas commoda HOM05D003786 ORTHO05D004375 2.7e-07 61.2 130 30.0


User provided reference genes

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