Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G8980 Aethionema arabicum HOM05D005384 ORTHO05D006477 1.1e-195 686.4 341 100.0
Aa31LG10G6030 Aethionema arabicum HOM05D005384 ORTHO05D006477 2.6e-72 276.6 143 92.3
Carub.0005s2082 Capsella rubella HOM05D005384 ORTHO05D006477 4.5e-64 249.2 143 78.3
CARHR164150 Cardamine hirsuta HOM05D005384 ORTHO05D006477 1.0e-60 238.0 143 77.6
AL5G35270 Arabidopsis lyrata HOM05D005384 ORTHO05D006477 2.2e-58 230.3 143 74.8
Thhalv10010093m.g Eutrema salsugineum HOM05D005384 ORTHO05D006477 4.8e-58 229.2 144 74.3
Sp5g08170 Schrenkiella parvula HOM05D005384 ORTHO05D006477 1.2e-56 224.6 143 75.5
AT3G54230 Arabidopsis thaliana HOM05D005384 ORTHO05D006477 3.8e-55 219.5 131 76.3
A09p47220 Brassica napus HOM05D005384 ORTHO05D006477 1.9e-54 217.2 143 72.7
BraA09t40184Z Brassica rapa HOM05D005384 ORTHO05D006477 1.9e-54 217.2 143 72.7
BcaNung06989 Brassica carinata HOM05D005384 ORTHO05D006477 7.2e-54 215.3 160 67.5
C08p29480 Brassica napus HOM05D005384 ORTHO05D006477 9.4e-54 214.9 143 71.3
BolC8t50551H Brassica oleracea HOM05D005384 ORTHO05D006477 9.4e-54 214.9 143 72.0
THA.LOC104801042 Tarenaya hassleriana HOM05D005384 ORTHO05D006477 2.7e-53 213.4 142 71.1
Cc04_g13050 Coffea canephora HOM05D005384 ORTHO05D006477 7.5e-51 205.3 142 68.3
MSTRG.2272 Avicennia marina HOM05D005384 ORTHO05D006477 9.8e-51 204.9 142 66.2
Solyc08g077310.3 Solanum lycopersicum HOM05D005384 ORTHO05D006477 3.7e-50 203.0 142 66.2
Sopen08g025890 Solanum pennellii HOM05D005384 ORTHO05D006477 3.7e-50 203.0 142 66.2
CAN.G572.37 Capsicum annuum HOM05D005384 ORTHO05D006477 4.8e-50 202.6 142 65.5
Migut.E00282 Erythranthe guttata HOM05D005384 ORTHO05D006477 4.8e-50 202.6 142 65.5
Peaxi162Scf00084g00818 Petunia axillaris HOM05D005384 ORTHO05D006477 4.8e-50 202.6 142 66.2
Cpa.g.sc765.1 Carica papaya HOM05D005384 ORTHO05D006477 8.3e-50 201.8 186 57.5
Gohir.D08G048500 Gossypium hirsutum HOM05D005384 ORTHO05D006477 2.4e-49 200.3 142 66.2
Gorai.004G048000 Gossypium raimondii HOM05D005384 ORTHO05D006477 2.4e-49 200.3 142 66.2
Duzib133G1182 Durio zibethinus HOM05D005384 ORTHO05D006477 9.1e-49 198.4 142 65.5
Rhsim07G0122100 Rhododendron simsii HOM05D005384 ORTHO05D006477 9.1e-49 198.4 144 66.0
Lsat_1_v5_gn_3_16520 Lactuca sativa HOM05D005384 ORTHO05D006477 1.2e-48 198.0 143 66.4
ClCG01G008440 Citrullus lanatus HOM05D005384 ORTHO05D006477 1.6e-48 197.6 142 67.6
CsaV3_5G020310 Cucumis sativus L. HOM05D005384 ORTHO05D006477 2.0e-48 197.2 142 67.6
Sabra04G0054400 Salix brachista HOM05D005384 ORTHO05D006477 4.5e-48 196.1 142 66.9
TAR636G3654 Trochodendron aralioides HOM05D005384 ORTHO05D006477 5.9e-48 195.7 143 66.4
Dinv05843 Davidia involucrata HOM05D005384 ORTHO05D006477 7.7e-48 195.3 142 65.5
Gohir.A08G038300 Gossypium hirsutum HOM05D005384 ORTHO05D006477 7.7e-48 195.3 142 65.5
Oeu024119.2 Olea europaea HOM05D005384 ORTHO05D006477 7.7e-48 195.3 142 64.1
CiPaw.03G076200 Carya illinoinensis HOM05D005384 ORTHO05D006477 1.3e-47 194.5 141 66.0
DCAR_016228 Daucus carota HOM05D005384 ORTHO05D006477 1.3e-47 194.5 143 64.3
Gohir.D12G051100 Gossypium hirsutum HOM05D005384 ORTHO05D006477 1.3e-47 194.5 142 64.8
Gorai.008G054400 Gossypium raimondii HOM05D005384 ORTHO05D006477 1.3e-47 194.5 142 64.8
Sed0018353 Sechium edule HOM05D005384 ORTHO05D006477 1.7e-47 194.1 142 66.9
Hund21526 Selenicereus undatus HOM05D005384 ORTHO05D006477 1.7e-47 194.1 142 66.2
Atru.chr1.2109 Acer truncatum HOM05D005384 ORTHO05D006477 2.2e-47 193.7 142 64.8
CiPaw.04G049200 Carya illinoinensis HOM05D005384 ORTHO05D006477 2.2e-47 193.7 141 65.2
TAR629G1600 Trochodendron aralioides HOM05D005384 ORTHO05D006477 2.2e-47 193.7 143 66.4
Gohir.A12G052600 Gossypium hirsutum HOM05D005384 ORTHO05D006477 2.9e-47 193.4 142 64.8
Potri.004G081800 Populus trichocarpa HOM05D005384 ORTHO05D006477 3.8e-47 193.0 142 66.2
HanXRQChr17g0535751 Helianthus annuus HOM05D005384 ORTHO05D006477 5.0e-47 192.6 143 63.6
GSVIVG01013204001 Vitis vinifera HOM05D005384 ORTHO05D006477 5.0e-47 192.6 142 64.8
COL.COLO4_24446 Corchorus olitorius HOM05D005384 ORTHO05D006477 6.5e-47 192.2 142 64.8
vmacro14142 Vaccinium macrocarpon HOM05D005384 ORTHO05D006477 6.5e-47 192.2 144 65.3
CSS0000239 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 8.5e-47 191.8 142 64.8
CSS0043592 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 8.5e-47 191.8 142 64.8
Ah.14g086470 Amaranthus hybridus HOM05D005384 ORTHO05D006477 1.1e-46 191.4 143 63.6
EL10Ac8g19736 Beta vulgaris HOM05D005384 ORTHO05D006477 1.1e-46 191.4 143 63.6
Manes.02G081900 Manihot esculenta HOM05D005384 ORTHO05D006477 1.5e-46 191.0 142 64.8
Thecc.04G058100 Theobroma cacao HOM05D005384 ORTHO05D006477 1.5e-46 191.0 142 64.1
CDE06G0914 Ceratophyllum demersum HOM05D005384 ORTHO05D006477 1.9e-46 190.7 143 63.6
CDE12G0199 Ceratophyllum demersum HOM05D005384 ORTHO05D006477 1.9e-46 190.7 143 63.6
Eucgr.J01644 Eucalyptus grandis HOM05D005384 ORTHO05D006477 7.2e-46 188.7 142 63.4
Os02g0167500 Oryza sativa ssp. japonica HOM05D005384 ORTHO05D006477 7.2e-46 188.7 147 61.9
Aqoxy3G02532 Aquilegia oxysepala HOM05D005384 ORTHO05D006477 1.6e-45 187.6 143 65.0
QL02p064091 Quercus lobata HOM05D005384 ORTHO05D006477 1.6e-45 187.6 141 62.4
Nitab4.5_0009567g0040 Nicotiana tabacum HOM05D005384 ORTHO05D006477 2.1e-45 187.2 142 62.7
Aqoxy2G03702_Aqoxy2G03703 Aquilegia oxysepala HOM05D005384 ORTHO05D006477 2.8e-45 186.8 142 63.4
CSS0046614 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 2.8e-45 186.8 142 62.7
Nitab4.5_0002055g0100 Nicotiana tabacum HOM05D005384 ORTHO05D006477 2.8e-45 186.8 142 63.4
PSO063G3637 Papaver somniferum HOM05D005384 ORTHO05D006477 3.6e-45 186.4 142 64.8
Sabra17G0113100 Salix brachista HOM05D005384 ORTHO05D006477 3.6e-45 186.4 142 62.7
Ciclev10010959m.g Citrus clementina HOM05D005384 ORTHO05D006477 4.7e-45 186.0 142 62.7
AUR62030216 Chenopodium quinoa HOM05D005384 ORTHO05D006477 6.1e-45 185.7 143 63.6
arahy.Tifrunner.gnm1.ann1.EB4ABC Arachis hypogaea HOM05D005384 ORTHO05D006477 1.4e-44 184.5 142 62.0
arahy.Tifrunner.gnm1.ann1.R6E3N5 Arachis hypogaea HOM05D005384 ORTHO05D006477 1.4e-44 184.5 142 62.0
ATR0743G115 Amborella trichopoda HOM05D005384 ORTHO05D006477 1.8e-44 184.1 142 61.3
Phvul.003G273500 Phaseolus vulgaris HOM05D005384 ORTHO05D006477 3.0e-44 183.3 142 62.0
Potri.017G138500 Populus trichocarpa HOM05D005384 ORTHO05D006477 3.0e-44 183.3 142 62.0
Sabra17G0115200 Salix brachista HOM05D005384 ORTHO05D006477 3.0e-44 183.3 142 62.0
Glyma.08G266700 Glycine max HOM05D005384 ORTHO05D006477 4.0e-44 183.0 142 62.7
SEGI_21581 Sequoiadendron giganteum HOM05D005384 ORTHO05D006477 5.2e-44 182.6 145 60.0
Dinv07851 Davidia involucrata HOM05D005384 ORTHO05D006477 6.8e-44 182.2 144 63.9
FvH4_7g04410 Fragaria vesca HOM05D005384 ORTHO05D006477 8.8e-44 181.8 142 60.6
FAN01G0265 Fragaria x ananassa HOM05D005384 ORTHO05D006477 8.8e-44 181.8 142 60.6
Glyma.16G102300 Glycine max HOM05D005384 ORTHO05D006477 1.2e-43 181.4 142 63.4
Lj3C397G6 Lonicera japonica HOM05D005384 ORTHO05D006477 1.2e-43 181.4 143 62.2
SGA_v2.0_scaffold14G06795 Striga asiatica HOM05D005384 ORTHO05D006477 1.2e-43 181.4 176 53.4
Oeu054547.2 Olea europaea HOM05D005384 ORTHO05D006477 2.0e-43 180.6 142 61.3
Zm00001eb306360 Zea mays HOM05D005384 ORTHO05D006477 2.0e-43 180.6 142 62.0
FAN03G3298 Fragaria x ananassa HOM05D005384 ORTHO05D006477 2.6e-43 180.3 142 59.9
PGR042G2720 Punica granatum HOM05D005384 ORTHO05D006477 2.6e-43 180.3 142 59.2
TPR.G28960 Trifolium pratense HOM05D005384 ORTHO05D006477 2.6e-43 180.3 142 63.4
VMungo0251G2756 Vigna mungo HOM05D005384 ORTHO05D006477 2.6e-43 180.3 142 62.7
RcHm_v2.0_Chr1g0329501 Rosa chinensis HOM05D005384 ORTHO05D006477 3.4e-43 179.9 142 59.9
PSO782G4681 Papaver somniferum HOM05D005384 ORTHO05D006477 4.4e-43 179.5 142 63.4
Psat4g111160 Pisum sativum HOM05D005384 ORTHO05D006477 4.4e-43 179.5 142 62.7
AUR62027521 Chenopodium quinoa HOM05D005384 ORTHO05D006477 5.7e-43 179.1 138 63.0
Sabra17G0116500 Salix brachista HOM05D005384 ORTHO05D006477 5.7e-43 179.1 142 60.6
Actinidia22110 Actinidia chinensis HOM05D005384 ORTHO05D006477 7.5e-43 178.7 141 59.6
FAN10G2966 Fragaria x ananassa HOM05D005384 ORTHO05D006477 9.8e-43 178.3 144 59.0
Lj4g0003244 Lotus japonicus HOM05D005384 ORTHO05D006477 9.8e-43 178.3 142 60.6
Medtr8g070990 Medicago truncatula HOM05D005384 ORTHO05D006477 9.8e-43 178.3 142 62.0
ECA246G0264 Erigeron canadensis HOM05D005384 ORTHO05D006477 1.7e-42 177.6 144 61.8
Lalb_Chr16g0391981 Lupinus albus HOM05D005384 ORTHO05D006477 2.2e-42 177.2 142 59.2
Prupe.2G049800 Prunus persica HOM05D005384 ORTHO05D006477 2.2e-42 177.2 142 59.9
Lalb_Chr05g0228951 Lupinus albus HOM05D005384 ORTHO05D006477 8.3e-42 175.3 142 57.7
Haze_14319 Corylus avellana HOM05D005384 ORTHO05D006477 1.4e-41 174.5 132 62.9
CANSAT25G0269 Cannabis sativa HOM05D005384 ORTHO05D006477 4.1e-41 172.9 142 60.6
Sc22g0001400 Simmondsia chinensis HOM05D005384 ORTHO05D006477 1.2e-40 171.4 143 58.7
Actinidia10880 Actinidia chinensis HOM05D005384 ORTHO05D006477 1.3e-39 167.9 142 59.9
Mapoly0005s0121 Marchantia polymorpha HOM05D005384 ORTHO05D006477 1.7e-39 167.5 146 56.2
MD02G1270000 Malus domestica HOM05D005384 ORTHO05D006477 3.8e-39 166.4 145 55.9
Pp3c10_21700 Physcomitrium patens HOM05D005384 ORTHO05D006477 3.8e-39 166.4 142 55.6
Zm00001eb361710 Zea mays HOM05D005384 ORTHO05D006477 5.0e-39 166.0 142 59.2
MD00G1152000 Malus domestica HOM05D005384 ORTHO05D006477 1.1e-38 164.9 142 57.0
Pp3c20_21810 Physcomitrium patens HOM05D005384 ORTHO05D006477 3.6e-37 159.8 145 51.7
AagrBONN_evm.TU.Sc2ySwM_228.1178 Anthoceros agrestis HOM05D005384 ORTHO05D006477 1.4e-36 157.9 141 53.2
Lj2A247G82 Lonicera japonica HOM05D005384 ORTHO05D006477 1.4e-36 157.9 178 47.8
SMO351G0487 Selaginella moellendorffii HOM05D005384 ORTHO05D006477 4.9e-34 149.4 151 49.7
FAN06G1991 Fragaria x ananassa HOM05D005384 ORTHO05D006477 5.2e-28 129.4 107 58.9
SMO367G0074 Selaginella moellendorffii HOM05D005384 ORTHO05D006477 4.6e-24 116.3 142 40.1
PSO724G0625 Papaver somniferum HOM05D005384 ORTHO05D006477 8.9e-20 102.1 83 57.8
HPP92_022596 Vanilla planifolia HOM05D005384 ORTHO05D006477 6.4e-18 95.9 83 53.0
MELO3C000611.2 Cucumis melo HOM05D005384 ORTHO05D006477 1.0e-15 88.6 73 58.9
unitig_21.g20863 Utricularia gibba HOM05D005384 ORTHO05D006477 2.5e-14 84.0 53 73.6
PSO421G0584 Papaver somniferum HOM05D001342 ORTHO05D006477 4.3e-14 83.2 81 46.9
PSO063G2107 Papaver somniferum HOM05D005384 ORTHO05D006477 1.6e-13 81.3 81 49.4
PSO423G0094 Papaver somniferum HOM05D005384 ORTHO05D006477 2.1e-13 80.9 81 46.9
PSO384G3834 Papaver somniferum HOM05D005384 ORTHO05D006477 3.6e-13 80.1 79 48.1
PSO782G2179 Papaver somniferum HOM05D005384 ORTHO05D006477 4.7e-13 79.7 82 50.0
PSO135G0014 Papaver somniferum HOM05D005384 ORTHO05D006477 6.2e-13 79.3 81 46.9
PSO421G0508 Papaver somniferum HOM05D005384 ORTHO05D006477 8.1e-13 79.0 81 45.7
PSO170G5666 Papaver somniferum HOM05D005384 ORTHO05D006477 2.3e-12 77.4 81 45.7
PSO407G0145 Papaver somniferum HOM05D005384 ORTHO05D006477 3.1e-12 77.0 81 45.7
MBI05_g05611_MAGBIO Magnolia biondii HOM05D001543 ORTHO05D001722 5.6e-06 56.2 65 36.9


User provided reference genes

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