Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035461 Chenopodium quinoa HOM05D005387 ORTHO05D006711 4.7e-158 561.2 301 100.0
AUR62026893 Chenopodium quinoa HOM05D005387 ORTHO05D006711 2.6e-15 87.0 43 97.7
vmacro02566 Vaccinium macrocarpon HOM05D005387 ORTHO05D006711 7.6e-15 85.5 48 85.4
AUR62025818 Chenopodium quinoa HOM05D005387 ORTHO05D006711 1.3e-14 84.7 86 57.0
Hund03003 Selenicereus undatus HOM05D005387 ORTHO05D006711 1.3e-14 84.7 86 57.0
DCAR_002738 Daucus carota HOM05D005387 ORTHO05D006711 2.2e-14 84.0 48 83.3
EL10Ac6g13926 Beta vulgaris HOM05D005387 ORTHO05D006711 2.9e-14 83.6 86 55.8
CSS0042122 Camellia sinensis var. sinensis HOM05D005387 ORTHO05D006711 2.9e-14 83.6 86 55.8
AUR62017677 Chenopodium quinoa HOM05D005387 ORTHO05D006711 2.9e-14 83.6 86 55.8
AUR62034034 Chenopodium quinoa HOM05D005387 ORTHO05D006711 2.9e-14 83.6 86 55.8
AUR62044301 Chenopodium quinoa HOM05D005387 ORTHO05D006711 2.9e-14 83.6 86 55.8
Os05g0144800 Oryza sativa ssp. japonica HOM05D005387 ORTHO05D006711 2.9e-14 83.6 86 55.8
Rhsim13G0024300 Rhododendron simsii HOM05D005387 ORTHO05D006711 2.9e-14 83.6 86 55.8
Sc18g0000660 Simmondsia chinensis HOM05D005387 ORTHO05D006711 3.8e-14 83.2 86 54.7
HanXRQChr10g0282751 Helianthus annuus HOM05D005387 ORTHO05D006711 4.9e-14 82.8 48 81.2
Zm00001eb417930 Zea mays HOM05D005387 ORTHO05D006711 4.9e-14 82.8 86 54.7
Actinidia09142 Actinidia chinensis HOM05D005387 ORTHO05D006711 6.4e-14 82.4 91 52.7
Eucgr.K03375 Eucalyptus grandis HOM05D005387 ORTHO05D006711 6.4e-14 82.4 86 54.7
Mapoly0059s0089 Marchantia polymorpha HOM05D005387 ORTHO05D006711 6.4e-14 82.4 48 83.3
PGR044G0219 Punica granatum HOM05D005387 ORTHO05D006711 6.4e-14 82.4 86 54.7
TAR362G0175 Trochodendron aralioides HOM05D005387 ORTHO05D006711 6.4e-14 82.4 86 53.5
MELO3C015844.2 Cucumis melo HOM05D005387 ORTHO05D006711 8.4e-14 82.0 86 54.7
CsaV3_7G028200 Cucumis sativus L. HOM05D005387 ORTHO05D006711 8.4e-14 82.0 86 54.7
Dinv34746 Davidia involucrata HOM05D005387 ORTHO05D006711 8.4e-14 82.0 86 54.7
Sed0006598 Sechium edule HOM05D005387 ORTHO05D006711 8.4e-14 82.0 86 54.7
Ca_18819_v3 Cicer arietinum L. HOM05D005387 ORTHO05D006711 1.1e-13 81.6 86 54.7
Migut.D00288 Erythranthe guttata HOM05D005387 ORTHO05D006711 1.1e-13 81.6 106 49.1
PSO210G3721 Papaver somniferum HOM05D005387 ORTHO05D006711 1.1e-13 81.6 86 55.8
PSO832G0722 Papaver somniferum HOM05D005387 ORTHO05D006711 1.1e-13 81.6 86 55.8
SMO118G0087 Selaginella moellendorffii HOM05D005387 ORTHO05D006711 1.1e-13 81.6 48 81.2
SGA_v2.0_scaffold1G00463 Striga asiatica HOM05D005387 ORTHO05D006711 1.1e-13 81.6 106 50.0
unitig_0.g111 Utricularia gibba HOM05D005387 ORTHO05D006711 1.1e-13 81.6 48 81.2
GSVIVG01011125001 Vitis vinifera HOM05D005387 ORTHO05D006711 1.1e-13 81.6 86 54.7
arahy.Tifrunner.gnm1.ann1.48M1R9 Arachis hypogaea HOM05D005387 ORTHO05D006711 1.4e-13 81.3 86 54.7
arahy.Tifrunner.gnm1.ann1.4E1RNV Arachis hypogaea HOM05D005387 ORTHO05D006711 1.4e-13 81.3 86 54.7
CDE06G0365 Ceratophyllum demersum HOM05D005387 ORTHO05D006711 1.4e-13 81.3 86 52.3
Nn4g26234 Nelumbo nucifera HOM05D005387 ORTHO05D006711 1.4e-13 81.3 86 52.3
Oeu015966.1 Olea europaea HOM05D005387 ORTHO05D006711 1.4e-13 81.3 106 49.1
AagrBONN_evm.TU.Sc2ySwM_228.154 Anthoceros agrestis HOM05D005387 ORTHO05D006711 1.9e-13 80.9 48 81.2
CANSAT25G2972 Cannabis sativa HOM05D005387 ORTHO05D006711 1.9e-13 80.9 86 53.5
ClCG09G006960 Citrullus lanatus HOM05D005387 ORTHO05D006711 1.9e-13 80.9 86 53.5
FvH4_2g23690 Fragaria vesca HOM05D005387 ORTHO05D006711 1.9e-13 80.9 86 53.5
FAN15G0991 Fragaria x ananassa HOM05D005387 ORTHO05D006711 1.9e-13 80.9 86 53.5
FAN24G0367 Fragaria x ananassa HOM05D005387 ORTHO05D006711 1.9e-13 80.9 86 53.5
Gohir.D11G127700 Gossypium hirsutum HOM05D005387 ORTHO05D006711 1.9e-13 80.9 48 79.2
Nitab4.5_0000295g0200 Nicotiana tabacum HOM05D005387 ORTHO05D006711 1.9e-13 80.9 106 49.1
Nitab4.5_0006390g0070 Nicotiana tabacum HOM05D005387 ORTHO05D006711 1.9e-13 80.9 106 49.1
Peaxi162Scf00161g01216 Petunia axillaris HOM05D005387 ORTHO05D006711 1.9e-13 80.9 106 49.1
RcHm_v2.0_Chr6g0291151 Rosa chinensis HOM05D005387 ORTHO05D006711 1.9e-13 80.9 86 53.5
Solyc06g008970.4 Solanum lycopersicum HOM05D005387 ORTHO05D006711 1.9e-13 80.9 106 49.1
Sopen06g003750 Solanum pennellii HOM05D005387 ORTHO05D006711 1.9e-13 80.9 106 49.1
Cc01_g19560 Coffea canephora HOM05D005387 ORTHO05D006711 2.5e-13 80.5 106 49.1
Lsat_1_v5_gn_9_3880 Lactuca sativa HOM05D005387 ORTHO05D006711 2.5e-13 80.5 106 49.1
Lj2A1174G27 Lonicera japonica HOM05D005387 ORTHO05D006711 2.5e-13 80.5 106 49.1
MBI18_g32210_MAGBIO Magnolia biondii HOM05D005387 ORTHO05D006711 2.5e-13 80.5 86 52.3
SalBow4G1053 Salvia bowleyana HOM05D005387 ORTHO05D006711 2.5e-13 80.5 106 49.1
Cre17.g706300 Chlamydomonas reinhardtii HOM05D005387 ORTHO05D006711 3.2e-13 80.1 48 79.2
Glyma.02G082200 Glycine max HOM05D005387 ORTHO05D006711 3.2e-13 80.1 86 53.5
Glyma.16G167800 Glycine max HOM05D005387 ORTHO05D006711 3.2e-13 80.1 86 53.5
Hma1.2p1_0257F.1_g103540 Hydrangea macrophylla HOM05D005387 ORTHO05D006711 3.2e-13 80.1 86 53.5
Lj2g0021203 Lotus japonicus HOM05D005387 ORTHO05D006711 3.2e-13 80.1 86 53.5
Medtr2g084735 Medicago truncatula HOM05D005387 ORTHO05D006711 3.2e-13 80.1 86 53.5
Phvul.004G095600 Phaseolus vulgaris HOM05D005387 ORTHO05D006711 3.2e-13 80.1 86 53.5
VMungo0464G1141 Vigna mungo HOM05D005387 ORTHO05D006711 3.2e-13 80.1 86 53.5
HanXRQChr04g0127651 Helianthus annuus HOM05D005387 ORTHO05D006711 4.2e-13 79.7 43 83.7
Lalb_Chr01g0009611 Lupinus albus HOM05D005387 ORTHO05D006711 4.2e-13 79.7 48 79.2
Aqoxy5G00512 Aquilegia oxysepala HOM05D005387 ORTHO05D006711 5.5e-13 79.3 86 52.3
ECA247G0058 Erigeron canadensis HOM05D005387 ORTHO05D006711 5.5e-13 79.3 106 48.1
Migut.M00248 Erythranthe guttata HOM05D005387 ORTHO05D006711 5.5e-13 79.3 54 72.2
Psat1g104680 Pisum sativum HOM05D005387 ORTHO05D006711 5.5e-13 79.3 86 53.5
Atru.chr5.1425 Acer truncatum HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 53.5
Aa31LG1G9340 Aethionema arabicum HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 53.5
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 53.5
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 53.5
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 53.5
BolC8t46846H Brassica oleracea HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 53.5
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 53.5
CARHR002530 Cardamine hirsuta HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 53.5
AUR62007973 Chenopodium quinoa HOM05D005387 ORTHO05D006711 7.1e-13 79.0 48 79.2
Duzib211G0289 Durio zibethinus HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 52.3
Thhalv10006888m.g Eutrema salsugineum HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 53.5
Thhalv10011297m.g Eutrema salsugineum HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 53.5
Gohir.A11G122400 Gossypium hirsutum HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 52.3
Gohir.D08G076600 Gossypium hirsutum HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 52.3
Gorai.004G081200 Gossypium raimondii HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 52.3
Gorai.007G136500 Gossypium raimondii HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 52.3
Manes.05G075500 Manihot esculenta HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 52.3
Prupe.8G242000 Prunus persica HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 52.3
QL12p022031 Quercus lobata HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 52.3
SHI14548 Sapria himalayana HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 52.3
Sp1g02210 Schrenkiella parvula HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 53.5
Thecc.01G280400 Theobroma cacao HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 52.3
HPP92_026404 Vanilla planifolia HOM05D005387 ORTHO05D006711 7.1e-13 79.0 86 51.2
AT1G03190 Arabidopsis thaliana HOM05D005387 ORTHO05D006711 9.3e-13 78.6 86 53.5
Cpa.g.sc52.27 Carica papaya HOM05D005387 ORTHO05D006711 9.3e-13 78.6 86 52.3
Cfa006132 Carpinus fangiana HOM05D005387 ORTHO05D006711 9.3e-13 78.6 86 52.3
CiPaw.07G092300 Carya illinoinensis HOM05D005387 ORTHO05D006711 9.3e-13 78.6 86 52.3
Haze_04719 Corylus avellana HOM05D005387 ORTHO05D006711 9.3e-13 78.6 86 52.3
Potri.002G054000 Populus trichocarpa HOM05D005387 ORTHO05D006711 9.3e-13 78.6 86 52.3
QL07p005503 Quercus lobata HOM05D005387 ORTHO05D006711 9.3e-13 78.6 48 77.1
SEGI_00354 Sequoiadendron giganteum HOM05D005387 ORTHO05D006711 9.3e-13 78.6 48 77.1
THA.LOC104825999 Tarenaya hassleriana HOM05D005387 ORTHO05D006711 9.3e-13 78.6 86 52.3
CAN.G1006.14 Capsicum annuum HOM05D005387 ORTHO05D006711 1.2e-12 78.2 106 48.1
Ciclev10018975m.g Citrus clementina HOM05D005387 ORTHO05D006711 1.2e-12 78.2 86 51.2
TPR.G36709 Trifolium pratense HOM05D005387 ORTHO05D006711 1.2e-12 78.2 86 52.3
TWI23G0758 Tripterygium wilfordii HOM05D005387 ORTHO05D006711 1.2e-12 78.2 86 52.3
ATR0626G059 Amborella trichopoda HOM05D005387 ORTHO05D006711 1.6e-12 77.8 48 77.1
Gohir.A08G068200 Gossypium hirsutum HOM05D005387 ORTHO05D006711 1.6e-12 77.8 86 51.2
MD03G1266200 Malus domestica HOM05D005387 ORTHO05D006711 2.7e-12 77.0 86 51.2
HPP92_023768 Vanilla planifolia HOM05D005387 ORTHO05D006711 2.7e-12 77.0 86 50.0
AL1G12680 Arabidopsis lyrata HOM05D005387 ORTHO05D006711 3.5e-12 76.6 86 52.3
Carub.0001s0233 Capsella rubella HOM05D005387 ORTHO05D006711 3.5e-12 76.6 86 52.3
Pp3c10_16570 Physcomitrium patens HOM05D005387 ORTHO05D006711 6.0e-12 75.9 48 72.9
MD11G1286800 Malus domestica HOM05D005387 ORTHO05D006711 7.9e-12 75.5 86 50.0
SHI33552 Sapria himalayana HOM05D005387 ORTHO05D006711 1.3e-11 74.7 86 51.2
PRCOL_00002595 Prasinoderma coloniale HOM05D005387 ORTHO05D006711 6.7e-11 72.4 43 79.1
CBR_g47089 Chara braunii HOM05D005387 ORTHO05D006711 1.1e-10 71.6 48 72.9
AUR62044203 Chenopodium quinoa HOM05D005387 ORTHO05D006711 4.8e-09 66.2 44 72.7
Haze_26829 Corylus avellana HOM05D005387 ORTHO05D006711 4.8e-09 66.2 46 60.9
AUR62044240 Chenopodium quinoa HOM05D005387 ORTHO05D006711 3.1e-08 63.5 82 47.6
COL.COLO4_09105 Corchorus olitorius HOM05D005387 ORTHO05D006711 1.2e-07 61.6 33 87.9
MCO11G848 Micromonas commoda HOM05D005387 ORTHO05D006711 2.0e-07 60.8 45 64.4


User provided reference genes

Program Settings