Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G42580 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 4.8e-65 251.1 139 100.0
AT5G65070 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 3.8e-54 214.9 139 87.1
Sp2g28150 Schrenkiella parvula HOM05D000042 ORTHO05D003657 1.5e-42 176.4 139 74.1
Thhalv10004949m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 1.7e-41 172.9 139 73.4
CARHR278980 Cardamine hirsuta HOM05D000042 ORTHO05D003657 1.9e-40 169.5 139 72.7
CARHR278990 Cardamine hirsuta HOM05D000042 ORTHO05D003657 1.0e-38 163.7 141 70.2
A02p43670 Brassica napus HOM05D000042 ORTHO05D003657 1.3e-38 163.3 141 70.2
BcaC03g18301 Brassica carinata HOM05D000042 ORTHO05D003657 2.3e-38 162.5 139 69.8
C02p63770 Brassica napus HOM05D000042 ORTHO05D003657 3.9e-38 161.8 139 69.1
Carub.0008s2591 Capsella rubella HOM05D000042 ORTHO05D003657 1.9e-37 159.5 139 67.6
BcaB07g29773 Brassica carinata HOM05D000042 ORTHO05D003657 1.6e-36 156.4 139 66.9
C02p63760 Brassica napus HOM05D000042 ORTHO05D003657 6.8e-35 151.0 139 68.3
C03p61060 Brassica napus HOM05D000042 ORTHO05D003657 2.0e-34 149.4 139 65.5
BolC3t18368H Brassica oleracea HOM05D000042 ORTHO05D003657 2.0e-34 149.4 139 65.5
BraA02t09291Z Brassica rapa HOM05D000042 ORTHO05D003657 5.8e-34 147.9 173 57.8
Carub.0002s2396 Capsella rubella HOM05D000042 ORTHO05D003657 4.9e-33 144.8 139 61.9
AL2G37250 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 9.2e-32 140.6 139 61.2
A06p31890 Brassica napus HOM05D000042 ORTHO05D003657 1.6e-31 139.8 140 64.3
BolC2t12443H Brassica oleracea HOM05D000042 ORTHO05D003657 1.6e-31 139.8 136 60.3
AT5G65080 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 6.0e-31 137.9 140 60.7
A06p31880 Brassica napus HOM05D000042 ORTHO05D003657 5.1e-30 134.8 139 56.8
Carub.0008s2592 Capsella rubella HOM05D000042 ORTHO05D003657 8.6e-30 134.0 139 61.2
AL233U10010 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 5.6e-29 131.3 139 58.3
Aa31LG1G16890 Aethionema arabicum HOM05D000042 ORTHO05D003657 1.2e-28 130.2 136 55.1
Thhalv10005413m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 1.2e-28 130.2 139 54.7
BraA06t26122Z Brassica rapa HOM05D000042 ORTHO05D003657 2.1e-28 129.4 170 52.9
BraA02t09290Z Brassica rapa HOM05D000042 ORTHO05D003657 1.1e-27 127.1 116 59.5
AT5G65060 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 2.3e-27 125.9 108 63.0
BolC2t12438H Brassica oleracea HOM05D000042 ORTHO05D003657 5.2e-27 124.8 139 56.8
BcaB07g29771 Brassica carinata HOM05D000042 ORTHO05D003657 8.9e-27 124.0 139 56.8
C02p63750 Brassica napus HOM05D000042 ORTHO05D003657 1.5e-26 123.2 139 56.1
BcaC03g18294 Brassica carinata HOM05D000042 ORTHO05D003657 2.0e-26 122.9 139 56.1
C02p63700 Brassica napus HOM05D000042 ORTHO05D003657 2.0e-26 122.9 139 56.1
A02p43650 Brassica napus HOM05D000042 ORTHO05D003657 3.4e-26 122.1 113 60.2
BcaB07g29772 Brassica carinata HOM05D000042 ORTHO05D003657 2.2e-25 119.4 139 53.2
BolC2t12446H Brassica oleracea HOM05D000042 ORTHO05D003657 1.2e-23 113.6 146 51.4
Sp2g28130 Schrenkiella parvula HOM05D000042 ORTHO05D003657 1.2e-23 113.6 119 61.3
AT1G77080 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 2.7e-23 112.5 129 51.9
AL6G20600 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.3e-22 110.2 137 50.4
Carub.0006s0860 Capsella rubella HOM05D000042 ORTHO05D003657 2.3e-22 109.4 139 51.1
AL6G20630 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.5e-21 106.7 139 48.9
AT5G65050 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 1.5e-21 106.7 139 54.7
BraA02t09289Z Brassica rapa HOM05D000042 ORTHO05D003657 1.9e-21 106.3 123 58.5
Aa31LG1G16900 Aethionema arabicum HOM05D000042 ORTHO05D003657 2.5e-21 105.9 88 60.2
AT5G10140 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 3.3e-21 105.5 139 49.6
A03p16730 Brassica napus HOM05D000042 ORTHO05D003657 5.6e-21 104.8 136 49.3
BraA03t10958Z Brassica rapa HOM05D000042 ORTHO05D003657 5.6e-21 104.8 136 49.3
CARHR203150 Cardamine hirsuta HOM05D000042 ORTHO05D003657 7.3e-21 104.4 139 48.2
BcaB01g04138 Brassica carinata HOM05D000042 ORTHO05D003657 9.6e-21 104.0 101 58.4
A10p27400 Brassica napus HOM05D000042 ORTHO05D003657 1.6e-20 103.2 139 48.2
BolC3t14347H Brassica oleracea HOM05D000042 ORTHO05D003657 2.1e-20 102.8 137 52.6
A02p00340 Brassica napus HOM05D000042 ORTHO05D003657 2.8e-20 102.4 137 51.1
BcaC04g19338 Brassica carinata HOM05D000042 ORTHO05D003657 3.6e-20 102.1 104 54.8
C09p67320 Brassica napus HOM05D000042 ORTHO05D003657 3.6e-20 102.1 104 54.8
BolC9t59500H Brassica oleracea HOM05D000042 ORTHO05D003657 3.6e-20 102.1 104 54.8
BcaC04g19334 Brassica carinata HOM05D000042 ORTHO05D003657 6.2e-20 101.3 136 48.5
BolC9t59496H Brassica oleracea HOM05D000042 ORTHO05D003657 6.2e-20 101.3 102 55.9
BcaB08g37135 Brassica carinata HOM05D000042 ORTHO05D003657 1.1e-19 100.5 139 48.2
BcaC01g02737 Brassica carinata HOM05D000042 ORTHO05D003657 1.1e-19 100.5 144 47.2
BraA10t44790Z Brassica rapa HOM05D000042 ORTHO05D003657 1.1e-19 100.5 136 48.5
BcaC04g19339 Brassica carinata HOM05D000042 ORTHO05D003657 1.4e-19 100.1 139 48.2
C09p67350 Brassica napus HOM05D000042 ORTHO05D003657 1.4e-19 100.1 139 48.2
C09p67380 Brassica napus HOM05D000042 ORTHO05D003657 1.4e-19 100.1 139 48.2
BolC9t59501H Brassica oleracea HOM05D000042 ORTHO05D003657 1.4e-19 100.1 139 48.2
BraA02t05019Z Brassica rapa HOM05D000042 ORTHO05D003657 1.8e-19 99.8 134 50.7
BcaB02g09858 Brassica carinata HOM05D000042 ORTHO05D003657 5.2e-19 98.2 139 46.0
Thhalv10014726m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 6.8e-19 97.8 139 47.5
BcaB01g05547 Brassica carinata HOM05D000042 ORTHO05D003657 8.9e-19 97.4 140 49.3
BcaC03g18299 Brassica carinata HOM05D000042 ORTHO05D003657 1.2e-18 97.1 87 59.8
C03p04920 Brassica napus HOM05D000042 ORTHO05D003657 5.8e-18 94.7 139 47.5
C02p04280 Brassica napus HOM05D000042 ORTHO05D003657 7.6e-18 94.4 137 48.2
THA.LOC104799064 Tarenaya hassleriana HOM05D000042 ORTHO05D003657 7.6e-18 94.4 142 46.5
BolC3t13023H Brassica oleracea HOM05D000042 ORTHO05D003657 1.3e-17 93.6 139 46.8
BcaB02g09859 Brassica carinata HOM05D000042 ORTHO05D003657 6.4e-17 91.3 108 54.6
A03p04430 Brassica napus HOM05D000042 ORTHO05D003657 6.4e-17 91.3 139 46.0
BraA03t09788Z Brassica rapa HOM05D000042 ORTHO05D003657 6.4e-17 91.3 139 46.0
THA.LOC104799088 Tarenaya hassleriana HOM05D000042 ORTHO05D003657 8.4e-17 90.9 139 46.0
Sp6g33260 Schrenkiella parvula HOM05D000042 ORTHO05D003657 1.1e-16 90.5 173 43.4
BcaC03g13297 Brassica carinata HOM05D000042 ORTHO05D003657 2.4e-16 89.4 138 47.1
BcaNung06584 Brassica carinata HOM05D000042 ORTHO05D003657 3.0e-14 82.4 143 44.1
THA.LOC104819303 Tarenaya hassleriana HOM05D000042 ORTHO05D003657 3.9e-14 82.0 141 45.4
BcaC04g19336 Brassica carinata HOM05D000042 ORTHO05D003657 2.5e-13 79.3 139 43.2
CARHR278970 Cardamine hirsuta HOM05D000042 ORTHO05D003657 2.1e-12 76.3 61 67.2
C03p19690 Brassica napus HOM05D000042 ORTHO05D003657 1.4e-11 73.6 116 44.8
Duzib251G0403 Durio zibethinus HOM05D000042 ORTHO05D003657 4.4e-10 68.6 139 39.6
Thecc.02G204500 Theobroma cacao HOM05D010221 ORTHO05D003657 3.8e-09 65.5 107 42.1
Nitab4.5_0001113g0020 Nicotiana tabacum HOM05D010014 ORTHO05D003657 1.1e-08 63.9 116 36.2
BcaC01g06037 Brassica carinata HOM05D000042 ORTHO05D003657 4.2e-08 62.0 78 52.6
Atru.chr11.2347 Acer truncatum HOM05D000042 ORTHO05D003657 5.4e-08 61.6 127 37.8
Solyc05g015720.2 Solanum lycopersicum HOM05D010014 ORTHO05D003657 9.3e-08 60.8 119 37.8
Cfa009378 Carpinus fangiana HOM05D000042 ORTHO05D003657 2.7e-07 59.3 146 35.6
Sopen05g011210 Solanum pennellii HOM05D000006 ORTHO05D000695 2.7e-07 59.3 116 34.5
Nitab4.5_0012816g0020 Nicotiana tabacum HOM05D000042 ORTHO05D003657 6.0e-07 58.2 147 32.7
CAN.G683.2 Capsicum annuum HOM05D000042 ORTHO05D003657 7.9e-07 57.8 122 36.1
Carub.0008s2589 Capsella rubella HOM05D000042 ORTHO05D003657 1.0e-06 57.4 39 69.2
Lsat_1_v5_gn_4_14100 Lactuca sativa HOM05D000042 ORTHO05D003657 1.3e-06 57.0 103 38.8
QL03p052074 Quercus lobata HOM05D010221 ORTHO05D003657 1.3e-06 57.0 150 33.3
AL8G42560 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.7e-06 56.6 39 69.2
Peaxi162Scf00023g02913 Petunia axillaris HOM05D000042 ORTHO05D003657 3.0e-06 55.8 107 36.4
PGR102G1466 Punica granatum HOM05D000042 ORTHO05D003657 3.9e-06 55.5 142 35.2
Aa31LG1G16910 Aethionema arabicum HOM05D000042 ORTHO05D003657 6.6e-06 54.7 63 58.7
Peaxi162Scf00128g01416 Petunia axillaris HOM05D010014 ORTHO05D003657 8.7e-06 54.3 123 31.7


User provided reference genes

Program Settings