Functional clusters
Information
- Type
- Mapman term
- Identifier
- 11.9.2.1
- Description
- lipid metabolism.lipid degradation.lipases.triacylglycerol lipase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Citrus sinensis | scaffold00067 | 17 | CH_csi_153 | 3 | 3 | 0.0000830404 |
Eucalyptus grandis | scaffold_10 | 17 | CH_egr_495 | 4 | 4 | 0.000000384134 |
Eucalyptus grandis | scaffold_5 | 17 | CH_egr_358 | 5 | 6 | 0.0000000040481 |
Eucalyptus grandis | scaffold_5 | 17 | CH_egr_398 | 6 | 18 | 0.0000000213121 |
Eucalyptus grandis | scaffold_8 | 17 | CH_egr_110 | 9 | 11 | 2.99025e-19 |
Eucalyptus grandis | scaffold_8 | 17 | CH_egr_239 | 6 | 7 | 0.00000000000816886 |
Eucalyptus grandis | scaffold_8 | 18 | CH_egr_129 | 15 | 261 | 0.0000000000000464423 |
Glycine max | Gm01 | 17 | CH_gma_79 | 7 | 19 | 0.0000000000422437 |
Glycine max | Gm02 | 17 | CH_gma_480 | 3 | 4 | 0.000757427 |
Glycine max | Gm07 | 17 | CH_gma_387 | 3 | 3 | 0.000189571 |
Glycine max | Gm17 | 17 | CH_gma_180 | 4 | 4 | 0.000000281237 |
Glycine max | Gm18 | 17 | CH_gma_386 | 3 | 3 | 0.000189571 |
Gossypium raimondii | Chr07 | 17 | CH_gra_81 | 6 | 7 | 0.00000000000522367 |
Malus domestica | 5 | 17 | CH_mdo_68 | 4 | 4 | 0.0000000364129 |
Manihot esculenta | scaffold05214 | 17 | CH_mes_178 | 3 | 4 | 0.00024583 |
Oryza sativa ssp. japonica | 1 | 17 | CH_osa_424 | 3 | 6 | 0.000800988 |
Oryza sativa ssp. japonica | 1 | 17 | CH_osa_343 | 3 | 4 | 0.00016041 |
Oryza sativa ssp. japonica | 7 | 17 | CH_osa_390 | 3 | 5 | 0.00040076 |
Physcomitrella patens | scaffold_1 | 17 | CH_ppa_28 | 3 | 3 | 0.0000762662 |
Populus trichocarpa | Chr14 | 17 | CH_ptr_358 | 3 | 3 | 0.0000828149 |
Populus trichocarpa | Chr14 | 17 | CH_ptr_118 | 5 | 5 | 0.000000000121662 |
Prunus persica | scaffold_3 | 17 | CH_ppe_330 | 3 | 3 | 0.0000657558 |
Prunus persica | scaffold_5 | 17 | CH_ppe_186 | 4 | 4 | 0.0000000829562 |
Prunus persica | scaffold_7 | 17 | CH_ppe_104 | 5 | 5 | 0.000000000101669 |
Ricinus communis | 29620 | 17 | CH_rco_175 | 3 | 3 | 0.0000528551 |
Ricinus communis | 29900 | 17 | CH_rco_104 | 4 | 5 | 0.000000337053 |
Ricinus communis | 30115 | 17 | CH_rco_174 | 3 | 3 | 0.0000528551 |
Solanum lycopersicum | ch02 | 17 | CH_sly_356 | 3 | 3 | 0.00012341 |
Solanum lycopersicum | ch02 | 17 | CH_sly_19 | 10 | 18 | 5.12998e-20 |
Solanum lycopersicum | ch02 | 18 | CH_sly_18 | 10 | 18 | 5.12998e-20 |
Vitis vinifera | chr10 | 17 | CH_vvi_117 | 5 | 6 | 0.000000000656042 |
Vitis vinifera | chr16 | 17 | CH_vvi_307 | 3 | 3 | 0.0000674335 |
Vitis vinifera | chr7 | 17 | CH_vvi_377 | 3 | 4 | 0.000269462 |
Zea mays | 10 | 17 | CH_zma_183 | 3 | 3 | 0.0000838469 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |