Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchChild MapMan terms
- Original MapMan term
- 9.1.6
- Description
- Secondary metabolism.terpenoids.carotenoid biosynthesis
- Type
- mapman
| MapMan | description | genes | species | aco | aof | ash | ath | atr | bdi | calsi | cam | cre | egu | hvu | lpe | mac | mco | mpo | msi | obr | osa | osaindica | oth | pab | ped | peq | ppa | ptr | sbi | sit | sly | smo | spo | ssp | tae | ttu | vvi | zjn | zma | zma-b104 | zma-ph207 | zosmarina |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9.1.6.2 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls | 418 | 37 | 8 | 9 | 10 | 9 | 11 | 9 | 10 | 8 | 7 | 7 | 12 | 8 | 12 | 11 | 8 | 0 | 10 | 10 | 8 | 7 | 10 | 15 | 9 | 12 | 14 | 8 | 10 | 11 | 23 | 8 | 25 | 29 | 17 | 10 | 10 | 11 | 0 | 12 | 10 |
| 9.1.6.1 | Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes | 407 | 37 | 10 | 10 | 8 | 7 | 10 | 10 | 28 | 8 | 7 | 11 | 10 | 7 | 11 | 5 | 8 | 0 | 9 | 9 | 9 | 9 | 9 | 8 | 8 | 15 | 20 | 9 | 9 | 11 | 14 | 8 | 22 | 26 | 18 | 9 | 9 | 9 | 0 | 10 | 7 |
| 9.1.6.2.1 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.carotenoid hydroxylase activities | 212 | 37 | 3 | 4 | 4 | 5 | 6 | 5 | 6 | 4 | 3 | 2 | 5 | 5 | 6 | 5 | 4 | 0 | 6 | 6 | 5 | 4 | 4 | 6 | 3 | 6 | 6 | 4 | 5 | 5 | 12 | 4 | 13 | 17 | 10 | 5 | 6 | 5 | 0 | 8 | 5 |
| 9.1.6.1.1 | Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.phytoene synthase (PSY) | 136 | 37 | 3 | 3 | 2 | 1 | 3 | 3 | 13 | 4 | 1 | 4 | 3 | 2 | 4 | 2 | 1 | 0 | 3 | 3 | 3 | 3 | 4 | 5 | 2 | 3 | 7 | 3 | 3 | 3 | 2 | 2 | 9 | 9 | 7 | 3 | 6 | 3 | 0 | 3 | 1 |
| 9.1.6.3 | Secondary metabolism.terpenoids.carotenoid biosynthesis.apocarotenoids | 107 | 34 | 2 | 1 | 2 | 2 | 3 | 3 | 2 | 2 | 0 | 2 | 3 | 3 | 2 | 0 | 2 | 0 | 3 | 3 | 2 | 2 | 4 | 0 | 3 | 6 | 9 | 2 | 2 | 4 | 3 | 3 | 6 | 11 | 5 | 2 | 1 | 3 | 0 | 3 | 1 |
| 9.1.6.2.1.1 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.carotenoid hydroxylase activities.carotenoid beta-ring hydroxylase (BCH) | 100 | 37 | 1 | 1 | 2 | 2 | 2 | 2 | 3 | 3 | 1 | 2 | 1 | 2 | 3 | 1 | 1 | 0 | 3 | 3 | 2 | 2 | 4 | 4 | 2 | 3 | 3 | 1 | 2 | 2 | 6 | 1 | 7 | 6 | 4 | 2 | 4 | 4 | 0 | 6 | 2 |
| 9.1.6.2.4 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.neoxanthin synthase (ABA4) | 60 | 36 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 4 | 0 | 2 | 3 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 1 | 1 | 3 | 1 | 1 | 3 | 3 | 1 | 1 | 2 | 2 | 0 | 2 | 2 |
| 9.1.6.3.1 | Secondary metabolism.terpenoids.carotenoid biosynthesis.apocarotenoids.class-CCD1 carotenoid cleavage dioxygenase | 60 | 33 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 2 | 3 | 4 | 1 | 1 | 2 | 3 | 1 | 4 | 8 | 5 | 2 | 0 | 1 | 0 | 1 | 1 |
| 9.1.6.2.3 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.zeaxanthin epoxidase (ZEP) | 55 | 37 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 3 | 2 | 2 | 3 | 1 | 2 | 1 | 1 | 1 | 3 | 3 | 2 | 2 | 1 | 2 | 0 | 2 | 1 |
| 9.1.6.1.6 | Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.lycopene beta cyclase (LCY-b) | 54 | 35 | 2 | 2 | 2 | 1 | 2 | 1 | 2 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 5 | 1 | 1 | 3 | 2 | 1 | 2 | 3 | 2 | 1 | 1 | 1 | 0 | 1 | 1 |
| 9.1.6.1.3 | Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.zeta-carotene isomerase (Z-ISO) | 52 | 32 | 1 | 1 | 0 | 1 | 1 | 1 | 9 | 0 | 1 | 1 | 3 | 1 | 2 | 0 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 5 | 2 | 2 | 1 | 0 | 1 | 0 | 1 | 1 |
| 9.1.6.1.7 | Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.carotenoid isomerase (CrtISO) | 47 | 35 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 4 | 3 | 2 | 1 | 0 | 2 | 0 | 2 | 1 |
| 9.1.6.2.2 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.violaxanthin de-epoxidase (VDE) | 47 | 34 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 7 | 1 | 3 | 3 | 2 | 1 | 0 | 1 | 0 | 0 | 1 |
| 9.1.6.3.2 | Secondary metabolism.terpenoids.carotenoid biosynthesis.apocarotenoids.class-CCD4 carotenoid cleavage dioxygenase | 47 | 29 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 0 | 1 | 0 | 2 | 2 | 1 | 1 | 3 | 0 | 1 | 3 | 5 | 1 | 1 | 2 | 0 | 2 | 2 | 3 | 0 | 0 | 1 | 2 | 0 | 2 | 0 |
| 9.1.6.2.5 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.neoxanthin biosynthesis cofactor (NXD1) | 44 | 34 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 2 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 3 | 3 | 2 | 1 | 1 | 1 | 0 | 0 | 1 |
| 9.1.6.1.4 | Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.zeta-carotene desaturase (ZDS) | 43 | 34 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 2 | 1 | 3 | 2 | 1 | 1 | 1 | 2 | 1 | 0 | 3 | 2 | 1 | 2 | 1 | 0 | 1 | 1 |
| 9.1.6.2.1.2 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.carotenoid hydroxylase activities.carotenoid beta-ring hydroxylase (LUT5) | 43 | 33 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 6 | 3 | 1 | 1 | 1 | 0 | 1 | 1 |
| 9.1.6.1.2 | Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.phytoene desaturase (PDS) | 42 | 34 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 2 | 3 | 2 | 1 | 0 | 1 | 0 | 2 | 1 |
| 9.1.6.2.1.4 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.carotenoid hydroxylase activities.carotenoid hydroxylase | 35 | 30 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 0 | 0 | 1 | 1 |
| 9.1.6.1.5 | Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.lycopene epsilon cyclase (LCY-e) | 34 | 30 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 3 | 1 | 1 | 0 | 0 | 0 | 0 | 1 |
| 9.1.6.2.1.3 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.carotenoid hydroxylase activities.carotenoid epsilon-ring hydroxylase (LUT1) | 34 | 29 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 3 | 2 | 1 | 0 | 0 | 0 | 0 | 1 |