Expansion plot
Gene family finder
Synteny plot
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Skyline plot
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Functional clusters
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BLAST
WorkbenchChild MapMan terms
- Original MapMan term
- 6.2
- Description
- Nucleotide metabolism.pyrimidines
- Type
- mapman
| MapMan | description | genes | species | aco | aof | ash | ath | atr | bdi | calsi | cam | cre | egu | hvu | lpe | mac | mco | mpo | msi | obr | osa | osaindica | oth | pab | ped | peq | ppa | ptr | sbi | sit | sly | smo | spo | ssp | tae | ttu | vvi | zjn | zma | zma-b104 | zma-ph207 | zosmarina |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6.2.1 | Nucleotide metabolism.pyrimidines.de novo biosynthesis | 480 | 37 | 11 | 12 | 11 | 11 | 8 | 12 | 16 | 12 | 7 | 14 | 10 | 11 | 15 | 6 | 7 | 0 | 10 | 13 | 14 | 12 | 8 | 12 | 10 | 14 | 14 | 14 | 15 | 8 | 19 | 9 | 23 | 34 | 22 | 10 | 10 | 18 | 0 | 16 | 12 |
| 6.2.4 | Nucleotide metabolism.pyrimidines.catabolism | 386 | 37 | 7 | 7 | 8 | 16 | 7 | 9 | 18 | 8 | 5 | 12 | 17 | 8 | 14 | 4 | 6 | 0 | 8 | 9 | 9 | 7 | 8 | 12 | 7 | 9 | 13 | 11 | 8 | 7 | 12 | 8 | 28 | 24 | 17 | 8 | 8 | 9 | 0 | 11 | 7 |
| 6.2.2 | Nucleotide metabolism.pyrimidines.salvage pathway | 208 | 37 | 5 | 5 | 4 | 6 | 4 | 6 | 6 | 6 | 3 | 6 | 4 | 5 | 6 | 2 | 2 | 0 | 6 | 5 | 5 | 4 | 4 | 6 | 3 | 7 | 6 | 6 | 6 | 6 | 4 | 4 | 16 | 12 | 8 | 8 | 5 | 6 | 0 | 6 | 5 |
| 6.2.3 | Nucleotide metabolism.pyrimidines.phosphotransfers | 195 | 37 | 5 | 3 | 3 | 5 | 4 | 4 | 6 | 6 | 3 | 7 | 5 | 4 | 6 | 1 | 4 | 0 | 5 | 6 | 3 | 5 | 2 | 6 | 3 | 9 | 6 | 5 | 5 | 4 | 5 | 3 | 14 | 15 | 10 | 4 | 3 | 6 | 0 | 6 | 4 |
| 6.2.1.6 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.CTP synthetase | 179 | 37 | 3 | 4 | 5 | 5 | 2 | 5 | 5 | 5 | 1 | 5 | 3 | 5 | 9 | 1 | 1 | 0 | 4 | 6 | 7 | 4 | 2 | 5 | 5 | 2 | 6 | 5 | 5 | 3 | 6 | 3 | 10 | 15 | 9 | 3 | 3 | 7 | 0 | 7 | 3 |
| 6.2.3.1 | Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase | 156 | 37 | 4 | 3 | 3 | 4 | 3 | 3 | 6 | 5 | 3 | 6 | 4 | 3 | 5 | 1 | 3 | 0 | 4 | 5 | 2 | 4 | 1 | 5 | 2 | 7 | 5 | 4 | 4 | 3 | 4 | 2 | 11 | 12 | 8 | 3 | 3 | 4 | 0 | 4 | 3 |
| 6.2.2.1 | Nucleotide metabolism.pyrimidines.salvage pathway.uridine/cytidine kinase (UCK) | 147 | 37 | 3 | 4 | 3 | 5 | 3 | 4 | 4 | 3 | 2 | 4 | 3 | 3 | 4 | 1 | 1 | 0 | 4 | 4 | 4 | 3 | 3 | 5 | 2 | 6 | 5 | 4 | 3 | 4 | 2 | 3 | 11 | 9 | 6 | 7 | 4 | 4 | 0 | 4 | 3 |
| 6.2.4.6 | Nucleotide metabolism.pyrimidines.catabolism.alanine aminotransferase (PYD4) | 116 | 36 | 3 | 3 | 2 | 3 | 2 | 4 | 7 | 3 | 1 | 3 | 2 | 3 | 4 | 0 | 1 | 0 | 3 | 3 | 3 | 2 | 1 | 3 | 2 | 1 | 3 | 3 | 3 | 2 | 2 | 3 | 10 | 9 | 6 | 3 | 3 | 3 | 0 | 5 | 2 |
| 6.2.1.1 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.carbamoyl phosphate synthetase heterodimer | 102 | 37 | 4 | 3 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 2 | 0 | 2 | 2 | 2 | 4 | 3 | 2 | 2 | 5 | 3 | 2 | 3 | 2 | 5 | 2 | 3 | 6 | 4 | 2 | 3 | 4 | 0 | 4 | 3 |
| 6.2.4.2 | Nucleotide metabolism.pyrimidines.catabolism.cytidine deaminase | 79 | 34 | 0 | 0 | 2 | 9 | 1 | 1 | 3 | 1 | 1 | 2 | 11 | 0 | 3 | 1 | 1 | 0 | 1 | 2 | 2 | 2 | 2 | 1 | 2 | 3 | 2 | 4 | 1 | 1 | 2 | 1 | 3 | 3 | 2 | 1 | 2 | 2 | 0 | 2 | 2 |
| 6.2.2.2 | Nucleotide metabolism.pyrimidines.salvage pathway.uracil phosphoribosyltransferase (UPP) | 61 | 37 | 2 | 1 | 1 | 1 | 1 | 2 | 2 | 3 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 3 | 2 | 2 | 1 | 5 | 3 | 2 | 1 | 1 | 2 | 0 | 2 | 2 |
| 6.2.1.5 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.UMP synthase | 60 | 36 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 2 | 1 | 1 | 2 | 0 | 2 | 2 | 3 | 2 | 1 | 2 | 1 | 1 | 5 | 3 | 2 | 2 | 3 | 0 | 1 | 1 |
| 6.2.1.1.2 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.carbamoyl phosphate synthetase heterodimer.small subunit | 53 | 36 | 3 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 3 | 2 | 1 | 1 | 1 | 3 | 1 | 0 | 3 | 2 | 1 | 2 | 2 | 0 | 2 | 2 |
| 6.2.1.2 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.aspartate transcarbamoylase | 52 | 36 | 1 | 2 | 1 | 1 | 1 | 1 | 4 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 2 | 1 | 4 | 3 | 2 | 1 | 0 | 2 | 0 | 2 | 1 |
| 6.2.4.3 | Nucleotide metabolism.pyrimidines.catabolism.dihydropyrimidine dehydrogenase (PYD1) | 51 | 36 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 6 | 3 | 2 | 1 | 0 | 1 | 0 | 1 | 1 |
| 6.2.1.1.1 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.carbamoyl phosphate synthetase heterodimer.large subunit | 50 | 37 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 3 | 1 | 1 | 2 | 1 | 2 | 1 | 3 | 3 | 2 | 1 | 1 | 2 | 0 | 2 | 1 |
| 6.2.1.3 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.dihydroorotase | 47 | 36 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 3 | 0 | 2 | 1 | 3 | 2 | 2 | 1 | 1 | 1 | 0 | 1 | 3 |
| 6.2.4.4 | Nucleotide metabolism.pyrimidines.catabolism.dihydopyrimidine aminohydrolase (PYD2) | 47 | 36 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 2 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 2 | 1 | 2 | 1 | 0 | 1 | 1 |
| 6.2.4.5 | Nucleotide metabolism.pyrimidines.catabolism.beta-ureidopropionase (PYD3) | 47 | 36 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 5 | 3 | 2 | 1 | 0 | 1 | 0 | 1 | 1 |
| 6.2.4.1 | Nucleotide metabolism.pyrimidines.catabolism.5'-nucleotidase | 46 | 33 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 2 | 1 | 1 | 3 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 3 | 1 | 1 | 1 | 2 | 1 | 3 | 3 | 3 | 1 | 1 | 1 | 0 | 1 | 0 |
| 6.2.1.4 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.dihydroorotate dehydrogenase | 41 | 35 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 3 | 2 | 1 | 1 | 1 | 0 | 1 | 1 |
| 6.2.3.2 | Nucleotide metabolism.pyrimidines.phosphotransfers.plastidial UMP kinase (PUMPKIN) | 39 | 31 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 3 | 2 | 1 | 0 | 2 | 0 | 2 | 1 |