Child MapMan terms

Original MapMan term
17.1.1
Description
Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis
Type
mapman

MapMan description genes species aco aof ash ath atr bdi calsi cam cre egu hvu lpe mac mco mpo msi obr osa osaindica oth pab ped peq ppa ptr sbi sit sly smo spo ssp tae ttu vvi zjn zma zma-b104 zma-ph207 zosmarina
17.1.1.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification 838 37 16 20 14 25 17 23 25 18 14 18 20 22 24 17 14 0 18 21 20 14 18 22 16 28 27 21 20 16 27 14 60 61 40 15 17 31 0 27 18
17.1.1.2.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation 495 37 8 10 8 16 11 15 14 10 7 10 12 14 13 9 8 0 11 13 12 8 14 13 9 18 16 13 12 11 15 9 34 36 24 9 6 20 0 16 11
17.1.1.2.1.5 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex 330 37 4 6 6 12 7 9 8 7 5 7 9 8 8 5 5 0 7 9 8 4 9 8 6 15 11 9 7 7 9 6 23 25 16 6 4 17 0 12 6
17.1.1.2.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation 293 37 5 9 5 7 5 7 10 7 6 7 6 6 10 7 5 0 6 7 7 5 3 8 6 9 9 7 7 4 10 4 23 22 14 5 10 10 0 10 5
17.1.1.2.2.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex 246 37 4 8 4 5 4 6 8 6 4 7 5 5 9 4 4 0 5 6 7 4 2 8 5 7 8 6 6 3 8 3 19 19 12 4 9 9 0 9 4
17.1.1.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA transcription 177 37 4 6 4 4 4 5 6 4 3 4 3 5 4 2 3 0 4 5 4 3 4 4 2 5 5 4 5 3 6 3 12 18 12 3 3 4 0 4 3
17.1.1.9 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS2 rRNA removal 167 36 4 5 2 3 3 4 4 4 2 4 6 4 6 2 3 0 4 4 4 4 0 4 4 4 6 4 4 3 6 3 12 18 9 4 2 3 0 3 6
17.1.1.8 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS1 rRNA removal 158 37 3 3 2 4 4 3 4 3 3 3 4 2 4 3 3 0 3 3 3 4 2 3 3 3 5 4 3 4 5 3 7 12 8 3 4 11 0 12 5
17.1.1.4 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA processing factor (IRP1) 132 35 4 5 2 3 3 3 6 2 0 4 4 2 6 0 1 0 2 3 3 3 2 6 1 3 4 3 3 3 2 1 11 9 6 4 4 5 0 5 4
17.1.1.2.1.5.4 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.component Snu13 83 37 2 1 2 3 2 2 2 2 1 2 1 1 2 1 1 0 1 2 1 1 3 1 2 4 2 2 1 2 1 2 8 3 2 2 2 9 0 6 1
17.1.1.2.2.1.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.pseudouridine synthase component Nap57/CBF5 78 37 1 2 1 1 2 2 2 2 1 2 1 1 3 1 1 0 2 3 4 2 1 4 2 2 2 2 2 1 2 1 6 5 3 1 3 3 0 3 1
17.1.1.2.1.5.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.snoRNP scaffold component Nop58 76 36 0 2 1 3 1 2 2 2 1 2 2 2 2 1 1 0 2 2 2 1 1 3 1 2 2 2 2 2 2 1 9 5 3 1 1 4 0 3 1
17.1.1.2.1.5.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.snoRNP scaffold component Nop56 71 36 1 2 1 2 1 2 2 2 1 2 3 2 2 1 1 0 1 2 2 1 1 2 1 2 2 2 2 1 2 1 3 9 5 1 0 2 0 2 2
17.1.1.1.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA transcription.rDNA chromatin transcription factor (NCL) 70 34 1 2 2 2 1 2 2 2 1 2 0 1 2 0 1 0 2 2 2 2 2 3 0 3 2 2 2 1 2 1 6 6 3 1 2 2 0 2 1
17.1.1.7 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.RNA endonuclease (FCF1) 68 37 1 2 1 2 2 1 12 1 1 2 1 2 2 1 1 0 1 1 1 1 2 2 1 2 2 1 1 1 2 1 2 3 2 2 1 4 0 2 1
17.1.1.5 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA chaperone (IRP2) 67 36 2 2 1 2 1 2 1 2 1 2 1 1 0 1 1 0 1 2 1 2 4 2 1 1 2 2 2 1 2 1 6 3 2 2 2 2 0 3 3
17.1.1.9.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS2 rRNA removal.polynucleotide kinase (GRC3) 67 33 2 2 1 1 1 2 3 2 0 2 2 2 2 0 1 0 2 2 2 2 0 1 2 1 1 2 2 1 2 1 7 6 4 2 0 1 0 1 2
17.1.1.2.2.1.4 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.non-core component Nhp2/Naf1 64 37 1 5 1 1 1 2 2 1 1 3 2 2 2 1 1 0 1 1 1 1 1 2 1 2 2 1 1 1 2 1 4 6 4 1 2 1 0 1 1
17.1.1.2.1.4 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22) 60 37 1 2 1 1 1 2 4 1 1 1 1 3 1 2 1 0 1 1 1 1 4 3 1 1 2 1 1 1 2 1 4 3 2 1 2 1 0 1 2
17.1.1.2.2.1.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.core component Gar1 59 35 1 1 1 2 1 1 3 1 1 2 1 1 2 1 1 0 1 1 1 1 0 2 1 2 2 1 1 1 2 0 4 5 3 1 2 3 0 4 1
17.1.1.9.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS2 rRNA removal.rRNA processing factor (APUM24) 57 35 1 1 0 1 1 1 1 1 1 1 4 1 3 1 1 0 1 1 1 1 0 2 1 1 3 1 1 1 2 1 3 9 3 1 1 1 0 1 2
17.1.1.1.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA transcription.rDNA transcriptional regulator (MAS2) 57 36 2 2 1 1 2 2 2 1 1 1 2 2 1 1 1 0 1 2 1 1 1 0 1 1 2 1 2 1 2 1 3 6 4 1 1 1 0 1 1
17.1.1.8.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS1 rRNA removal.assembly factor (BRX1) 57 37 1 1 1 2 1 1 2 1 1 2 2 1 2 1 1 0 1 1 1 1 1 1 1 1 2 1 1 1 2 1 4 6 4 1 1 2 0 2 1
17.1.1.2.1.5.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.methyltransferase component Nop1/fibrillarin 53 27 0 0 1 3 2 2 0 0 1 0 2 2 1 1 1 0 2 2 2 0 1 0 1 6 3 2 1 1 2 1 0 6 4 1 0 1 0 0 1
17.1.1.8.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS1 rRNA removal.pre-rRNA cleavage factor (SLX9) 52 32 1 1 0 1 2 1 0 1 1 0 1 0 1 1 1 0 1 1 1 2 1 1 1 1 2 2 1 1 2 1 0 3 2 1 1 7 0 7 1
17.1.1.1.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA transcription.rDNA transcriptional regulator (NOF1) 50 35 1 2 1 1 1 1 2 1 1 1 1 2 1 1 1 0 1 1 1 0 1 1 1 1 1 1 1 1 2 1 3 6 5 1 0 1 0 1 1
17.1.1.2.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.acetylation 50 37 3 1 1 2 1 1 1 1 1 1 2 2 1 1 1 0 1 1 1 1 1 1 1 1 2 1 1 1 2 1 3 3 2 1 1 1 0 1 2
17.1.1.2.3.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.acetylation.rRNA cytidine acetyltransferase 50 37 3 1 1 2 1 1 1 1 1 1 2 2 1 1 1 0 1 1 1 1 1 1 1 1 2 1 1 1 2 1 3 3 2 1 1 1 0 1 2
17.1.1.8.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS1 rRNA removal.pre-rRNA processing endonuclease (NOB1) 49 36 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 0 1 1 1 1 0 1 1 1 1 1 1 2 1 1 3 3 2 1 2 2 0 3 3
17.1.1.2.1.5.5 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.auxiliary assembly component NUFIP 47 37 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 0 1 1 1 1 3 2 1 1 2 1 1 1 2 1 3 2 2 1 1 1 0 1 1
17.1.1.2.2.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.rRNA pseudouridine synthase (RsuA) 47 34 1 1 1 2 1 1 2 1 2 0 1 1 1 3 1 0 1 1 0 1 1 0 1 2 1 1 1 1 2 1 4 3 2 1 1 1 0 1 1
17.1.1.2.1.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.rRNA adenosine dimethylase (DIM1A) 45 33 1 1 1 1 1 2 0 1 1 1 1 1 2 1 1 0 1 1 1 1 1 0 1 1 1 1 2 1 2 1 3 5 3 0 0 1 0 1 1
17.1.1.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA processing factor (APUM23) 45 37 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 0 1 1 1 1 3 2 1 1 1 1 1 1 1 1 2 3 2 1 1 1 0 1 1
17.1.1.2.2.1.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.core component Nop10 45 30 1 0 1 1 0 1 1 2 1 0 1 1 2 1 1 0 1 1 1 0 0 0 1 1 2 2 2 0 2 1 5 3 2 1 2 2 0 1 1
17.1.1.9.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS2 rRNA removal.pre-rRNA cleavage factor (LAS1) 43 34 1 2 1 1 1 1 0 1 1 1 0 1 1 1 1 0 1 1 1 1 0 1 1 2 2 1 1 1 2 1 2 3 2 1 1 1 0 1 2
17.1.1.6 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.RNA helicase (ROK1) 41 32 0 0 1 1 1 1 2 1 1 1 0 1 2 1 1 0 1 1 1 1 0 1 1 1 1 1 1 1 2 1 4 3 1 1 0 2 0 1 1
17.1.1.2.1.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.rRNA adenosine dimethylase (PFC) 33 29 1 1 0 1 1 1 1 1 0 0 1 1 1 1 1 0 1 1 1 1 0 1 0 1 1 1 1 1 2 1 3 0 2 1 0 0 0 1 1
17.1.1.2.1.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.rRNA adenosine dimethylase (DIM1B) 28 26 1 0 0 1 1 1 1 0 0 1 0 1 1 0 0 0 1 1 1 1 1 1 1 0 1 1 1 1 0 0 1 3 1 1 0 1 0 1 1