Child MapMan terms

Original MapMan term
12
Description
Chromatin organisation
Type
mapman

MapMan description genes species aco aof ash ath atr bdi calsi cam cre egu hvu lpe mac mco mpo msi obr osa osaindica oth pab ped peq ppa ptr sbi sit sly smo spo ssp tae ttu vvi zjn zma zma-b104 zma-ph207 zosmarina
12.3 Chromatin organisation.histone modifications 5654 37 119 113 105 142 108 143 201 137 48 162 132 142 168 43 79 0 132 131 124 108 156 180 120 150 201 153 152 155 166 107 377 437 272 121 85 183 0 179 123
12.3.3 Chromatin organisation.histone modifications.histone lysine methylation 3205 37 60 66 64 79 63 89 120 82 14 90 76 85 84 17 37 0 80 74 75 67 88 101 72 68 108 91 92 90 87 54 208 269 172 70 42 108 0 97 66
12.1 Chromatin organisation.histones 3061 37 41 15 33 48 27 50 90 63 125 55 176 88 71 18 29 0 47 54 43 39 149 54 61 57 65 57 51 71 43 38 158 556 286 37 51 94 0 90 31
12.5 Chromatin organisation.DNA methylation 2698 37 48 62 48 75 43 79 78 73 1 61 62 100 63 3 29 0 66 70 63 56 62 70 60 41 93 78 80 94 37 28 190 307 189 60 35 77 0 73 44
12.4 Chromatin organisation.chromatin remodeling complexes 2314 37 40 54 43 63 52 60 67 56 20 46 49 63 64 27 44 0 57 56 55 39 37 73 50 79 94 58 60 66 99 49 147 171 113 49 30 69 0 68 47
12.5.1 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway 1762 36 32 36 32 47 25 53 46 49 0 39 44 54 42 1 16 0 43 43 38 40 42 42 40 22 61 49 50 60 21 19 138 213 133 36 22 54 0 51 29
12.3.2 Chromatin organisation.histone modifications.histone deacetylation 1115 37 30 19 22 30 20 23 36 23 20 34 24 23 37 13 19 0 23 27 20 17 31 28 21 43 47 27 28 30 39 26 81 71 37 25 20 34 0 36 31
12.4.1 Chromatin organisation.chromatin remodeling complexes.ATPase modules 1098 37 14 27 24 33 27 34 28 25 8 15 22 33 32 12 21 0 30 31 28 13 10 29 28 38 48 29 30 36 56 26 58 86 56 25 7 29 0 27 23
12.2 Chromatin organisation.histone chaperone activities 969 37 20 26 13 22 16 29 40 20 12 28 24 31 29 12 12 0 19 22 22 16 34 35 15 22 44 20 21 27 28 15 71 65 41 22 20 29 0 30 17
12.1.2 Chromatin organisation.histones.histone (H2A) 882 37 11 6 11 13 9 13 26 14 30 18 52 24 23 5 7 0 15 16 13 10 49 18 17 13 17 18 14 26 13 10 45 135 77 16 13 37 0 38 10
12.3.3.1 Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex 756 37 12 18 16 21 13 20 22 17 4 25 17 23 24 6 8 0 18 18 18 18 20 29 14 12 26 19 21 18 22 14 46 63 43 16 9 25 0 25 16
12.3.3.9 Chromatin organisation.histone modifications.histone lysine methylation.JmjC group histone demethylase activities 726 37 15 14 13 17 14 21 41 22 2 23 20 17 20 4 8 0 19 15 15 17 22 19 17 12 24 22 22 19 18 11 45 50 32 17 10 29 0 24 16
12.1.5 Chromatin organisation.histones.histone (H4) 669 36 11 0 6 8 9 9 15 12 32 11 45 16 15 4 8 0 9 11 9 7 28 10 17 14 14 11 11 14 4 10 23 143 73 7 11 19 0 16 7
12.1.4 Chromatin organisation.histones.histone (H3) 641 36 10 1 8 13 0 13 9 17 32 12 35 23 16 4 7 0 10 13 8 10 16 13 9 15 15 11 12 12 7 9 43 124 61 4 10 17 0 15 7
12.1.3 Chromatin organisation.histones.histone (H2B) 640 37 5 8 6 11 6 12 14 16 28 8 39 19 10 3 6 0 10 11 9 8 32 10 12 9 11 13 10 15 11 6 35 131 65 5 11 15 0 15 5
12.3.3.7 Chromatin organisation.histone modifications.histone lysine methylation.class-V histone methyltransferase (Suvar) 605 35 9 12 12 14 9 20 18 18 0 10 17 21 10 0 3 0 15 13 16 12 13 20 16 11 18 20 20 16 10 7 46 74 46 11 5 18 0 15 10
12.3.2.1 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family 586 37 12 11 12 14 11 13 17 14 14 15 16 11 16 8 10 0 14 16 11 10 19 15 11 19 14 14 17 18 20 11 51 43 21 14 13 16 0 15 10
12.3.5 Chromatin organisation.histone modifications.histone ubiquitination 532 37 10 11 5 11 7 12 19 11 3 17 11 15 20 3 14 0 12 13 13 9 21 20 11 15 23 15 13 13 16 9 34 33 21 11 15 17 0 19 10
12.5.2 Chromatin organisation.DNA methylation.RNA-independent DNA methylation 455 37 8 14 5 11 8 12 25 13 1 9 7 28 9 1 6 0 12 15 14 6 7 13 8 5 12 13 16 13 8 4 23 52 31 12 6 10 0 10 8
12.3.3.1.2 Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.associated protein factors 453 37 7 14 12 12 7 11 11 10 1 16 11 14 17 1 2 0 11 11 11 8 11 21 10 6 16 11 11 12 14 9 27 35 25 9 5 16 0 17 11
12.3.6 Chromatin organisation.histone modifications.histone phosphorylation 417 37 9 8 6 9 6 11 11 11 4 8 13 9 16 3 3 0 9 9 9 9 7 19 8 13 12 12 10 11 10 9 31 35 23 8 6 14 0 18 8
12.3.2.4 Chromatin organisation.histone modifications.histone deacetylation.SNL-HDA19 histone deacetylase complex 415 37 15 7 8 11 10 7 14 8 4 14 7 8 18 2 7 0 7 9 9 6 7 15 8 20 30 9 8 8 15 12 22 21 10 8 7 13 0 13 18
12.4.2 Chromatin organisation.chromatin remodeling complexes.additional core components 377 37 7 8 7 8 7 7 15 10 2 11 9 8 10 3 5 0 9 9 9 9 6 15 7 13 13 9 10 10 10 7 35 24 16 8 7 13 0 14 7
12.3.5.1 Chromatin organisation.histone modifications.histone ubiquitination.PRC1 histone mono-ubiquitination complex 342 37 5 7 3 7 4 8 8 8 2 7 7 11 10 2 9 0 8 9 8 7 6 15 7 6 15 12 10 8 12 6 27 24 16 7 9 12 0 14 6
12.3.3.5 Chromatin organisation.histone modifications.histone lysine methylation.class-III histone methyltransferase (Trithorax) 328 37 6 8 6 8 7 8 11 7 2 7 5 7 9 2 4 0 9 7 7 6 9 10 8 9 11 8 8 9 16 6 22 25 16 6 4 13 0 14 8
12.4.1.1 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Snf2-like group 328 37 6 9 9 11 7 10 11 6 2 10 5 8 13 4 8 0 9 8 7 1 3 9 10 14 16 8 9 10 18 7 8 21 18 7 1 9 0 8 8
12.3.3.1.1 Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes 303 37 5 4 4 9 6 9 11 7 3 9 6 9 7 5 6 0 7 7 7 10 9 8 4 6 10 8 10 6 8 5 19 28 18 7 4 9 0 8 5
12.3.3.9.1 Chromatin organisation.histone modifications.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM3) 300 37 4 7 4 6 6 9 30 9 1 8 14 6 4 1 2 0 7 7 6 7 16 9 7 5 10 7 9 9 2 3 20 17 10 7 4 11 0 12 4
12.2.1 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex 286 37 5 8 5 7 5 7 11 5 3 11 7 5 10 4 4 0 7 6 6 4 7 11 5 5 14 6 6 6 10 5 22 16 9 7 5 13 0 14 5
12.5.1.2 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.auxiliary factor (MORC) 278 36 6 6 5 7 3 7 5 9 0 8 6 9 5 1 3 0 7 7 6 8 8 9 6 9 7 8 7 7 9 3 25 21 15 6 5 10 0 10 5
12.5.4 Chromatin organisation.DNA methylation.cytosine methylation reader activities 275 35 4 5 6 9 5 8 4 7 0 6 7 8 7 0 4 0 5 5 4 5 10 8 7 10 11 8 7 13 4 4 20 25 15 6 5 9 0 9 5
12.3.6.2 Chromatin organisation.histone modifications.histone phosphorylation.protein kinase (MLK) 274 37 6 5 4 5 3 8 6 7 2 7 8 7 11 1 1 0 6 6 6 6 4 14 4 10 7 7 7 7 6 6 20 23 15 5 5 11 0 13 5
12.4.3 Chromatin organisation.chromatin remodeling complexes.INO80 chromatin remodeling complex 273 35 5 5 4 7 5 6 10 6 0 8 8 7 8 0 5 0 6 5 6 5 10 10 5 7 13 6 6 7 9 6 20 18 12 7 5 10 0 10 6
12.4.1.5 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Rad5/16-like group 261 36 1 6 4 10 8 8 5 8 1 0 5 7 6 2 3 0 7 7 6 2 2 9 6 6 11 8 8 13 14 5 20 22 14 7 3 8 0 6 3
12.5.1.4 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.regulatory protein (IDN/IDP) 253 34 2 5 4 9 2 10 11 8 0 6 8 10 3 0 2 0 5 5 4 7 1 6 7 4 4 7 9 9 0 2 25 31 20 4 5 7 0 7 4
12.3.3.2 Chromatin organisation.histone modifications.histone lysine methylation.COMPASS histone trimethylation complex 252 37 5 3 5 5 6 6 9 7 3 10 4 5 6 2 5 0 6 7 6 4 8 7 5 9 8 8 7 5 10 5 15 16 9 5 8 10 0 8 5
12.3.5.1.1 Chromatin organisation.histone modifications.histone ubiquitination.PRC1 histone mono-ubiquitination complex.modification writer protein components 252 37 3 5 2 5 2 6 6 6 1 6 4 9 7 1 5 0 6 7 6 5 4 11 5 4 11 9 8 5 6 4 24 18 12 5 8 10 0 12 4
12.4.1.4 Chromatin organisation.chromatin remodeling complexes.ATPase modules.SSO1653-like group 251 37 5 6 6 6 6 7 7 6 2 2 5 10 6 3 6 0 6 7 7 5 4 5 6 7 12 6 6 7 12 6 18 18 9 6 2 6 0 7 6
12.1.1 Chromatin organisation.histones.linker histone (H1) 229 36 4 0 2 3 3 3 26 4 3 6 5 6 7 2 1 0 3 3 4 4 24 3 6 6 8 4 4 4 8 3 12 23 10 5 6 6 0 6 2
12.4.2.1 Chromatin organisation.chromatin remodeling complexes.additional core components.component BAF255/170 221 37 4 4 4 4 4 4 8 6 1 7 6 5 6 2 2 0 6 6 6 5 4 9 4 7 6 6 6 4 4 4 25 15 10 4 3 8 0 8 4
12.3.2.1.1 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase 216 37 5 4 4 6 4 6 6 5 4 6 7 5 8 2 2 0 5 8 4 4 4 7 4 3 5 6 6 4 5 3 26 17 6 5 6 4 0 5 5
12.3.1 Chromatin organisation.histone modifications.histone acetylation 215 37 6 4 4 7 8 4 11 6 3 8 4 6 6 5 3 0 4 4 4 4 7 9 4 4 5 4 5 5 8 4 11 17 11 3 1 6 0 6 4
12.5.3 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation 206 36 4 7 5 8 5 6 3 4 0 7 4 10 5 1 3 0 6 7 7 5 3 7 5 4 9 8 7 8 4 1 9 17 10 6 2 4 0 3 2
12.3.5.2 Chromatin organisation.histone modifications.histone ubiquitination.BAH-EMF1 Polycomb gene silencing complex 190 37 5 4 2 4 3 4 11 3 1 10 4 4 10 1 5 0 4 4 5 2 15 5 4 9 8 3 3 5 4 3 7 9 5 4 6 5 0 5 4
12.3.3.4 Chromatin organisation.histone modifications.histone lysine methylation.class-II histone methyltransferase (ASH1) 188 37 5 4 4 5 4 6 4 5 2 7 5 5 6 2 5 0 5 5 4 2 3 4 4 4 6 5 6 9 3 4 10 16 11 5 1 5 0 3 4
12.3.2.1.2 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase 186 37 3 3 4 5 4 4 6 4 6 6 4 4 5 2 4 0 6 5 5 3 7 4 4 5 4 4 4 4 8 3 11 17 10 4 3 5 0 4 2
12.5.2.4 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.ASI1-AIPP1-EDM2 chromatin silencing regulator complex 186 35 5 7 3 3 4 5 4 6 0 4 3 7 4 0 2 0 7 8 7 4 2 5 3 2 5 6 8 7 2 2 6 20 13 5 4 5 0 4 4
12.3.4 Chromatin organisation.histone modifications.histone arginine methylation 170 37 4 5 4 6 4 4 4 4 4 5 4 4 5 2 3 0 4 4 3 2 2 3 4 7 6 4 4 6 6 5 12 12 8 4 1 4 0 3 4
12.3.5.2.1 Chromatin organisation.histone modifications.histone ubiquitination.BAH-EMF1 Polycomb gene silencing complex.component BAH 165 37 4 4 1 3 2 4 8 3 1 5 4 4 7 1 5 0 4 4 5 2 12 5 3 9 6 3 3 4 4 3 7 9 5 3 6 5 0 5 2
12.5.1.16 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.downstream SUVH-DNAJ methylation reader complex 164 31 3 3 5 6 1 5 4 5 0 4 5 5 5 0 0 0 4 4 5 4 1 5 3 0 8 5 6 8 0 2 14 19 11 2 0 5 0 4 3
12.3.2.1.4 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex 163 37 3 3 4 3 4 3 4 4 3 3 5 3 3 3 3 0 3 2 2 2 7 3 2 9 5 2 4 10 5 5 11 9 5 6 4 7 0 6 3
12.2.2 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex 162 37 2 4 2 3 3 5 6 4 2 4 4 7 3 2 2 0 3 5 5 5 7 7 2 2 7 5 5 4 4 3 8 13 8 3 5 3 0 3 2
12.3.3.8 Chromatin organisation.histone modifications.histone lysine methylation.AOD group histone demethylase activities 162 35 4 3 3 4 5 4 5 3 0 4 4 4 5 0 2 0 4 4 4 4 6 6 4 6 6 4 4 6 3 4 12 12 6 3 3 4 0 4 3
12.2.1.3 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.component CAF1c/MSI 161 37 3 6 3 5 3 4 7 3 2 6 3 3 7 2 2 0 3 3 3 2 5 6 3 2 7 3 3 4 5 3 11 10 5 4 4 6 0 7 3
12.5.4.1 Chromatin organisation.DNA methylation.cytosine methylation reader activities.methylation reader (MBD1-4|12) 160 35 2 3 3 5 2 6 3 5 0 3 5 6 4 0 3 0 4 4 4 4 3 4 3 1 5 6 5 6 2 1 10 19 11 2 3 5 0 5 3
12.4.1.5.1 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Rad5/16-like group.chromatin remodeling factor (Rad5) 159 36 1 4 3 3 4 6 2 7 1 0 4 5 3 1 1 0 5 5 4 1 1 7 4 4 7 6 6 3 12 2 13 11 8 5 2 4 0 2 2
12.4.4 Chromatin organisation.chromatin remodeling complexes.SWR1 histone variant exchanging complex 155 37 4 3 3 4 3 5 3 6 3 3 3 4 3 4 3 0 3 3 3 3 2 5 3 4 5 5 4 3 6 3 12 13 9 2 2 4 0 4 3
12.3.1.1 Chromatin organisation.histone modifications.histone acetylation.histone acetyltransferase (HAC/HPCAT) 151 37 4 3 4 5 7 3 6 4 1 6 3 5 5 2 1 0 3 3 3 3 4 6 3 2 3 3 4 4 4 3 7 14 9 2 1 4 0 4 3
12.4.6 Chromatin organisation.chromatin remodeling complexes.SWR1/NuA4-shared subcomplex 151 37 3 5 2 4 4 3 4 2 3 2 3 4 4 3 4 0 3 3 3 3 2 5 3 6 6 3 4 4 6 3 9 12 8 4 5 3 0 3 3
12.3.3.1.2.2 Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.associated protein factors.PRC2-VRN-interacting PHD protein (VIN3|VRN5) 149 33 3 5 6 4 2 5 3 3 0 5 4 5 6 0 0 0 4 4 4 1 2 7 4 0 6 4 4 3 4 3 8 11 7 4 2 5 0 7 4
12.4.1.3 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Rad54-like group 149 36 1 3 2 3 3 6 4 2 2 0 5 5 3 2 2 0 5 6 6 3 1 4 3 5 6 4 4 3 6 3 8 16 9 2 1 3 0 4 4
12.4.5 Chromatin organisation.chromatin remodeling complexes.NuA4 histone acetyltransferase complex 148 37 5 3 1 4 4 3 7 4 2 4 1 3 3 3 3 0 3 2 3 4 5 7 2 8 4 3 3 3 8 2 7 9 6 2 2 6 0 6 3
12.3.5.1.1.1 Chromatin organisation.histone modifications.histone ubiquitination.PRC1 histone mono-ubiquitination complex.modification writer protein components.modification writer component BMI1 147 35 2 3 1 3 1 4 4 3 0 4 3 5 4 0 1 0 4 4 4 4 2 6 3 2 7 5 5 3 4 2 13 12 8 3 4 6 0 6 2
12.5.1.15 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.non-canonical RdDM pathway 145 34 3 3 1 4 1 5 7 3 0 3 3 4 4 0 1 0 4 3 2 5 4 6 2 2 5 4 4 5 0 1 11 11 8 5 3 7 0 10 1
12.5.3.1 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.methylcytosine-specific DNA glycosylase (ROS1) 142 36 2 5 3 4 2 5 3 4 0 5 2 7 3 1 2 0 4 6 5 3 1 6 5 3 5 5 5 5 2 1 6 12 7 3 2 4 0 3 1
12.3.2.4.4 Chromatin organisation.histone modifications.histone deacetylation.SNL-HDA19 histone deacetylase complex.associated component SAP30 138 37 7 3 3 2 4 1 7 2 2 7 2 1 9 1 1 0 2 3 3 1 4 3 2 8 16 1 2 2 4 6 3 3 2 3 2 4 0 2 10
12.2.6 Chromatin organisation.histone chaperone activities.histone chaperone (NAP) 135 37 3 4 1 4 2 2 7 3 2 4 2 3 5 1 1 0 2 4 4 2 6 7 2 3 9 2 3 6 4 2 7 6 4 2 3 4 0 4 5
12.5.1.14 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.DNA methylation accessory complex (DDR) 133 32 3 2 2 3 3 6 2 4 0 1 3 4 2 0 0 0 4 5 6 3 0 4 3 1 6 4 3 9 0 2 12 16 8 3 1 4 0 2 2
12.5.1.16.1 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.downstream SUVH-DNAJ methylation reader complex.methylated DNA binding component SUVH1/3 131 30 2 3 3 2 1 4 2 5 0 1 4 5 2 0 0 0 4 4 5 4 1 5 2 0 4 5 6 2 0 1 14 19 11 0 0 5 0 4 1
12.3.3.1.2.5 Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.associated protein factors.histone H3 methylation reader (PWO) 125 33 1 2 3 3 2 2 4 3 0 4 3 4 4 0 0 0 3 3 4 3 3 7 3 0 4 3 3 4 3 3 7 12 8 2 3 5 0 4 3
12.5.1.11 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.de novo DNA methylase (DRM) 123 34 1 2 1 2 1 2 1 5 0 3 5 8 3 0 1 0 1 1 1 1 5 1 2 0 1 3 2 3 1 1 10 28 20 1 1 2 0 2 1
12.5.1.7 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.RNA polymerase-IV-positioning factor (SHH) 123 33 2 2 3 2 2 2 3 2 0 0 3 2 2 0 2 0 2 3 1 2 9 0 4 1 4 3 3 4 4 2 9 18 13 3 1 4 0 3 3
12.5.1.13 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.siRNA-integrating factor (AGO) 122 32 3 3 2 4 1 3 4 3 0 3 2 4 3 0 3 0 3 3 4 2 0 4 2 2 5 4 4 5 0 1 7 18 8 4 0 3 0 2 3
12.4.1.4.3 Chromatin organisation.chromatin remodeling complexes.ATPase modules.SSO1653-like group.chromatin remodeling factor (ERCC6) 121 35 1 3 3 3 3 4 2 3 1 0 3 7 3 1 3 0 3 4 4 1 1 2 3 4 4 3 3 3 6 3 10 10 5 3 0 3 0 3 3
12.3.3.8.1 Chromatin organisation.histone modifications.histone lysine methylation.AOD group histone demethylase activities.lysine-specific demethylase (LDL/KDM1) 117 35 3 2 2 3 4 3 3 2 0 3 3 3 4 0 2 0 3 3 3 3 3 4 3 2 4 3 3 5 2 3 9 9 4 3 3 3 0 3 2
12.4.1.1.3 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Snf2-like group.chromatin remodeling factor (Snf2) 117 34 2 4 4 4 3 3 5 3 0 5 2 2 6 2 3 0 3 1 2 0 1 2 3 4 6 3 4 3 6 3 3 9 6 3 0 2 0 1 4
12.3.3.9.4 Chromatin organisation.histone modifications.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM7) 112 34 2 0 2 5 2 3 3 3 0 6 2 2 4 0 1 0 2 2 2 2 2 3 2 1 6 4 3 3 4 2 9 6 4 3 1 8 0 5 3
12.4.7 Chromatin organisation.chromatin remodeling complexes.SWR1/NuA4-shared helicase (RVB) 112 36 2 3 2 3 2 2 0 3 2 3 3 4 4 2 3 0 3 3 3 2 2 2 2 3 5 3 3 3 4 2 6 9 6 1 2 4 0 4 2
12.5.2.3 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.DNA chromomethylase (CMT) 111 33 2 4 1 3 2 4 2 3 0 2 1 14 2 0 2 0 2 3 3 1 0 3 3 1 2 3 3 3 2 1 9 14 8 4 0 1 0 2 1
12.3.3.3 Chromatin organisation.histone modifications.histone lysine methylation.class-I histone methyltransferase (Ez) 107 36 1 2 2 3 3 2 8 2 1 3 3 3 2 1 3 0 2 2 2 2 2 3 2 1 4 2 2 4 3 2 8 9 6 3 0 3 0 4 2
12.3.3.1.2.1 Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.associated protein factors.PRC2-recruiting factor (TRB) 106 33 2 4 1 3 1 3 1 3 0 4 3 2 4 0 1 0 2 2 2 3 0 4 2 3 4 3 3 3 5 1 11 9 6 2 0 3 0 3 3
12.3.5.1.1.2 Chromatin organisation.histone modifications.histone ubiquitination.PRC1 histone mono-ubiquitination complex.modification writer protein components.modification writer component RING1 105 37 1 2 1 2 1 2 2 3 1 2 1 4 3 1 4 0 2 3 2 1 2 5 2 2 4 4 3 2 2 2 11 6 4 2 4 4 0 6 2
12.5.2.2 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.DNA methyltransferase (MET) 104 36 1 2 1 4 1 2 18 3 1 3 3 4 2 0 1 0 2 2 2 1 3 4 1 1 3 2 3 1 2 1 5 9 5 3 2 2 0 2 2
12.3.2.2 Chromatin organisation.histone modifications.histone deacetylation.HD2 histone deacetylase 103 32 3 0 1 4 0 3 2 2 0 4 1 4 4 0 1 0 2 3 2 0 4 1 2 3 3 5 3 3 2 2 9 7 4 2 2 5 0 7 3
12.5.4.3 Chromatin organisation.DNA methylation.cytosine methylation reader activities.methylation reader (MBD10-11) 103 34 2 2 3 2 2 2 1 2 0 3 2 2 3 0 1 0 1 1 0 1 3 4 4 9 4 2 2 5 2 3 10 6 4 3 2 4 0 4 2
12.5.1.15.1 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.non-canonical RdDM pathway.protein factor (NERD) 101 34 2 2 1 2 1 4 2 2 0 2 2 3 4 0 1 0 3 2 1 4 1 6 2 2 3 3 3 2 0 1 7 8 6 2 3 5 0 8 1
12.2.8 Chromatin organisation.histone chaperone activities.histone chaperone (NRP) 100 36 4 4 1 2 2 2 9 2 1 4 1 2 4 0 1 0 2 2 2 1 7 1 1 2 5 2 2 5 2 1 7 6 4 2 2 2 0 2 1
12.3.6.1 Chromatin organisation.histone modifications.histone phosphorylation.protein kinase (AURORA) 99 36 2 2 1 3 2 2 2 3 1 0 4 1 4 1 1 0 2 2 2 2 2 4 3 2 3 4 2 3 2 2 9 9 6 2 1 2 0 4 2
12.4.3.5 Chromatin organisation.chromatin remodeling complexes.INO80 chromatin remodeling complex.component IES2 99 35 2 1 1 3 2 2 3 2 0 4 3 2 3 0 1 0 2 2 2 2 4 4 1 1 6 2 2 3 2 2 6 6 4 3 3 5 0 5 3
12.3.3.1.1.4 Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.catalytic component CLF|SWN|MEA 98 36 1 2 1 3 3 2 6 2 1 3 3 3 2 1 3 0 2 2 2 2 2 2 2 1 4 2 2 3 3 2 6 9 5 2 0 3 0 4 2
12.3.3.1.1.3 Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component EMF2|VRN2|FIS2 96 36 1 1 1 4 1 2 2 2 0 3 2 4 2 1 1 0 2 2 2 3 5 4 1 3 3 3 4 1 2 1 5 10 7 3 4 2 0 1 1
12.3.2.4.2 Chromatin organisation.histone modifications.histone deacetylation.SNL-HDA19 histone deacetylase complex.key scaffold component SNL 91 34 2 1 2 6 1 2 3 2 0 2 2 3 4 0 2 0 1 2 1 2 2 5 1 6 3 2 2 3 3 2 4 6 3 2 0 3 0 3 3
12.3.2.3 Chromatin organisation.histone modifications.histone deacetylation.SIRTUIN histone deacetylase 90 37 2 2 2 2 2 2 4 1 2 3 2 2 2 3 2 0 2 2 1 2 1 1 2 3 2 1 2 2 6 2 8 6 3 2 1 2 0 4 2
12.4.1.5.3 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Rad5/16-like group.chromatin remodeling factor (Ris1) 90 30 0 2 0 5 2 4 2 4 0 0 1 4 2 0 1 0 3 3 3 0 0 3 2 2 3 4 4 2 4 2 4 9 5 2 2 3 0 2 1
12.2.5 Chromatin organisation.histone chaperone activities.histone chaperone (NASP) 89 37 1 2 1 1 1 8 2 1 1 2 5 9 1 1 1 0 1 1 1 1 1 1 1 2 2 1 1 1 2 1 6 12 8 2 2 2 0 2 1
12.5.1.3 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.stabilization factor (SGS3) 88 33 1 2 2 1 3 1 1 3 0 2 2 1 3 0 1 0 3 2 2 1 9 2 2 1 11 2 2 2 0 1 5 6 5 1 0 4 0 3 1
12.3.3.2.3 Chromatin organisation.histone modifications.histone lysine methylation.COMPASS histone trimethylation complex.component WDR5 87 35 2 1 3 2 2 2 4 2 1 0 2 2 3 1 2 0 2 2 2 0 3 2 2 3 3 2 2 2 2 2 5 6 4 2 3 3 0 4 2
12.2.2.1 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.component SPT16 86 37 1 2 1 2 2 3 2 1 1 2 2 5 2 1 1 0 1 3 3 3 3 4 1 1 5 3 2 3 2 1 4 6 4 2 4 1 0 1 1
12.4.1.4.1 Chromatin organisation.chromatin remodeling complexes.ATPase modules.SSO1653-like group.chromatin remodeling factor (SHPRH) 86 36 3 2 2 2 2 2 4 2 0 2 1 2 2 1 2 0 2 1 2 2 2 1 2 2 7 2 2 3 4 2 4 5 3 2 2 2 0 3 2
12.5.2.4.2 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.ASI1-AIPP1-EDM2 chromatin silencing regulator complex.component AIPP1/EDM3 86 34 2 4 1 1 2 2 1 3 0 1 2 3 1 0 1 0 3 4 4 2 1 2 1 2 1 2 4 3 2 0 2 11 7 1 3 3 0 3 1
12.4.5.2 Chromatin organisation.chromatin remodeling complexes.NuA4 histone acetyltransferase complex.platform component EAF1 84 34 3 2 1 2 3 2 2 2 0 2 0 2 2 0 1 0 2 1 2 3 2 4 1 6 2 2 2 2 4 1 3 6 4 1 2 4 0 4 2
12.3.4.3 Chromatin organisation.histone modifications.histone arginine methylation.TDRD3-TOP3B methyl-arginine reader complex 83 37 2 2 2 2 2 2 2 2 2 3 2 2 2 2 2 0 2 2 1 2 2 2 2 3 2 2 2 2 2 2 5 6 4 2 1 2 0 2 2
12.3.3.9.6 Chromatin organisation.histone modifications.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM9) 82 33 3 2 2 1 1 3 1 3 0 2 0 2 4 0 1 0 3 2 2 2 0 2 2 2 2 4 3 1 2 1 5 6 4 2 2 4 0 3 3
12.3.2.4.1 Chromatin organisation.histone modifications.histone deacetylation.SNL-HDA19 histone deacetylase complex.deacetylase component HDA19 79 34 2 1 1 1 3 2 1 2 0 2 2 2 3 0 1 0 2 3 3 1 0 4 2 2 2 2 2 1 4 1 9 6 1 1 3 2 0 3 2
12.4.1.1.5 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Snf2-like group.chromatin remodeling factor (Chd3/Mi-2) 79 32 2 2 2 3 2 2 1 1 0 2 0 2 3 0 2 0 2 2 2 0 1 2 3 5 4 2 2 3 6 1 4 3 4 1 0 3 0 3 2
12.5.1.1 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.methyl-DNA-binding factor (SUVH2|9) 79 30 2 1 3 2 1 3 3 2 0 2 2 1 3 0 0 0 2 2 2 0 1 3 3 0 2 2 2 2 0 1 7 12 7 1 2 1 0 0 2
12.3.3.6 Chromatin organisation.histone modifications.histone lysine methylation.class IV histone methyltransferase 78 35 2 2 2 2 1 2 3 1 0 1 2 1 2 0 1 0 2 2 2 2 3 3 2 3 4 4 2 2 1 2 2 7 4 2 1 2 0 2 2
12.2.1.1 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.component CAF1a/FAS1 76 37 1 1 1 1 1 1 2 1 1 3 3 1 2 1 1 0 3 2 2 1 1 3 1 1 5 2 2 1 2 1 7 3 2 2 1 6 0 6 1
12.2.2.2 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.component SSRP 76 37 1 2 1 1 1 2 4 3 1 2 2 2 1 1 1 0 2 2 2 2 4 3 1 1 2 2 3 1 2 2 4 7 4 1 1 2 0 2 1
12.2.3 Chromatin organisation.histone chaperone activities.histone chaperone (ASF1) 76 37 1 3 1 2 1 2 2 1 1 2 2 2 2 1 1 0 2 2 2 1 4 3 2 4 2 1 1 3 2 1 3 6 4 2 2 2 0 2 1
12.4.1.3.3 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Rad54-like group.chromatin remodeling factor (DRD1) 74 32 1 1 1 1 1 4 2 2 0 0 3 3 1 0 0 0 3 4 4 1 1 3 1 1 2 2 2 1 0 1 5 10 6 1 1 2 0 2 1
12.3.2.1.4.2 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.component PWR 72 37 1 1 1 1 2 1 2 2 1 2 4 1 2 1 1 0 1 1 1 1 5 2 1 7 2 1 3 1 2 2 4 3 1 1 2 4 0 3 1
12.3.3.9.5 Chromatin organisation.histone modifications.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM8) 72 32 2 2 1 1 1 1 3 2 0 4 0 2 3 0 0 0 2 1 1 2 2 3 2 0 2 2 2 2 2 2 4 6 4 2 1 3 0 2 3
12.4.1.6 Chromatin organisation.chromatin remodeling complexes.ATPase modules.SMARCAL1-like group 72 35 1 2 2 2 2 2 1 2 1 2 2 2 3 1 1 0 2 2 2 1 0 1 2 3 2 2 2 2 4 4 1 6 4 2 0 2 0 1 1
12.4.1.6.1 Chromatin organisation.chromatin remodeling complexes.ATPase modules.SMARCAL1-like group.chromatin remodeling factor (SMARCAL1) 72 35 1 2 2 2 2 2 1 2 1 2 2 2 3 1 1 0 2 2 2 1 0 1 2 3 2 2 2 2 4 4 1 6 4 2 0 2 0 1 1
12.5.1.14.1 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.DNA methylation accessory complex (DDR).component DRD1 71 31 1 1 1 1 1 4 1 2 0 0 2 3 1 0 0 0 3 4 4 1 0 3 1 1 2 2 2 1 0 1 5 10 6 1 1 2 0 2 1
12.3.3.1.1.2 Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component FIE 68 36 2 1 1 1 1 4 1 2 1 1 1 1 1 2 1 0 2 2 2 4 2 1 1 1 1 2 3 1 1 1 6 6 5 1 0 2 0 2 1
12.4.2.2 Chromatin organisation.chromatin remodeling complexes.additional core components.component BAF60 68 37 1 1 1 2 1 1 3 2 1 2 1 1 2 1 1 0 1 1 1 1 2 4 1 4 4 1 2 2 2 1 3 3 2 2 2 3 0 4 1
12.4.1.1.4 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Snf2-like group.chromatin remodeling factor (Iswi) 67 34 1 1 1 2 1 3 4 1 1 1 1 2 2 2 1 0 2 3 1 0 0 4 2 2 3 1 1 2 4 1 0 6 4 1 1 2 0 2 1
12.3.1.2 Chromatin organisation.histone modifications.histone acetylation.histone acetyltransferase (HAM/HAG5|6) 64 35 2 1 0 2 1 1 5 2 2 2 1 1 1 3 2 0 1 1 1 1 3 3 1 2 2 1 1 1 4 1 4 3 2 1 0 2 0 2 1
12.3.3.2.1 Chromatin organisation.histone modifications.histone lysine methylation.COMPASS histone trimethylation complex.component ASH2 64 34 1 0 1 1 1 2 2 2 1 6 0 1 1 0 1 0 2 3 2 2 1 2 1 2 2 3 2 1 2 1 4 4 1 1 2 4 0 1 1
12.4.5.1 Chromatin organisation.chromatin remodeling complexes.NuA4 histone acetyltransferase complex.acetyltransferase component HAM 64 35 2 1 0 2 1 1 5 2 2 2 1 1 1 3 2 0 1 1 1 1 3 3 1 2 2 1 1 1 4 1 4 3 2 1 0 2 0 2 1
12.5.3.2 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.ROS1-recruitment complex 64 28 2 2 2 4 3 1 0 0 0 2 2 3 2 0 1 0 2 1 2 2 2 1 0 1 4 3 2 3 2 0 3 5 3 3 0 0 0 0 1
12.2.7 Chromatin organisation.histone chaperone activities.histone chaperone (SPT6) 63 37 2 1 1 2 1 2 1 2 1 1 2 2 2 1 1 0 1 1 1 1 1 3 1 2 3 1 1 1 2 1 9 3 2 3 1 1 0 1 1
12.3.2.1.4.3 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.component HOS15 62 36 2 2 2 1 1 1 2 1 1 0 1 1 1 1 1 0 1 1 1 1 2 1 1 1 2 1 1 8 2 2 5 3 2 3 1 2 0 2 1
12.5.1.8 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.endoribonuclease (DCL3) 61 30 2 2 1 1 1 3 2 1 0 2 0 2 2 0 2 0 2 2 1 2 0 0 1 1 1 2 2 1 5 0 5 6 4 1 0 1 0 2 1
12.2.4 Chromatin organisation.histone chaperone activities.histone chaperone (HIRA) 59 34 2 0 1 1 1 1 2 2 1 0 1 1 2 2 1 0 1 1 1 1 1 2 1 2 2 2 2 1 2 1 10 3 2 1 0 2 0 2 1
12.3.2.4.5 Chromatin organisation.histone modifications.histone deacetylation.SNL-HDA19 histone deacetylase complex.associated component HDC1/Rxt3 57 33 2 1 1 1 1 1 2 1 1 2 0 1 1 1 2 0 1 0 1 1 0 2 2 3 6 3 1 1 2 2 3 3 2 1 0 1 0 2 2
12.3.3.10 Chromatin organisation.histone modifications.histone lysine methylation.histone H3K4/H3K36 methylation reader (MRG) 55 36 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 0 1 3 2 1 1 1 1 2 3 1 1 2 4 1 3 3 2 2 0 1 0 1 1
12.3.3.2.2 Chromatin organisation.histone modifications.histone lysine methylation.COMPASS histone trimethylation complex.component RBL 54 37 1 1 1 1 1 1 2 2 1 3 1 1 1 1 1 0 1 1 1 1 3 2 1 2 2 1 2 1 2 1 3 3 2 1 2 1 0 1 1
12.3.3.9.8 Chromatin organisation.histone modifications.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM12) 54 33 1 1 1 1 1 2 2 2 0 1 1 2 2 2 1 0 2 1 1 2 1 0 1 1 1 2 2 1 2 1 3 6 4 1 1 0 0 0 1
12.4.1.5.2 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Rad5/16-like group.chromatin remodeling factor (Rad5-like) 54 31 0 1 1 2 2 1 1 1 0 0 1 1 1 1 1 0 1 1 1 1 1 1 1 0 1 1 1 8 2 1 4 4 3 3 0 3 0 2 0
12.5.2.1 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.chromatin remodeling factor (DDM1) 54 28 0 1 0 1 1 1 1 1 0 0 0 3 1 1 1 0 1 2 2 0 2 1 1 1 2 2 2 2 2 0 3 9 5 0 0 2 0 2 1
12.4.6.1 Chromatin organisation.chromatin remodeling complexes.SWR1/NuA4-shared subcomplex.component ARP4 53 34 1 2 0 1 2 1 2 1 0 1 2 2 1 1 1 0 1 1 1 1 0 2 1 2 2 1 1 1 2 1 2 6 4 1 2 1 0 1 1
12.5.2.4.3 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.ASI1-AIPP1-EDM2 chromatin silencing regulator complex.component EDM2 52 29 2 2 1 1 1 2 1 2 0 1 0 2 1 0 1 0 3 3 2 1 0 1 1 0 1 2 3 2 0 1 1 6 4 2 0 1 0 0 1
12.3.2.1.3 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-III histone deacetylase 51 33 1 1 1 1 0 1 1 2 2 1 0 0 1 2 2 0 1 1 0 1 1 1 1 3 1 2 3 1 3 1 5 3 2 1 1 1 0 1 1
12.3.3.1.2.3 Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.associated protein factors.chromatin-silencing modulator (BLI) 51 34 1 2 1 1 1 1 2 1 1 3 1 1 2 1 1 0 1 1 0 1 2 2 1 3 2 1 1 2 2 1 0 3 2 1 0 2 0 2 1
12.3.2.4.3 Chromatin organisation.histone modifications.histone deacetylation.SNL-HDA19 histone deacetylase complex.associated component SAP18 50 36 2 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1 1 3 1 1 1 2 1 3 3 2 1 2 3 0 3 1
12.4.4.3 Chromatin organisation.chromatin remodeling complexes.SWR1 histone variant exchanging complex.component SWC6 50 36 1 1 1 1 1 1 1 3 1 2 1 1 1 1 1 0 1 1 1 1 0 1 1 1 1 3 1 1 2 1 6 3 2 1 1 1 0 1 1
12.4.6.2 Chromatin organisation.chromatin remodeling complexes.SWR1/NuA4-shared subcomplex.component YAF9 50 35 1 1 1 2 1 1 1 0 2 1 0 1 2 1 1 0 1 1 1 1 1 1 1 2 3 1 1 2 2 1 3 3 2 2 2 1 0 1 1
12.2.1.2 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.component CAF1b/FAS2 49 35 1 1 1 1 1 2 2 1 0 2 1 1 1 1 1 0 1 1 1 1 1 2 1 2 2 1 1 1 3 1 4 3 2 1 0 1 0 1 1
12.3.5.1.2 Chromatin organisation.histone modifications.histone ubiquitination.PRC1 histone mono-ubiquitination complex.modification reader component Pc/LHP1 48 32 1 1 0 1 1 1 1 1 0 0 2 1 2 0 3 0 1 1 1 1 1 2 1 1 2 2 1 2 4 1 3 3 2 1 0 1 0 1 1
12.4.3.4 Chromatin organisation.chromatin remodeling complexes.INO80 chromatin remodeling complex.component IES6 48 35 1 1 1 1 1 1 3 1 0 1 2 2 1 0 1 0 1 1 1 1 2 1 1 2 2 1 1 1 2 1 3 3 2 1 1 1 0 1 1
12.4.6.3 Chromatin organisation.chromatin remodeling complexes.SWR1/NuA4-shared subcomplex.recruitment factor component SWC4 48 36 1 2 1 1 1 1 1 1 1 0 1 1 1 1 2 0 1 1 1 1 1 2 1 2 1 1 2 1 2 1 4 3 2 1 1 1 0 1 1
12.5.2.4.1 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.ASI1-AIPP1-EDM2 chromatin silencing regulator complex.component ASI1/IBM2 48 32 1 1 1 1 1 1 2 1 0 2 1 2 2 0 0 0 1 1 1 1 1 2 1 0 3 2 1 2 0 1 3 3 2 2 1 1 0 1 2
12.3.3.2.4 Chromatin organisation.histone modifications.histone lysine methylation.COMPASS histone trimethylation complex.auxiliary component S2Lb 47 34 1 1 0 1 2 1 1 1 0 1 1 1 1 0 1 0 1 1 1 1 1 1 1 2 1 2 1 1 4 1 3 3 2 1 1 2 0 2 1
12.5.3.2.2 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.ROS1-recruitment complex.component IDM1 47 25 2 2 2 1 1 1 0 0 0 2 2 3 2 0 0 0 2 1 2 2 1 1 0 0 1 3 2 1 0 0 3 5 3 1 0 0 0 0 1
12.3.3.11 Chromatin organisation.histone modifications.histone lysine methylation.histone H3K9 methylation reader (AGDP1) 46 29 1 1 1 1 3 1 3 1 0 1 1 1 1 0 0 0 1 0 1 1 3 1 1 0 2 0 1 3 0 0 5 3 2 2 1 1 0 1 1
12.4.4.2 Chromatin organisation.chromatin remodeling complexes.SWR1 histone variant exchanging complex.component SWC2 46 37 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 2 1 1 1 1 1 1 2 1 5 3 2 1 1 1 0 1 1
12.5.1.6 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.RNA polymerase-IV/V auxiliary factor (RDM4) 46 35 1 1 1 1 1 1 1 1 0 1 1 1 1 0 1 0 2 2 1 3 1 1 1 1 1 2 1 1 2 1 2 3 2 1 2 1 0 1 1
12.3.3.8.2 Chromatin organisation.histone modifications.histone lysine methylation.AOD group histone demethylase activities.lysine-specific demethylase (LDL3) 45 32 1 1 1 1 1 1 2 1 0 1 1 1 1 0 0 0 1 1 1 1 3 2 1 4 2 1 1 1 1 1 3 3 2 0 0 1 0 1 1
12.4.2.4 Chromatin organisation.chromatin remodeling complexes.additional core components.component ARP7 45 34 1 2 1 1 1 1 1 1 0 1 1 1 1 0 1 0 1 1 1 2 0 2 1 2 2 1 1 1 2 1 3 3 2 1 1 1 0 1 1
12.4.3.1 Chromatin organisation.chromatin remodeling complexes.INO80 chromatin remodeling complex.ATPase component Ino80 45 31 0 1 0 1 1 1 2 1 0 1 0 1 1 0 1 0 1 1 1 1 1 2 1 3 2 1 1 1 2 1 4 3 2 1 0 2 0 2 1
12.3.4.1 Chromatin organisation.histone modifications.histone arginine methylation.histone methylase (PRMT1) 44 31 1 2 1 2 1 1 1 1 1 2 1 1 1 0 1 0 1 1 1 0 0 1 1 2 2 1 1 2 2 2 3 3 2 1 0 0 0 0 1
12.3.6.3 Chromatin organisation.histone modifications.histone phosphorylation.protein kinase (Haspin) 44 36 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 2 1 1 1 2 1 2 3 2 1 0 1 0 1 1
12.4.1.4.2 Chromatin organisation.chromatin remodeling complexes.ATPase modules.SSO1653-like group.chromatin remodeling factor (Mot1) 44 35 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 0 1 2 1 2 1 2 1 1 1 1 1 1 2 1 4 3 1 1 0 1 0 1 1
12.5.1.15.2 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.non-canonical RdDM pathway.siRNA-binding factor (AGO2) 44 24 1 1 0 2 0 1 5 1 0 1 1 1 0 0 0 0 1 1 1 1 3 0 0 0 2 1 1 3 0 0 4 3 2 3 0 2 0 2 0
12.3.4.2 Chromatin organisation.histone modifications.histone arginine methylation.histone methylase (PRMT4) 43 30 1 1 1 2 1 1 1 1 1 0 1 1 2 0 0 0 1 1 1 0 0 0 1 2 2 1 1 2 2 1 4 3 2 1 0 2 0 1 1
12.4.2.3 Chromatin organisation.chromatin remodeling complexes.additional core components.component BAF47/INI1 43 32 1 1 1 1 1 1 3 1 0 1 1 1 1 0 1 0 1 1 1 1 0 0 1 0 1 1 1 3 2 1 4 3 2 1 1 1 0 1 1
12.4.4.1 Chromatin organisation.chromatin remodeling complexes.SWR1 histone variant exchanging complex.ATPase component PIE1 43 32 2 1 1 1 1 2 1 2 1 0 0 1 1 2 1 0 1 1 1 0 1 2 1 2 2 1 1 1 2 1 1 3 2 0 0 1 0 1 1
12.5.1.9 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.ssRNA polymerase (RDR2) 43 28 1 1 1 1 1 1 0 1 0 1 1 1 1 0 0 0 1 1 1 1 0 0 1 0 1 1 1 1 0 1 4 9 5 1 0 1 0 1 1
12.3.4.3.2 Chromatin organisation.histone modifications.histone arginine methylation.TDRD3-TOP3B methyl-arginine reader complex.topoisomerase component TOP3b 42 36 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 2 3 2 1 0 1 0 1 1
12.3.5.1.3 Chromatin organisation.histone modifications.histone ubiquitination.PRC1 histone mono-ubiquitination complex.LHP1-regulatory component ELP1 42 36 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 2 1 1 2 1 1 1 2 1 0 3 2 1 1 1 0 1 1
12.3.3.1.1.1 Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component MSI1 41 32 1 0 1 1 1 1 2 1 1 2 0 1 2 1 1 0 1 1 1 1 0 1 0 1 2 1 1 1 2 1 2 3 1 1 0 2 0 1 1
12.3.3.9.3 Chromatin organisation.histone modifications.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (JMJD6) 41 35 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 3 3 2 0 1 1 0 1 1
12.3.4.3.1 Chromatin organisation.histone modifications.histone arginine methylation.TDRD3-TOP3B methyl-arginine reader complex.reader component TDRD3 41 35 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 0 1 1 1 1 2 1 1 1 1 0 1 3 3 2 1 1 1 0 1 1
12.4.3.3 Chromatin organisation.chromatin remodeling complexes.INO80 chromatin remodeling complex.component ARP8 41 31 1 1 1 1 1 1 1 1 0 1 2 0 2 0 1 0 1 1 1 1 1 1 1 0 2 1 1 1 2 1 4 3 2 1 0 1 0 1 0
12.4.3.2 Chromatin organisation.chromatin remodeling complexes.INO80 chromatin remodeling complex.component ARP5 40 32 1 1 1 1 0 1 1 1 0 1 1 2 1 0 1 0 1 0 1 0 2 2 1 1 1 1 1 1 1 1 3 3 2 1 1 1 0 1 1
12.4.1.1.2 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Snf2-like group.chromatin remodeling factor (Chd1) 38 33 1 2 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 0 1 1 1 2 2 1 1 1 2 1 1 0 2 1 0 1 0 1 1
12.4.1.3.2 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Rad54-like group.chromatin remodeling factor (ATRX) 38 29 0 1 1 1 1 1 1 0 0 0 1 1 1 0 1 0 1 1 1 1 0 1 1 1 3 1 1 1 2 1 3 3 2 1 0 0 0 1 2
12.4.1.2 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Swr1-like group 37 29 0 1 1 1 1 1 0 1 0 1 0 1 1 0 1 0 1 1 0 1 0 1 1 3 1 1 1 1 2 1 3 3 2 1 0 1 0 1 1
12.4.1.2.1 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Swr1-like group.chromatin remodeling factor (Etl1) 37 29 0 1 1 1 1 1 0 1 0 1 0 1 1 0 1 0 1 1 0 1 0 1 1 3 1 1 1 1 2 1 3 3 2 1 0 1 0 1 1
12.4.1.3.1 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Rad54-like group.chromatin remodeling factor (Rad54) 37 28 0 1 0 1 1 1 1 0 2 0 1 1 1 2 1 0 1 1 1 1 0 0 1 3 1 1 1 1 4 1 0 3 1 0 0 1 0 1 1
12.5.1.12 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.ribonuclease (RTL2) 36 21 0 1 0 1 2 2 1 0 0 2 1 0 3 0 0 0 1 1 0 0 1 0 1 0 1 0 1 1 0 0 0 9 3 1 1 1 0 1 0
12.3.3.9.7 Chromatin organisation.histone modifications.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM11) 35 31 1 0 1 1 1 1 1 1 0 1 1 1 1 1 1 0 1 1 1 1 0 0 1 0 1 1 1 1 2 1 1 3 2 1 0 1 0 1 1
12.5.1.14.2 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.DNA methylation accessory complex (DDR).component DMS3 35 27 1 1 1 1 1 1 1 1 0 1 1 1 1 0 0 0 1 1 1 1 0 1 1 0 2 1 1 3 0 0 3 3 2 1 0 1 0 0 0
12.5.1.5 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.RNA polymerase-V auxiliary factor (KTF1/SPT5L) 35 29 1 1 0 1 1 1 1 1 0 1 1 1 1 0 0 0 1 1 1 1 1 1 1 0 2 1 1 1 0 1 0 3 2 1 0 2 0 2 1
12.5.1.10 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.RDR2-polymerase accessory protein (CLSY1/2) 34 26 1 1 1 2 1 1 0 1 0 0 1 1 1 0 0 0 1 1 1 0 2 0 1 0 2 1 2 1 0 0 2 3 2 1 1 1 0 1 0
12.5.1.16.2 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.downstream SUVH-DNAJ methylation reader complex.chaperone component DNAJ1/2 33 14 1 0 2 4 0 1 2 0 0 3 1 0 3 0 0 0 0 0 0 0 0 0 1 0 4 0 0 6 0 1 0 0 0 2 0 0 0 0 2
12.3.3.9.2 Chromatin organisation.histone modifications.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM5) 30 25 1 1 1 1 1 1 0 1 0 0 1 1 1 0 1 0 1 0 1 0 0 1 1 2 1 1 1 1 2 0 0 3 2 1 0 1 0 0 0
12.3.2.1.4.1 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.component HDA9 29 24 0 0 1 1 1 1 0 1 1 1 0 1 0 1 1 0 1 0 0 0 0 0 0 1 1 0 0 1 1 1 2 3 2 2 1 1 0 1 1
12.4.1.1.1 Chromatin organisation.chromatin remodeling complexes.ATPase modules.Snf2-like group.chromatin remodeling factor (Alc) 27 24 0 0 1 1 0 1 0 0 0 1 1 1 1 0 1 0 1 1 1 1 0 0 1 1 1 1 1 1 0 1 0 3 2 1 0 1 0 1 0
12.5.1.14.3 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.DNA methylation accessory complex (DDR).component RDM1 27 17 1 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 2 1 0 5 0 1 4 3 0 1 0 1 0 0 1
12.3.5.2.2 Chromatin organisation.histone modifications.histone ubiquitination.BAH-EMF1 Polycomb gene silencing complex.component EMF1 25 13 1 0 1 1 1 0 3 0 0 5 0 0 3 0 0 0 0 0 0 0 3 0 1 0 2 0 0 1 0 0 0 0 0 1 0 0 0 0 2
12.3.3.1.2.4 Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.associated protein factors.chromatin-silencing modulator (ALP1) 22 17 0 1 1 1 1 0 1 0 0 0 0 2 1 0 0 0 1 1 1 0 4 1 0 0 0 0 0 0 0 1 1 0 2 0 0 1 0 1 0
12.4.4.4 Chromatin organisation.chromatin remodeling complexes.SWR1 histone variant exchanging complex.component ARP6 16 11 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 4 3 0 0 1 0 1 0
12.5.3.2.3 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.ROS1-recruitment complex.component IDM2|IDM3 13 9 0 0 0 2 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 2 0 0 1 2 0 0 0 0 1 0 0 0 0 0
12.5.4.2 Chromatin organisation.DNA methylation.cytosine methylation reader activities.methylation reader (MBD5-6) 12 6 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 2 0 0 2 0 0 0 0 0 1 0 0 0 0 0
12.5.3.2.1 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.ROS1-recruitment complex.methylation reader component MBD7 4 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0