Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchChild MapMan terms
- Original MapMan term
- 6.2
- Description
- .Nucleotide metabolism.pyrimidines
- Type
- mapman
| MapMan | description | genes | species | ach | ahy | aip | aly | ath | atr | bol | bra | bvu | can | car | ccaj | ccan | ccl | cla | cme | col | cpa | cqu | cre | cru | csa | dca | egr | egut | fve | gma | gra | hbr | mco | mdo | mes | mpo | mtr | nnu | osa | pab | pax | pbr | ppa | ppe | ptr | rco | sly | smo | spa | stu | tca | tha | tpr | ugi | vra | vvi | zju | zma |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6.2.1 | .Nucleotide metabolism.pyrimidines.de novo biosynthesis | 645 | 54 | 10 | 0 | 14 | 11 | 11 | 8 | 19 | 18 | 9 | 15 | 13 | 13 | 8 | 11 | 9 | 10 | 9 | 8 | 20 | 7 | 12 | 9 | 12 | 9 | 10 | 10 | 25 | 13 | 17 | 6 | 15 | 11 | 7 | 14 | 14 | 13 | 8 | 9 | 16 | 14 | 12 | 14 | 10 | 8 | 12 | 12 | 10 | 9 | 15 | 13 | 9 | 14 | 10 | 12 | 18 |
| 6.2.4 | .Nucleotide metabolism.pyrimidines.catabolism | 510 | 54 | 8 | 0 | 8 | 15 | 16 | 7 | 16 | 16 | 7 | 8 | 9 | 12 | 11 | 7 | 8 | 8 | 6 | 8 | 14 | 5 | 11 | 8 | 6 | 8 | 12 | 8 | 20 | 14 | 10 | 4 | 8 | 9 | 6 | 11 | 12 | 9 | 8 | 10 | 7 | 9 | 10 | 13 | 8 | 7 | 6 | 9 | 7 | 7 | 10 | 14 | 5 | 9 | 8 | 9 | 9 |
| 6.2.2 | .Nucleotide metabolism.pyrimidines.salvage pathway | 288 | 54 | 7 | 0 | 5 | 6 | 6 | 4 | 9 | 9 | 3 | 6 | 5 | 5 | 5 | 4 | 3 | 4 | 4 | 5 | 5 | 3 | 6 | 3 | 6 | 5 | 5 | 4 | 12 | 8 | 7 | 2 | 9 | 4 | 2 | 5 | 4 | 5 | 4 | 4 | 4 | 7 | 4 | 6 | 4 | 6 | 3 | 7 | 4 | 5 | 7 | 8 | 4 | 6 | 8 | 6 | 6 |
| 6.2.3 | .Nucleotide metabolism.pyrimidines.phosphotransfers | 248 | 54 | 5 | 0 | 4 | 5 | 5 | 4 | 7 | 6 | 4 | 4 | 3 | 4 | 4 | 3 | 4 | 4 | 4 | 3 | 9 | 3 | 3 | 4 | 5 | 7 | 4 | 3 | 6 | 4 | 6 | 1 | 6 | 5 | 4 | 4 | 5 | 6 | 2 | 6 | 10 | 9 | 4 | 6 | 4 | 4 | 3 | 4 | 4 | 4 | 6 | 4 | 4 | 2 | 4 | 4 | 6 |
| 6.2.2.1 | .Nucleotide metabolism.pyrimidines.salvage pathway.uridine/cytidine kinase (UCK) | 224 | 54 | 7 | 0 | 4 | 5 | 5 | 3 | 7 | 8 | 2 | 4 | 4 | 5 | 4 | 3 | 2 | 3 | 3 | 3 | 3 | 2 | 5 | 2 | 4 | 4 | 3 | 3 | 10 | 7 | 6 | 1 | 6 | 3 | 1 | 4 | 3 | 4 | 3 | 3 | 2 | 6 | 3 | 5 | 3 | 4 | 2 | 6 | 3 | 4 | 6 | 7 | 3 | 5 | 7 | 5 | 4 |
| 6.2.1.6 | .Nucleotide metabolism.pyrimidines.de novo biosynthesis.CTP synthetase | 206 | 54 | 4 | 0 | 2 | 5 | 5 | 2 | 9 | 8 | 2 | 2 | 3 | 4 | 2 | 3 | 3 | 3 | 3 | 3 | 4 | 1 | 5 | 3 | 4 | 3 | 2 | 3 | 8 | 5 | 5 | 1 | 6 | 5 | 1 | 4 | 3 | 6 | 2 | 2 | 6 | 2 | 4 | 6 | 3 | 3 | 4 | 5 | 3 | 3 | 7 | 5 | 2 | 4 | 3 | 3 | 7 |
| 6.2.3.1 | .Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase | 192 | 54 | 5 | 0 | 3 | 3 | 4 | 3 | 5 | 4 | 3 | 3 | 2 | 3 | 3 | 3 | 3 | 3 | 4 | 2 | 7 | 3 | 3 | 3 | 4 | 6 | 3 | 2 | 4 | 3 | 5 | 1 | 6 | 4 | 3 | 3 | 4 | 5 | 1 | 4 | 8 | 7 | 3 | 5 | 3 | 3 | 2 | 3 | 3 | 3 | 4 | 3 | 3 | 2 | 3 | 3 | 4 |
| 6.2.1.1 | .Nucleotide metabolism.pyrimidines.de novo biosynthesis.carbamoyl phosphate synthetase heterodimer | 157 | 54 | 5 | 0 | 5 | 2 | 2 | 2 | 3 | 3 | 3 | 5 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 4 | 2 | 2 | 2 | 3 | 2 | 2 | 3 | 5 | 3 | 3 | 2 | 5 | 2 | 2 | 3 | 5 | 2 | 3 | 3 | 5 | 5 | 3 | 3 | 2 | 2 | 3 | 2 | 3 | 2 | 3 | 3 | 3 | 3 | 2 | 4 | 4 |
| 6.2.4.6 | .Nucleotide metabolism.pyrimidines.catabolism.alanine aminotransferase (PYD4) | 139 | 53 | 2 | 0 | 4 | 3 | 3 | 2 | 4 | 6 | 2 | 2 | 3 | 4 | 2 | 2 | 3 | 3 | 1 | 1 | 4 | 1 | 3 | 3 | 2 | 2 | 3 | 2 | 6 | 4 | 3 | 0 | 1 | 3 | 1 | 3 | 3 | 3 | 1 | 4 | 3 | 1 | 3 | 3 | 2 | 2 | 1 | 2 | 2 | 2 | 4 | 3 | 1 | 3 | 3 | 2 | 3 |
| 6.2.4.2 | .Nucleotide metabolism.pyrimidines.catabolism.cytidine deaminase | 113 | 52 | 1 | 0 | 0 | 8 | 9 | 1 | 7 | 4 | 1 | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 4 | 1 | 1 | 1 | 3 | 1 | 4 | 3 | 2 | 1 | 3 | 2 | 1 | 2 | 6 | 2 | 2 | 2 | 0 | 3 | 1 | 2 | 2 | 1 | 1 | 3 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 2 |
| 6.2.1.1.2 | .Nucleotide metabolism.pyrimidines.de novo biosynthesis.carbamoyl phosphate synthetase heterodimer.small subunit | 89 | 54 | 2 | 0 | 2 | 1 | 1 | 1 | 2 | 2 | 2 | 4 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 3 | 2 | 2 | 1 | 4 | 1 | 1 | 2 | 2 | 1 | 2 | 2 | 3 | 3 | 2 | 2 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | 2 | 1 | 2 | 2 |
| 6.2.1.5 | .Nucleotide metabolism.pyrimidines.de novo biosynthesis.UMP synthase | 86 | 53 | 0 | 0 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 4 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 4 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 3 | 2 | 2 | 1 | 2 | 1 | 1 | 3 | 1 | 2 | 1 | 2 | 1 | 2 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 3 | 2 | 2 | 3 |
| 6.2.1.2 | .Nucleotide metabolism.pyrimidines.de novo biosynthesis.aspartate transcarbamoylase | 75 | 53 | 1 | 0 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 4 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 5 | 1 | 2 | 1 | 0 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 2 | 3 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 |
| 6.2.4.4 | .Nucleotide metabolism.pyrimidines.catabolism.dihydopyrimidine aminohydrolase (PYD2) | 73 | 52 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 4 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 0 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 4 | 1 | 2 | 1 | 2 | 1 |
| 6.2.1.1.1 | .Nucleotide metabolism.pyrimidines.de novo biosynthesis.carbamoyl phosphate synthetase heterodimer.large subunit | 69 | 54 | 3 | 0 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 2 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 2 |
| 6.2.4.5 | .Nucleotide metabolism.pyrimidines.catabolism.beta-ureidopropionase (PYD3) | 68 | 54 | 2 | 0 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 3 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 2 | 1 |
| 6.2.2.2 | .Nucleotide metabolism.pyrimidines.salvage pathway.uracil phosphoribosyltransferase (UPP) | 64 | 52 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 |
| 6.2.1.3 | .Nucleotide metabolism.pyrimidines.de novo biosynthesis.dihydroorotase | 62 | 49 | 0 | 0 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 1 | 1 | 1 |
| 6.2.1.4 | .Nucleotide metabolism.pyrimidines.de novo biosynthesis.dihydroorotate dehydrogenase | 60 | 50 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 0 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 3 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| 6.2.4.3 | .Nucleotide metabolism.pyrimidines.catabolism.dihydropyrimidine dehydrogenase (PYD1) | 60 | 53 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| 6.2.4.1 | .Nucleotide metabolism.pyrimidines.catabolism.5'-nucleotidase | 57 | 47 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 0 | 1 | 1 | 0 | 1 | 1 | 2 | 3 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 2 | 3 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 |
| 6.2.3.2 | .Nucleotide metabolism.pyrimidines.phosphotransfers.plastidial UMP kinase (PUMPKIN) | 56 | 46 | 0 | 0 | 1 | 2 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 2 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 2 |