Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchChild MapMan terms
- Original MapMan term
- 16.8.1
- Description
- .RNA processing.RNA surveillance.exosome complex
- Type
- mapman
| MapMan | description | genes | species | ach | ahy | aip | aly | ath | atr | bol | bra | bvu | can | car | ccaj | ccan | ccl | cla | cme | col | cpa | cqu | cre | cru | csa | dca | egr | egut | fve | gma | gra | hbr | mco | mdo | mes | mpo | mtr | nnu | osa | pab | pax | pbr | ppa | ppe | ptr | rco | sly | smo | spa | stu | tca | tha | tpr | ugi | vra | vvi | zju | zma |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.8.1.2 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities | 913 | 54 | 13 | 0 | 17 | 17 | 17 | 15 | 23 | 23 | 17 | 12 | 14 | 16 | 16 | 16 | 17 | 16 | 16 | 14 | 30 | 9 | 17 | 15 | 19 | 15 | 15 | 17 | 28 | 19 | 17 | 7 | 22 | 16 | 16 | 17 | 10 | 18 | 10 | 18 | 28 | 12 | 16 | 22 | 15 | 19 | 19 | 16 | 12 | 15 | 19 | 20 | 13 | 15 | 17 | 18 | 23 |
| 16.8.1.1 | .RNA processing.RNA surveillance.exosome complex.EXO9 core complex | 613 | 54 | 13 | 0 | 9 | 13 | 11 | 9 | 11 | 12 | 11 | 13 | 14 | 14 | 14 | 11 | 9 | 10 | 10 | 7 | 22 | 7 | 13 | 8 | 11 | 12 | 9 | 11 | 25 | 12 | 15 | 8 | 15 | 10 | 9 | 14 | 11 | 11 | 4 | 9 | 14 | 9 | 12 | 15 | 9 | 10 | 8 | 9 | 10 | 11 | 14 | 16 | 8 | 8 | 9 | 9 | 15 |
| 16.8.1.2.3 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.Nuclear Exosome Targeting (NEXT) activation complex | 251 | 54 | 6 | 0 | 4 | 5 | 5 | 3 | 5 | 7 | 5 | 3 | 3 | 5 | 5 | 4 | 5 | 6 | 3 | 4 | 10 | 2 | 5 | 4 | 7 | 4 | 4 | 4 | 8 | 4 | 5 | 2 | 5 | 4 | 4 | 5 | 2 | 5 | 3 | 5 | 6 | 2 | 4 | 6 | 4 | 6 | 6 | 5 | 4 | 4 | 6 | 5 | 4 | 3 | 7 | 4 | 5 |
| 16.8.1.2.6 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.SUPERKILLER (SKI) regulation complex | 179 | 54 | 3 | 0 | 4 | 3 | 3 | 3 | 4 | 4 | 3 | 2 | 3 | 3 | 2 | 3 | 3 | 3 | 4 | 3 | 5 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 4 | 4 | 3 | 2 | 5 | 4 | 3 | 3 | 3 | 2 | 2 | 4 | 6 | 4 | 4 | 3 | 3 | 4 | 5 | 3 | 3 | 3 | 3 | 4 | 3 | 3 | 3 | 3 | 4 |
| 16.8.1.2.1 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.exoribonuclease (RRP6L) | 140 | 53 | 0 | 0 | 3 | 3 | 3 | 2 | 5 | 5 | 3 | 2 | 2 | 3 | 3 | 2 | 2 | 2 | 2 | 1 | 5 | 2 | 3 | 2 | 3 | 2 | 2 | 1 | 6 | 4 | 2 | 1 | 4 | 2 | 2 | 3 | 1 | 3 | 2 | 2 | 4 | 2 | 2 | 4 | 2 | 2 | 2 | 2 | 1 | 2 | 3 | 3 | 1 | 3 | 2 | 3 | 7 |
| 16.8.1.2.3.1 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.Nuclear Exosome Targeting (NEXT) activation complex.RNA helicase component MTR4/HEN2 | 119 | 53 | 1 | 0 | 2 | 2 | 2 | 2 | 2 | 4 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 3 | 1 | 2 | 4 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 1 | 2 | 0 | 3 | 3 | 2 | 2 | 3 | 2 | 3 | 2 | 2 | 3 | 2 | 3 | 3 | 2 | 1 | 3 | 3 | 2 |
| 16.8.1.1.5 | .RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP45 | 83 | 52 | 2 | 0 | 1 | 2 | 2 | 1 | 1 | 2 | 3 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 4 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 2 | 1 | 3 | 2 | 1 | 2 | 2 | 1 | 0 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 6 |
| 16.8.1.1.1 | .RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP40 | 81 | 53 | 2 | 0 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 2 | 5 | 2 | 4 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 3 | 1 | 2 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 4 | 2 | 1 | 1 | 1 | 1 | 2 |
| 16.8.1.1.7 | .RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP4 | 70 | 54 | 2 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 3 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 3 | 2 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 |
| 16.8.1.2.3.3 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.Nuclear Exosome Targeting (NEXT) activation complex.component ZCCHC8 | 70 | 47 | 4 | 0 | 1 | 2 | 2 | 1 | 2 | 2 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 0 | 2 | 1 | 2 | 1 | 1 | 1 | 3 | 1 | 2 | 0 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 1 | 1 | 2 | 2 | 0 | 1 | 2 | 1 | 1 | 1 | 2 | 0 | 1 |
| 16.8.1.1.2 | .RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP41 | 68 | 52 | 0 | 0 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 3 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 3 | 1 | 1 | 1 | 1 | 1 |
| 16.8.1.1.4 | .RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP43 | 66 | 50 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 0 | 1 | 4 | 1 | 1 | 3 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 3 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 |
| 16.8.1.2.4 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.RNA degradation surveillance factor (SOP1) | 65 | 52 | 1 | 0 | 2 | 2 | 1 | 1 | 2 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 0 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 |
| 16.8.1.2.6.3 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.SUPERKILLER (SKI) regulation complex.component SKI8 | 64 | 52 | 2 | 0 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| 16.8.1.1.9 | .RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component MTR3/RRP41L | 63 | 51 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 |
| 16.8.1.2.3.2 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.Nuclear Exosome Targeting (NEXT) activation complex.component RBM7 | 62 | 49 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 2 | 0 | 1 | 1 | 3 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 |
| 16.8.1.1.3 | .RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP42 | 62 | 50 | 2 | 0 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 0 | 2 | 1 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 1 |
| 16.8.1.1.6 | .RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP46 | 62 | 52 | 2 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| 16.8.1.2.7 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.EXO9-SUPERKILLER interaction factor (SKI7) | 62 | 46 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 3 | 2 | 2 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 3 | 1 | 2 | 3 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 0 | 1 | 2 | 1 | 0 | 1 | 1 | 1 | 2 |
| 16.8.1.2.6.1 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.SUPERKILLER (SKI) regulation complex.RNA helicase component SKI2 | 59 | 53 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 |
| 16.8.1.2.9 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.regulatory cofactor (RIPR) | 59 | 51 | 1 | 0 | 0 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 |
| 16.8.1.1.8 | .RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component CSL4 | 58 | 50 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| 16.8.1.2.6.2 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.SUPERKILLER (SKI) regulation complex.component SKI3 | 56 | 49 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 3 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 |
| 16.8.1.2.2 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.exoribonuclease (Dis3/RRP44) | 55 | 50 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| 16.8.1.2.5 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.poly(A) RNA polymerase (TRF4) | 54 | 51 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| 16.8.1.2.8 | .RNA processing.RNA surveillance.exosome complex.associated co-factor activities.regulatory cofactor (RST1) | 53 | 47 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 |