Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
LOC_Os08g24170	Oryza sativa ssp. japonica	HOM04D023204	ORTHO04D176332	4.2e-282	973.0	500	100.0
LOC_Os08g24140	Oryza sativa ssp. japonica	HOM04D023204	ORTHO04D185003	1.7e-190	668.7	426	80.5
LOC_Os08g23960	Oryza sativa ssp. japonica	HOM04D023204	ORTHO04D178977	5.0e-126	454.5	441	57.4
LOC_Os11g42230	Oryza sativa ssp. japonica	HOM04D009919	ORTHO04D013366	2.4e-27	126.7	444	30.6
LOC_Os11g33250	Oryza sativa ssp. japonica	HOM04D009919	ORTHO04D180296	1.4e-22	110.9	409	28.6
LOC_Os11g33190	Oryza sativa ssp. japonica	HOM04D009919	ORTHO04D013366	1.1e-19	101.3	399	28.6
LOC_Os11g33220	Oryza sativa ssp. japonica	HOM04D009919	ORTHO04D013366	1.4e-19	100.9	418	28.9
LOC_Os11g42240	Oryza sativa ssp. japonica	HOM04D009919	ORTHO04D177537	3.1e-19	99.8	425	28.9
LOC_Os08g24370	Oryza sativa ssp. japonica	HOM04D009919	ORTHO04D013366	1.0e-14	84.7	352	27.6
LOC_Os11g42300	Oryza sativa ssp. japonica	HOM04D009919	ORTHO04D013366	2.8e-12	76.6	359	27.6
LOC_Os04g16160	Oryza sativa ssp. japonica	HOM04D009919	ORTHO04D182016	6.3e-12	75.5	372	25.3
LOC_Os11g42270	Oryza sativa ssp. japonica	HOM04D009919	ORTHO04D013366	8.5e-09	65.1	128	35.2

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment