Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
COL.COLO4_08241	Corchorus olitorius	HOM04D016634	ORTHO04D019419	6.1e-67	256.1	116	100.0
COL.COLO4_28107	Corchorus olitorius	HOM04D016634	ORTHO04D019419	8.0e-51	202.6	110	85.5
COL.COLO4_21438	Corchorus olitorius	HOM04D016634	ORTHO04D019419	2.7e-30	134.4	106	56.6
COL.COLO4_35220	Corchorus olitorius	HOM04D012954	ORTHO04D012582	4.9e-24	113.6	96	56.2
COL.COLO4_03646	Corchorus olitorius	HOM04D016634	ORTHO04D019419	1.3e-13	79.0	41	85.4
COL.COLO4_21442	Corchorus olitorius	HOM04D009777	ORTHO04D011380	7.5e-09	63.2	71	36.6
MELO3C002331	Cucumis melo	HOM04D005136	ORTHO04D006481	2.2e-08	61.6	104	28.8
CAN.G472.30	Capsicum annuum	HOM04D005136	ORTHO04D006481	9.2e-07	56.2	106	29.2
C.cajan_40030.g	Cajanus cajan	HOM04D005136	ORTHO04D006481	9.2e-07	56.2	105	29.5
Cucsa.391740	Cucumis sativus L.	HOM04D005136	ORTHO04D006481	1.2e-06	55.8	89	27.0
CAN.G769.1	Capsicum annuum	HOM04D005136	ORTHO04D006481	2.7e-06	54.7	106	28.3
Solyc10g053890.1	Solanum lycopersicum	HOM04D005136	ORTHO04D006481	3.5e-06	54.3	108	26.9

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment