Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00150G00430	Physcomitrella patens	0.0	1943	952	100.00
PP00202G00300	Physcomitrella patens	0.0	1590	948	86.50
PP00210G00080	Physcomitrella patens	0.0	821	699	62.95
PP00103G00520	Physcomitrella patens	1e-129	427	1010	34.75
PP00039G00040	Physcomitrella patens	3e-67	239	482	35.89
PP00007G01600	Physcomitrella patens	5e-40	164	197	43.65
PP00022G00610	Physcomitrella patens	2e-39	153	179	43.58
PP00050G00380	Physcomitrella patens	2e-27	117	116	51.72
PP00113G00520	Physcomitrella patens	1e-17	92.8	427	31.62
PP00158G00650	Physcomitrella patens	1e-16	87.8	421	30.64
PP00095G00050	Physcomitrella patens	3e-16	87.8	690	26.23
PP00107G00710	Physcomitrella patens	2e-15	85.5	745	24.83
PP00017G01020	Physcomitrella patens	2e-14	82.0	707	23.34
AT1G69550	Arabidopsis thaliana	5e-14	80.9	345	32.17
PP00180G00520	Physcomitrella patens	9e-14	80.1	335	32.84
AT3G44670	Arabidopsis thaliana	2e-13	79.0	625	24.48
PP00176G00400	Physcomitrella patens	2e-13	78.6	326	31.29
PP00783G00010	Physcomitrella patens	3e-13	78.6	715	26.43
PP00017G00460	Physcomitrella patens	4e-13	77.8	370	29.73
PP00169G00480	Physcomitrella patens	2e-12	75.9	350	32.00
PP00385G00070	Physcomitrella patens	2e-12	75.5	485	30.52
PP00246G00780	Physcomitrella patens	3e-12	74.7	368	30.71
PP00226G00400	Physcomitrella patens	7e-12	73.9	722	23.55
AT5G44510	Arabidopsis thaliana	8e-12	73.6	614	25.08
ATR_00109G01290	Amborella trichopoda	1e-11	73.2	342	26.32
PP00105G00870	Physcomitrella patens	1e-11	73.2	357	29.69
phs211090	Phytophtora sojae	1e-11	72.8	471	25.05
PP00167G00420	Physcomitrella patens	1e-11	72.0	436	27.52
ATR_00010G03530	Amborella trichopoda	2e-11	72.8	454	27.53
PP00409G00040	Physcomitrella patens	2e-11	71.6	444	27.93
PP00202G00440	Physcomitrella patens	4e-11	71.6	430	30.23
PP00396G00110	Physcomitrella patens	4e-11	70.9	465	27.53
AT5G46450	Arabidopsis thaliana	5e-11	70.9	297	29.63
PP00022G00690	Physcomitrella patens	8e-11	66.2	106	33.96
AT3G25510	Arabidopsis thaliana	9e-11	70.5	578	24.57
PP00374G00040	Physcomitrella patens	1e-10	70.1	346	32.08
PP00004G01010	Physcomitrella patens	1e-10	69.3	472	28.60
PP00043G00020	Physcomitrella patens	2e-10	69.3	353	29.18
PP00035G00690	Physcomitrella patens	2e-10	68.9	443	29.35
PP00079G01050	Physcomitrella patens	3e-10	68.6	421	26.84
PP00248G00270	Physcomitrella patens	5e-10	66.6	391	28.90
PP00096G01080	Physcomitrella patens	5e-10	67.8	352	29.55
PP00382G00110	Physcomitrella patens	8e-10	66.6	523	27.72
AT5G17680	Arabidopsis thaliana	9e-10	67.0	759	22.79
AT2G14080	Arabidopsis thaliana	1e-09	66.6	766	22.85
AT4G16950	Arabidopsis thaliana	1e-09	66.6	356	27.25
AT5G44870	Arabidopsis thaliana	1e-09	66.2	164	34.76
PP00158G00610	Physcomitrella patens	2e-09	64.3	349	28.94
AT4G16920	Arabidopsis thaliana	2e-09	65.9	356	27.25
PP00037G00410	Physcomitrella patens	2e-09	64.7	404	29.46
ATR_00056G02020	Amborella trichopoda	3e-09	65.1	412	25.49
PP00345G00050	Physcomitrella patens	3e-09	65.1	399	29.82
PP00508G00080	Physcomitrella patens	3e-09	63.9	351	27.07
PP00002G01370	Physcomitrella patens	4e-09	63.9	361	28.53
phs195710	Phytophtora sojae	5e-09	63.2	187	27.27
AT5G45060	Arabidopsis thaliana	5e-09	64.7	561	24.60
ATR_00056G00620	Amborella trichopoda	6e-09	63.9	395	25.32
PP00107G00590	Physcomitrella patens	7e-09	64.3	349	29.80
PP00002G01560	Physcomitrella patens	9e-09	63.2	449	26.06
PP00002G01380	Physcomitrella patens	1e-08	62.4	354	29.66
PP00065G00590	Physcomitrella patens	1e-08	63.2	377	27.85
AT4G19050	Arabidopsis thaliana	1e-08	63.5	364	24.73
PP00107G00580	Physcomitrella patens	1e-08	63.2	370	29.46
PP00372G00260	Physcomitrella patens	1e-08	62.4	319	29.15
PP00035G00610	Physcomitrella patens	2e-08	62.0	421	27.55
PP00085G00390	Physcomitrella patens	3e-08	61.6	432	27.55
AT4G08450	Arabidopsis thaliana	3e-08	62.0	260	26.15
AT4G16890	Arabidopsis thaliana	3e-08	62.0	360	24.72
ccr11900	Chondrus crispus	9e-08	60.5	118	28.81
AT4G36150	Arabidopsis thaliana	9e-08	60.5	705	23.55
ATR_00085G00770	Amborella trichopoda	1e-07	60.5	778	23.14
PP00039G01730	Physcomitrella patens	1e-07	58.9	373	26.27
AT1G56540	Arabidopsis thaliana	2e-07	59.7	505	24.55
ATR_00001G05750	Amborella trichopoda	2e-07	59.7	732	21.04
ccr160980	Chondrus crispus	2e-07	59.7	163	28.22
OS10G04120	Oryza sativa	2e-07	59.3	277	28.88
ccr40160	Chondrus crispus	2e-07	59.7	108	31.48
ccr21100	Chondrus crispus	2e-07	59.7	163	28.22
PP00214G00320	Physcomitrella patens	2e-07	58.9	326	29.14
ccr45580	Chondrus crispus	3e-07	58.9	113	30.97
PP00107G00560	Physcomitrella patens	3e-07	58.5	427	26.93
ccr12080	Chondrus crispus	3e-07	58.9	113	30.97
AT1G17600	Arabidopsis thaliana	3e-07	58.5	151	30.46
AT5G51630	Arabidopsis thaliana	4e-07	58.5	600	24.83
AT2G17050	Arabidopsis thaliana	4e-07	58.5	694	23.34
AT1G72840	Arabidopsis thaliana	4e-07	58.2	153	29.41
AA0089G00020	Aureococcus anophagefferens	4e-07	55.8	217	29.95
ccr17700	Chondrus crispus	5e-07	58.2	108	30.56
ccr54060	Chondrus crispus	5e-07	57.8	163	28.22
PP00145G00420	Physcomitrella patens	6e-07	57.8	180	25.56
AT4G27190	Arabidopsis thaliana	6e-07	57.8	670	24.03
PP00107G00470	Physcomitrella patens	6e-07	57.0	402	28.11
AA0008G03500	Aureococcus anophagefferens	6e-07	57.0	511	28.38
PP00372G00310	Physcomitrella patens	8e-07	57.4	423	28.84
AT5G45200	Arabidopsis thaliana	9e-07	57.0	159	31.45
PP00040G00800	Physcomitrella patens	1e-06	56.6	375	29.87
PP01097G00010	Physcomitrella patens	1e-06	56.2	359	29.81
PP00005G00130	Physcomitrella patens	1e-06	56.6	210	29.52
PP00107G00530	Physcomitrella patens	2e-06	55.8	343	29.45
ATR_00044G00960	Amborella trichopoda	2e-06	54.3	188	30.32
AT3G44480	Arabidopsis thaliana	2e-06	55.8	686	24.05
AT5G48770	Arabidopsis thaliana	2e-06	55.8	148	29.05
AT4G12010	Arabidopsis thaliana	2e-06	55.8	657	22.22
PP00024G00040	Physcomitrella patens	2e-06	55.8	168	32.74
PP00523G00100	Physcomitrella patens	3e-06	55.8	210	29.05
PP00104G00270	Physcomitrella patens	3e-06	55.5	329	27.96
PP00814G00010	Physcomitrella patens	4e-06	53.9	353	29.75
PP00074G01290	Physcomitrella patens	4e-06	53.9	209	29.67
AT5G45510	Arabidopsis thaliana	4e-06	55.1	269	27.51
AT1G72950	Arabidopsis thaliana	4e-06	53.9	190	25.26
OS01G57310	Oryza sativa	6e-06	54.7	246	28.05
OS01G57280	Oryza sativa	6e-06	54.7	246	28.05
PP00880G00010	Physcomitrella patens	6e-06	54.7	374	29.41
AT5G11250	Arabidopsis thaliana	6e-06	54.3	147	23.81
ATR_00010G03480	Amborella trichopoda	7e-06	54.3	373	27.61
ccr25300	Chondrus crispus	7e-06	54.3	122	28.69
ccr33360	Chondrus crispus	7e-06	54.3	109	28.44
OS01G57340	Oryza sativa	7e-06	54.3	252	29.37
CNC64A_007G02710	Chlorella sp NC64A	7e-06	53.9	354	27.97
PP00044G00430	Physcomitrella patens	8e-06	53.1	423	26.00
AT3G51570	Arabidopsis thaliana	8e-06	53.9	183	31.15
AT5G38344	Arabidopsis thaliana	8e-06	51.6	151	25.17
AT5G45250	Arabidopsis thaliana	9e-06	53.9	174	29.89

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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