Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Interactive Phylogenetics Module

Gene Id: OS12G37660

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS12G37660	Oryza sativa	0.0	853	415	100.00
OS11G45720	Oryza sativa	3e-160	468	368	62.23
OS11G45730	Oryza sativa	6e-159	465	399	57.39
PP00118G00140	Physcomitrella patens	1e-91	289	305	47.21
OS07G41650	Oryza sativa	1e-90	285	299	48.16
ATR_00056G01410	Amborella trichopoda	1e-88	280	293	47.78
PP00055G00770	Physcomitrella patens	1e-87	279	301	45.85
ATR_00028G00190	Amborella trichopoda	1e-86	274	316	43.99
OS01G53990	Oryza sativa	4e-85	271	369	40.11
AT5G19730	Arabidopsis thaliana	1e-84	270	336	42.56
ATR_00007G03430	Amborella trichopoda	8e-84	267	345	42.03
OS04G46740	Oryza sativa	2e-83	266	306	43.14
PP00067G00390	Physcomitrella patens	6e-83	268	301	45.51
PP00236G00340	Physcomitrella patens	1e-82	265	328	43.60
PP00236G00370	Physcomitrella patens	1e-82	265	328	43.60
AT5G55590	Arabidopsis thaliana	2e-82	264	302	44.70
OS05G44600	Oryza sativa	6e-82	264	292	44.52
PP00175G00080	Physcomitrella patens	1e-81	261	316	46.84
PP00023G00650	Physcomitrella patens	3e-81	262	301	44.19
AT5G47500	Arabidopsis thaliana	1e-80	259	301	41.86
AT5G61680	Arabidopsis thaliana	1e-79	256	307	44.95
PP00045G01090	Physcomitrella patens	5e-79	254	303	44.88
PP00112G00630	Physcomitrella patens	8e-79	255	300	44.67
PP00059G01430	Physcomitrella patens	1e-77	252	296	43.92
AT1G69940	Arabidopsis thaliana	1e-77	251	322	42.86
AT5G07430	Arabidopsis thaliana	2e-77	251	336	39.58
PP00081G01220	Physcomitrella patens	2e-77	251	300	45.67
AT5G07420	Arabidopsis thaliana	8e-77	249	335	39.10
PP00035G00530	Physcomitrella patens	2e-76	249	356	40.17
AT5G07410	Arabidopsis thaliana	9e-76	246	322	42.24
ATR_00106G00610	Amborella trichopoda	1e-74	243	306	40.85
PP00003G01970	Physcomitrella patens	1e-73	242	303	42.90
PP00215G00220	Physcomitrella patens	1e-73	241	340	40.00
PP00198G00170	Physcomitrella patens	3e-71	244	324	41.98
PP00112G00650	Physcomitrella patens	1e-70	233	317	40.69
PP00035G00160	Physcomitrella patens	6e-70	232	319	40.13
OS08G10604	Oryza sativa	9e-70	232	338	39.05
PP00227G00060	Physcomitrella patens	2e-69	230	346	39.60
PP00067G00020	Physcomitrella patens	3e-69	229	331	41.09
PP00461G00040	Physcomitrella patens	1e-68	228	345	39.13
AT2G36700	Arabidopsis thaliana	5e-68	225	298	40.60
PP00446G00020	Physcomitrella patens	6e-68	228	379	38.79
ATR_00027G01600	Amborella trichopoda	3e-67	222	241	47.72
AT1G05310	Arabidopsis thaliana	3e-66	223	307	40.39
AT2G36710	Arabidopsis thaliana	4e-66	223	299	40.80
PP00067G00680	Physcomitrella patens	6e-66	221	301	41.53
AT2G21610	Arabidopsis thaliana	1e-64	217	304	39.80
PP00236G00310	Physcomitrella patens	5e-64	216	294	39.80
ATR_00123G00030	Amborella trichopoda	5e-63	214	321	36.14
OS09G39760	Oryza sativa	7e-62	211	307	39.09
AT3G29090	Arabidopsis thaliana	1e-60	206	299	40.47
AT3G17060	Arabidopsis thaliana	1e-59	204	319	36.99
PP00129G00450	Physcomitrella patens	1e-58	200	299	38.13
OS10G26680	Oryza sativa	2e-58	200	297	38.72
PP00112G00540	Physcomitrella patens	5e-58	201	291	38.83
ATR_00007G03440	Amborella trichopoda	6e-58	195	207	47.83
OS01G44340	Oryza sativa	7e-58	198	303	37.29
PP00325G00260	Physcomitrella patens	3e-54	191	309	36.25
PP00341G00330	Physcomitrella patens	6e-54	189	292	38.70
PP00035G00330	Physcomitrella patens	6e-51	185	311	36.98
PP00014G01990	Physcomitrella patens	6e-51	183	326	34.36
AT3G06830	Arabidopsis thaliana	6e-51	186	330	35.76
PP00118G00270	Physcomitrella patens	9e-50	180	304	37.17
AT5G49180	Arabidopsis thaliana	9e-50	182	331	36.25
AT2G47280	Arabidopsis thaliana	3e-49	176	322	35.09
OS03G19610	Oryza sativa	5e-48	173	319	33.23
AT3G24130	Arabidopsis thaliana	7e-48	172	313	34.19
AT5G18990	Arabidopsis thaliana	3e-47	171	319	34.17
OS11G43830	Oryza sativa	3e-47	170	175	46.86
ATR_00003G02370	Amborella trichopoda	4e-47	175	317	35.02
ATR_00129G00420	Amborella trichopoda	1e-46	174	313	36.42
OS01G19440	Oryza sativa	2e-46	168	305	37.05
ATR_00021G02540	Amborella trichopoda	3e-45	170	335	33.43
AT5G09760	Arabidopsis thaliana	5e-45	169	319	33.54
ATR_00129G00080	Amborella trichopoda	2e-44	167	361	32.96
AT2G26440	Arabidopsis thaliana	2e-44	167	313	35.14
AT3G05620	Arabidopsis thaliana	5e-44	166	304	35.86
AT5G27870	Arabidopsis thaliana	5e-44	167	313	33.23
ATR_00129G00200	Amborella trichopoda	7e-44	166	373	32.98
OS06G09340	Oryza sativa	1e-43	165	314	33.76
AT1G11580	Arabidopsis thaliana	2e-43	164	319	34.17
AT2G47030	Arabidopsis thaliana	4e-43	164	314	34.08
AT5G64640	Arabidopsis thaliana	4e-43	164	313	32.59
AT1G11590	Arabidopsis thaliana	5e-43	163	327	33.94
AT3G05610	Arabidopsis thaliana	1e-42	163	313	33.23
AT2G19150	Arabidopsis thaliana	2e-42	158	323	31.58
AT5G53370	Arabidopsis thaliana	2e-42	162	336	33.93
PP00032G00150	Physcomitrella patens	3e-42	161	313	34.50
AT2G47040	Arabidopsis thaliana	3e-42	161	315	33.65
OS08G34900	Oryza sativa	3e-42	161	327	33.03
OS01G57854	Oryza sativa	4e-42	160	346	31.79
AT3G27980	Arabidopsis thaliana	6e-42	159	318	33.33
AT3G59010	Arabidopsis thaliana	1e-41	159	334	33.83
ATR_00010G01230	Amborella trichopoda	1e-41	159	356	33.71
ATR_00007G00590	Amborella trichopoda	5e-41	157	337	33.23
OS04G38560	Oryza sativa	7e-41	157	355	31.27
AT5G04960	Arabidopsis thaliana	1e-40	157	318	35.22
ATR_00105G00410	Amborella trichopoda	1e-40	153	320	31.25
OS01G15039	Oryza sativa	2e-40	156	306	33.01
ATR_00002G02630	Amborella trichopoda	2e-40	155	343	31.78
OS04G54850	Oryza sativa	2e-40	158	313	32.27
AT3G60730	Arabidopsis thaliana	2e-40	155	317	34.38
PP00096G00250	Physcomitrella patens	3e-40	155	318	31.76
ATR_00003G00820	Amborella trichopoda	5e-40	154	324	32.72
AT4G03930	Arabidopsis thaliana	6e-40	154	315	33.33
AT3G49220	Arabidopsis thaliana	9e-40	154	319	33.86
AT4G33230	Arabidopsis thaliana	1e-39	154	313	33.55
AT3G43270	Arabidopsis thaliana	1e-39	153	317	33.75
AT3G14300	Arabidopsis thaliana	2e-39	155	326	33.74
AT3G62170	Arabidopsis thaliana	2e-39	153	315	34.29
ATR_00129G00220	Amborella trichopoda	2e-39	152	317	33.12
AT1G53830	Arabidopsis thaliana	2e-39	152	328	33.84
AT4G15980	Arabidopsis thaliana	3e-39	153	316	32.91
OS01G21034	Oryza sativa	6e-39	150	385	31.95
PP00216G00060	Physcomitrella patens	6e-39	152	307	34.53
AT1G53840	Arabidopsis thaliana	7e-39	151	309	32.36
OS07G46190	Oryza sativa	8e-39	147	271	36.53
OS02G18650	Oryza sativa	8e-39	151	323	32.20
AT2G26450	Arabidopsis thaliana	8e-39	151	312	32.05
AT3G10710	Arabidopsis thaliana	1e-38	150	317	35.02
PP00076G00500	Physcomitrella patens	3e-38	149	313	30.35
OS04G35770	Oryza sativa	3e-38	149	313	31.95
PP00095G00350	Physcomitrella patens	4e-38	149	314	33.12
AT3G14310	Arabidopsis thaliana	5e-38	149	317	32.81
PP00258G00150	Physcomitrella patens	6e-38	149	317	32.49
ATR_00129G00130	Amborella trichopoda	8e-38	148	316	32.59
ATR_00071G00820	Amborella trichopoda	9e-38	148	320	33.12
ATR_00129G00460	Amborella trichopoda	1e-37	148	316	33.86
OS01G65790	Oryza sativa	1e-37	147	312	31.41
AT4G00190	Arabidopsis thaliana	3e-37	146	316	34.49
PP00149G01070	Physcomitrella patens	3e-37	146	313	31.95
ATR_00038G00150	Amborella trichopoda	3e-37	146	317	32.18
AT1G23200	Arabidopsis thaliana	4e-37	146	338	31.95
AT1G11370	Arabidopsis thaliana	4e-37	142	257	35.41
PP00382G00100	Physcomitrella patens	5e-37	145	322	33.23
OS07G47830	Oryza sativa	8e-37	145	318	33.33
PP00378G00080	Physcomitrella patens	9e-37	145	316	31.33
AT2G43050	Arabidopsis thaliana	1e-36	144	355	31.27
OS09G26360	Oryza sativa	1e-36	145	317	31.23
AT5G26810	Arabidopsis thaliana	1e-36	140	196	41.33
AT4G33220	Arabidopsis thaliana	2e-36	144	332	32.23
PP00026G00180	Physcomitrella patens	2e-36	144	308	30.84
ATR_00129G00450	Amborella trichopoda	3e-36	144	342	31.29
ATR_00040G01820	Amborella trichopoda	4e-36	143	311	30.23
OS02G46310	Oryza sativa	1e-35	137	271	34.32
OS11G07090	Oryza sativa	1e-35	142	352	31.25
AT4G02330	Arabidopsis thaliana	2e-35	141	318	30.50
OS01G13320	Oryza sativa	2e-35	141	332	31.93
ATR_00129G00440	Amborella trichopoda	6e-35	140	313	31.31
AT3G10720	Arabidopsis thaliana	2e-34	139	378	29.37
AT5G04970	Arabidopsis thaliana	3e-34	138	308	32.79
OS02G54190	Oryza sativa	4e-34	137	286	34.62
ATR_00003G02420	Amborella trichopoda	5e-34	137	314	31.21
OS07G49100	Oryza sativa	7e-34	136	331	29.31
OS01G20980	Oryza sativa	1e-33	135	334	30.54
ATR_00010G05400	Amborella trichopoda	2e-33	132	209	38.76
PP00033G00080	Physcomitrella patens	2e-33	135	308	29.87
AT2G45220	Arabidopsis thaliana	2e-33	134	329	33.13
ATR_00040G02900	Amborella trichopoda	3e-33	135	322	30.12
AT4G02300	Arabidopsis thaliana	8e-33	133	340	30.59
PP00035G01530	Physcomitrella patens	1e-32	132	320	27.81
OS11G36240	Oryza sativa	2e-32	130	318	31.45
ATR_00129G00110	Amborella trichopoda	2e-32	132	322	30.12
OS08G34910	Oryza sativa	3e-32	133	317	30.91
AT1G02810	Arabidopsis thaliana	4e-32	131	316	30.70
AT5G51490	Arabidopsis thaliana	6e-32	130	325	31.08
AT4G02320	Arabidopsis thaliana	7e-32	130	314	31.85
OS11G08750	Oryza sativa	7e-32	129	314	29.30
OS08G12410	Oryza sativa	1e-31	128	316	27.85
PP00151G00090	Physcomitrella patens	3e-31	129	317	30.91
OS05G29790	Oryza sativa	7e-31	128	348	30.17
OS03G18860	Oryza sativa	9e-31	127	315	28.89
ATR_00129G00140	Amborella trichopoda	2e-30	122	230	35.65
AT5G51500	Arabidopsis thaliana	4e-29	122	331	30.51
ATR_00007G03450	Amborella trichopoda	8e-29	115	146	43.84
AT3G47400	Arabidopsis thaliana	1e-28	122	316	30.38
AT2G47550	Arabidopsis thaliana	2e-28	120	335	28.66
ATR_00003G00500	Amborella trichopoda	1e-27	111	136	39.71
phs244740	Phytophtora sojae	2e-27	115	324	28.09
OS03G28090	Oryza sativa	4e-27	117	324	29.63
phs43770	Phytophtora sojae	1e-25	110	305	28.85
phs351340	Phytophtora sojae	1e-25	110	293	27.30
phs233890	Phytophtora sojae	3e-25	108	288	28.82
phs377630	Phytophtora sojae	5e-25	108	279	25.45
phs350300	Phytophtora sojae	2e-24	106	287	27.18
AT5G20860	Arabidopsis thaliana	3e-24	108	296	29.73
phs377550	Phytophtora sojae	2e-23	103	290	25.52
ATR_00116G00020	Amborella trichopoda	7e-23	99.4	142	35.92
phs30840	Phytophtora sojae	2e-22	100	290	27.24
phs377650	Phytophtora sojae	7e-22	97.8	182	32.97
ATR_00140G00090	Amborella trichopoda	4e-20	90.5	124	36.29
ATR_00102G00520	Amborella trichopoda	7e-20	90.9	131	41.22
phs292960	Phytophtora sojae	6e-19	90.9	259	25.87
phs30800	Phytophtora sojae	1e-18	90.1	259	25.87
phs377530	Phytophtora sojae	3e-18	88.6	299	23.08
OS09G37360	Oryza sativa	6e-18	87.4	306	29.08
phs196830	Phytophtora sojae	6e-18	85.9	195	31.79
PP00261G00180	Physcomitrella patens	2e-17	84.0	136	41.91
ATR_00038G01560	Amborella trichopoda	2e-16	79.0	76	48.68
phs30880	Phytophtora sojae	3e-14	76.6	286	23.08
phs233870	Phytophtora sojae	2e-13	73.9	281	25.62
PP00318G00210	Physcomitrella patens	4e-13	74.3	314	27.39
AT1G44980	Arabidopsis thaliana	5e-13	72.4	175	26.29
ATR_00147G00580	Amborella trichopoda	1e-12	70.1	124	35.48
phs43750	Phytophtora sojae	2e-11	68.6	287	22.65
phs30940	Phytophtora sojae	3e-10	63.2	146	30.82
ATR_00033G02140	Amborella trichopoda	5e-10	62.4	147	31.97
ATR_00041G00140	Amborella trichopoda	2e-09	60.8	159	27.04
OS11G43840	Oryza sativa	2e-09	58.9	51	52.94
ATR_00052G01010	Amborella trichopoda	2e-07	54.7	116	35.34
OS04G43370	Oryza sativa	5e-07	53.1	72	36.11
ATR_00120G00370	Amborella trichopoda	1e-06	52.4	130	30.00
PP04103G00010	Physcomitrella patens	3e-06	51.6	189	25.93
ATR_00024G01900	Amborella trichopoda	8e-06	48.5	54	42.59

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment